RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 COPS9Q8WXC6 57 aa7.69□□□□□ -1.18
SS18-202ENST00000269138 PPDPFQ9H3Y8 114 aa7.69□□□□□ -1.18
SS18-202ENST00000269138 LINC00518Q8N0U6 118 aa7.68□□□□□ -1.18
SS18-202ENST00000269138 J3QL48 77 aa7.68□□□□□ -1.18
SS18-202ENST00000269138 C2orf91Q6ZV80 131 aa7.68□□□□□ -1.18
SS18-202ENST00000269138 TRAV23DV6A0A075B6W5 121 aa7.67□□□□□ -1.18
SS18-202ENST00000269138 KRTAP1-4P0C5Y4 121 aa7.67□□□□□ -1.18
SS18-202ENST00000269138 MT1HL1P0DM35 61 aa7.67□□□□□ -1.18
SS18-202ENST00000269138 LINC01600Q96MT4 127 aa7.67□□□□□ -1.18
SS18-202ENST00000269138 HIST1H4GQ99525 98 aa7.67□□□□□ -1.18
SS18-202ENST00000269138 ETDCA0A1B0GVM5 59 aa7.66□□□□□ -1.18
SS18-202ENST00000269138 A4D1N5 150 aa7.66□□□□□ -1.18
SS18-202ENST00000269138 S100A12P80511 92 aa7.66□□□□□ -1.18
SS18-202ENST00000269138 HIGD1BQ9P298 99 aa7.66□□□□□ -1.18
SS18-202ENST00000269138 B5MCH6 92 aa7.65□□□□□ -1.18
SS18-202ENST00000269138 HIGD2AQ9BW72 106 aa7.65□□□□□ -1.18
SS18-202ENST00000269138 A6NDN8 102 aa7.64□□□□□ -1.19
SS18-202ENST00000269138 ZNF73O43830 326 aaPredicted RBP7.64□□□□□ -1.19
SS18-202ENST00000269138 DMBT1Q9UGM3 2413 aaPredicted RBP7.64□□□□□ -1.19
SS18-202ENST00000269138 LOC105371267A0A1B0GV96 52 aa7.63□□□□□ -1.19
SS18-202ENST00000269138 KRTAP10-8P60410 259 aa7.62□□□□□ -1.19
SS18-202ENST00000269138 PRR26Q8N8Z3 221 aa7.62□□□□□ -1.19
SS18-202ENST00000269138 SMCR5Q8TEV8 140 aa7.62□□□□□ -1.19
SS18-202ENST00000269138 C12orf57Q99622 126 aa7.62□□□□□ -1.19
SS18-202ENST00000269138 ANAPC11Q9NYG5 84 aa7.62□□□□□ -1.19
SS18-202ENST00000269138 Q9BRP9 147 aa7.62□□□□□ -1.19
SS18-202ENST00000269138 TRAV13-2A0A0B4J235 113 aa7.61□□□□□ -1.19
SS18-202ENST00000269138 ERC2-IT1O76042 136 aa7.61□□□□□ -1.19
SS18-202ENST00000269138 Q6ZRX8 168 aa7.61□□□□□ -1.19
SS18-202ENST00000269138 CBY1Q9Y3M2 126 aa7.61□□□□□ -1.19
SS18-202ENST00000269138 C6orf99Q4VX62 202 aa7.6□□□□□ -1.19
SS18-202ENST00000269138 PRO1933Q9H354 126 aa7.59□□□□□ -1.19
SS18-202ENST00000269138 UQCR10Q9UDW1 63 aa7.59□□□□□ -1.19
SS18-202ENST00000269138 SMIM6P0DI80 62 aa7.58□□□□□ -1.2
SS18-202ENST00000269138 TAL2Q16559 108 aa7.58□□□□□ -1.2
SS18-202ENST00000269138 CEND1Q8N111 149 aa7.58□□□□□ -1.2
SS18-202ENST00000269138 SMIM11BQ8TCY0 68 aa7.58□□□□□ -1.2
SS18-202ENST00000269138 TNXBP22105 4242 aa7.58□□□□□ -1.2
SS18-202ENST00000269138 A0A087X002 238 aa7.57□□□□□ -1.2
SS18-202ENST00000269138 CFC1BP0CG36 223 aa7.57□□□□□ -1.2
SS18-202ENST00000269138 CFC1P0CG37 223 aa7.57□□□□□ -1.2
SS18-202ENST00000269138 HINT1P49773 126 aaPredicted RBP7.57□□□□□ -1.2
SS18-202ENST00000269138 SPRR4Q96PI1 79 aa7.57□□□□□ -1.2
SS18-202ENST00000269138 COX7BP24311 80 aa7.57□□□□□ -1.2
SS18-202ENST00000269138 RPL13AP40429 203 aaKnown RBP7.57□□□□□ -1.2
SS18-202ENST00000269138 FXYD2P54710 66 aa7.56□□□□□ -1.2
SS18-202ENST00000269138 ELOF1P60002 83 aaKnown RBP7.56□□□□□ -1.2
SS18-202ENST00000269138 TRBV7-6A0A0J9YX20 115 aa7.54□□□□□ -1.2
SS18-202ENST00000269138 CRYGAP11844 174 aa7.54□□□□□ -1.2
SS18-202ENST00000269138 HSD52Q0P140 79 aa7.54□□□□□ -1.2
SS18-202ENST00000269138 KRTAP13-2Q52LG2 175 aa7.54□□□□□ -1.2
SS18-202ENST00000269138 H7C2G1 150 aa7.53□□□□□ -1.2
SS18-202ENST00000269138 HERC1Q15751 4861 aa7.53□□□□□ -1.2
SS18-202ENST00000269138 FAM229BQ4G0N7 80 aa7.53□□□□□ -1.2
SS18-202ENST00000269138 ST20-AS1Q8NBB2 130 aa7.53□□□□□ -1.2
SS18-202ENST00000269138 RAB37Q96AX2 223 aa7.53□□□□□ -1.2
SS18-202ENST00000269138 ZNF706Q9Y5V0 76 aaPredicted RBP7.53□□□□□ -1.2
SS18-202ENST00000269138 A0A0B4J2C4 111 aa7.52□□□□□ -1.2
SS18-202ENST00000269138 A0A1B0GWB2 263 aa7.52□□□□□ -1.2
SS18-202ENST00000269138 GAGE2AQ6NT46 116 aa7.52□□□□□ -1.2
SS18-202ENST00000269138 DHRS4-AS1Q9P1J3 65 aa7.52□□□□□ -1.2
SS18-202ENST00000269138 TMEM238LA0A1B0GVL6 79 aa7.51□□□□□ -1.21
SS18-202ENST00000269138 A6NJY4 79 aa7.51□□□□□ -1.21
SS18-202ENST00000269138 LINC00483Q53H64 154 aa7.51□□□□□ -1.21
SS18-202ENST00000269138 C3orf22Q8N5N4 141 aa7.51□□□□□ -1.21
SS18-202ENST00000269138 TYMSOSQ8TAI1 123 aa7.5□□□□□ -1.21
SS18-202ENST00000269138 NHP2Q9NX24 153 aaKnown RBP7.49□□□□□ -1.21
SS18-202ENST00000269138 K7ERJ3 54 aa7.48□□□□□ -1.21
SS18-202ENST00000269138 VAMP3Q15836 100 aa7.48□□□□□ -1.21
SS18-202ENST00000269138 BVES-AS1Q5T3Y7 98 aa7.48□□□□□ -1.21
SS18-202ENST00000269138 PRO1854Q9UHT4 67 aa7.48□□□□□ -1.21
SS18-202ENST00000269138 CTAG1AP78358 180 aa7.47□□□□□ -1.21
SS18-202ENST00000269138 LINC00575Q6W349 94 aa7.47□□□□□ -1.21
SS18-202ENST00000269138 Q1RN00 199 aa7.46□□□□□ -1.22
SS18-202ENST00000269138 DEFB105AQ8NG35 78 aa7.46□□□□□ -1.22
SS18-202ENST00000269138 IGLV9-49A0A0B4J1Y8 123 aa7.44□□□□□ -1.22
SS18-202ENST00000269138 SPRR1BP22528 89 aa7.44□□□□□ -1.22
SS18-202ENST00000269138 TSTD3H0UI37 97 aa7.43□□□□□ -1.22
SS18-202ENST00000269138 SLC25A20O43772 301 aa7.43□□□□□ -1.22
SS18-202ENST00000269138 LINC01547P58512 204 aaPredicted RBP7.43□□□□□ -1.22
SS18-202ENST00000269138 hADV29S1A0JD25 119 aa7.42□□□□□ -1.22
SS18-202ENST00000269138 TSPAN13O95857 204 aa7.42□□□□□ -1.22
SS18-202ENST00000269138 MOBPQ13875 183 aa7.42□□□□□ -1.22
SS18-202ENST00000269138 TRIAP1O43715 76 aa7.42□□□□□ -1.22
SS18-202ENST00000269138 LINC00304Q8N9R0 145 aa7.42□□□□□ -1.22
SS18-202ENST00000269138 FAM218AQ96MZ4 157 aa7.42□□□□□ -1.22
SS18-202ENST00000269138 IGLV5-48A0A075B6I7 105 aa7.41□□□□□ -1.22
SS18-202ENST00000269138 TEX49A0A1B0GTD5 131 aa7.41□□□□□ -1.22
SS18-202ENST00000269138 Q8NBF4 154 aa7.41□□□□□ -1.22
SS18-202ENST00000269138 Q6ZQY7 126 aa7.4□□□□□ -1.22
SS18-202ENST00000269138 SMIM29Q86T20 159 aa7.4□□□□□ -1.22
SS18-202ENST00000269138 Q8N377 158 aa7.4□□□□□ -1.22
SS18-202ENST00000269138 H0YGX0 51 aa7.39□□□□□ -1.23
SS18-202ENST00000269138 M0R143 59 aa7.39□□□□□ -1.23
SS18-202ENST00000269138 C9orf153Q5TBE3 101 aa7.39□□□□□ -1.23
SS18-202ENST00000269138 LAMTOR3Q9UHA4 124 aa7.38□□□□□ -1.23
SS18-202ENST00000269138 PSMB2P49721 201 aa7.37□□□□□ -1.23
SS18-202ENST00000269138 SSBP3-AS1Q7Z2R9 100 aa7.37□□□□□ -1.23
SS18-202ENST00000269138 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.37□□□□□ -1.23
SS18-202ENST00000269138 CLEC2BQ92478 149 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms