RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 C11orf72Q8NBR9 251 aa3.98□□□□□ -1.77
VCAN-201ENST00000265077 Q6ZSN1 163 aa3.97□□□□□ -1.77
VCAN-201ENST00000265077 PRR3P79522 188 aaKnown RBP3.97□□□□□ -1.77
VCAN-201ENST00000265077 Q9BRP9 147 aa3.97□□□□□ -1.77
VCAN-201ENST00000265077 ZANQ9Y493 2812 aa3.97□□□□□ -1.77
VCAN-201ENST00000265077 DCHS2Q6V1P9 2916 aa3.97□□□□□ -1.77
VCAN-201ENST00000265077 A0A1B0GU69 56 aa3.97□□□□□ -1.77
VCAN-201ENST00000265077 INAFM1C9JVW0 142 aa3.97□□□□□ -1.77
VCAN-201ENST00000265077 TRBV7-4A0A0J9YYF1 115 aa3.96□□□□□ -1.77
VCAN-201ENST00000265077 IGHV3OR16-9A0A0B4J2B5 98 aa3.96□□□□□ -1.78
VCAN-201ENST00000265077 IGHV4-30-4P0DP06 118 aa3.96□□□□□ -1.78
VCAN-201ENST00000265077 C16orf95Q9H693 158 aa3.96□□□□□ -1.78
VCAN-201ENST00000265077 OBSCN-AS1Q96MR7 158 aa3.95□□□□□ -1.78
VCAN-201ENST00000265077 COA5Q86WW8 74 aa3.95□□□□□ -1.78
VCAN-201ENST00000265077 LINC00588Q9Y4M8 146 aa3.95□□□□□ -1.78
VCAN-201ENST00000265077 LAMA1P25391 3075 aa3.95□□□□□ -1.78
VCAN-201ENST00000265077 FSHBP01225 129 aa3.95□□□□□ -1.78
VCAN-201ENST00000265077 LINC00315P59091 139 aa3.95□□□□□ -1.78
VCAN-201ENST00000265077 NUPR2A6NF83 97 aa3.94□□□□□ -1.78
VCAN-201ENST00000265077 EIF4EBP3O60516 100 aaPredicted RBP3.94□□□□□ -1.78
VCAN-201ENST00000265077 WDFY4Q6ZS81 3184 aa3.94□□□□□ -1.78
VCAN-201ENST00000265077 IGHV6-1A0A0B4J1U7 121 aa3.94□□□□□ -1.78
VCAN-201ENST00000265077 AVPP01185 164 aa3.94□□□□□ -1.78
VCAN-201ENST00000265077 LY6G6DO95868 133 aa3.94□□□□□ -1.78
VCAN-201ENST00000265077 FAM229BQ4G0N7 80 aa3.94□□□□□ -1.78
VCAN-201ENST00000265077 Q75L30 129 aa3.93□□□□□ -1.78
VCAN-201ENST00000265077 SPINT4Q6UDR6 99 aa3.93□□□□□ -1.78
VCAN-201ENST00000265077 A0A087WSZ3 146 aa3.93□□□□□ -1.78
VCAN-201ENST00000265077 A8MTW9 85 aa3.93□□□□□ -1.78
VCAN-201ENST00000265077 HIVEP1P15822 2718 aa3.92□□□□□ -1.78
VCAN-201ENST00000265077 COL12A1Q99715 3063 aa3.92□□□□□ -1.78
VCAN-201ENST00000265077 CIRBP-AS1Q8TBR5 109 aa3.92□□□□□ -1.78
VCAN-201ENST00000265077 DEFB116Q30KQ4 102 aa3.92□□□□□ -1.78
VCAN-201ENST00000265077 SPANXA2-OT1Q8N9U9 137 aa3.92□□□□□ -1.78
VCAN-201ENST00000265077 Q6ZRP5 223 aa3.92□□□□□ -1.78
VCAN-201ENST00000265077 Q8NBF4 154 aa3.92□□□□□ -1.78
VCAN-201ENST00000265077 Q6ZTC4 211 aa3.91□□□□□ -1.78
VCAN-201ENST00000265077 HTTP42858 3142 aa3.91□□□□□ -1.78
VCAN-201ENST00000265077 ACYP2P14621 99 aa3.91□□□□□ -1.78
VCAN-201ENST00000265077 FREM2Q5SZK8 3169 aa3.91□□□□□ -1.78
VCAN-201ENST00000265077 KLK9Q2XQG4 91 aa3.91□□□□□ -1.78
VCAN-201ENST00000265077 IGLV5-52A0A0A0MRZ9 124 aa3.91□□□□□ -1.78
VCAN-201ENST00000265077 LINC01556Q5JQF7 62 aa3.91□□□□□ -1.78
VCAN-201ENST00000265077 RANBP2P49792 3224 aaKnown RBP3.9□□□□□ -1.78
VCAN-201ENST00000265077 PDZD2O15018 2839 aa3.9□□□□□ -1.78
VCAN-201ENST00000265077 KIAA0087Q14695 138 aa3.9□□□□□ -1.79
VCAN-201ENST00000265077 C6orf48Q9UBA6 75 aa3.9□□□□□ -1.79
VCAN-201ENST00000265077 UQCR11O14957 56 aa3.9□□□□□ -1.79
VCAN-201ENST00000265077 DMXL1Q9Y485 3027 aa3.89□□□□□ -1.79
VCAN-201ENST00000265077 PRLHP81277 87 aa3.89□□□□□ -1.79
VCAN-201ENST00000265077 FBN2P35556 2912 aa3.89□□□□□ -1.79
VCAN-201ENST00000265077 OCR1Q9BZK8 76 aa3.89□□□□□ -1.79
VCAN-201ENST00000265077 C22orf24Q9Y442 160 aa3.89□□□□□ -1.79
VCAN-201ENST00000265077 A0A1W2PPR1 153 aa3.88□□□□□ -1.79
VCAN-201ENST00000265077 C16orf90A8MZG2 172 aa3.88□□□□□ -1.79
VCAN-201ENST00000265077 M0R2N4 97 aa3.88□□□□□ -1.79
VCAN-201ENST00000265077 PHF5AQ7RTV0 110 aaKnown RBP3.88□□□□□ -1.79
VCAN-201ENST00000265077 MIR22HGQ0VDD5 57 aa3.88□□□□□ -1.79
VCAN-201ENST00000265077 C9orf129Q5T035 196 aaKnown RBP3.88□□□□□ -1.79
VCAN-201ENST00000265077 GVQW2A0A096LPI5 108 aaPredicted RBP3.88□□□□□ -1.79
VCAN-201ENST00000265077 Q6ZRX8 168 aa3.88□□□□□ -1.79
VCAN-201ENST00000265077 TNRC18O15417 2968 aaPredicted RBP3.87□□□□□ -1.79
VCAN-201ENST00000265077 Q5VV11 94 aa3.87□□□□□ -1.79
VCAN-201ENST00000265077 LINC00313P59037 77 aa3.87□□□□□ -1.79
VCAN-201ENST00000265077 H3BNG1 76 aa3.87□□□□□ -1.79
VCAN-201ENST00000265077 EPM2AB3EWF7 344 aa3.87□□□□□ -1.79
VCAN-201ENST00000265077 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
VCAN-201ENST00000265077 TENM3Q9P273 2699 aa3.87□□□□□ -1.79
VCAN-201ENST00000265077 IGLV6-57P01721 117 aa3.87□□□□□ -1.79
VCAN-201ENST00000265077 PLA2G2AP14555 144 aa3.86□□□□□ -1.79
VCAN-201ENST00000265077 LINC00167Q96N53 147 aa3.86□□□□□ -1.79
VCAN-201ENST00000265077 LY6G6CO95867 125 aa3.86□□□□□ -1.79
VCAN-201ENST00000265077 TENM1Q9UKZ4 2725 aa3.86□□□□□ -1.79
VCAN-201ENST00000265077 SSBP3-AS1Q7Z2R9 100 aa3.85□□□□□ -1.79
VCAN-201ENST00000265077 Q8N9P0 234 aaPredicted RBP3.85□□□□□ -1.79
VCAN-201ENST00000265077 C1orf134Q5TEV5 83 aa3.85□□□□□ -1.79
VCAN-201ENST00000265077 MOBPQ13875 183 aa3.85□□□□□ -1.79
VCAN-201ENST00000265077 K7EQZ3 153 aa3.84□□□□□ -1.79
VCAN-201ENST00000265077 BOD1L1Q8NFC6 3051 aa3.84□□□□□ -1.79
VCAN-201ENST00000265077 A8MWP4 228 aa3.84□□□□□ -1.8
VCAN-201ENST00000265077 LINC00476Q8WZB0 136 aa3.84□□□□□ -1.8
VCAN-201ENST00000265077 UTRNP46939 3433 aa3.84□□□□□ -1.8
VCAN-201ENST00000265077 ADGRG4Q8IZF6 3080 aa3.83□□□□□ -1.8
VCAN-201ENST00000265077 IGKV2D-30A0A075B6S6 120 aa3.83□□□□□ -1.8
VCAN-201ENST00000265077 IGKV2-30P06310 120 aa3.83□□□□□ -1.8
VCAN-201ENST00000265077 KRTAP10-9P60411 292 aa3.83□□□□□ -1.8
VCAN-201ENST00000265077 SPINK1P00995 79 aa3.82□□□□□ -1.8
VCAN-201ENST00000265077 X6R8D5 127 aa3.82□□□□□ -1.8
VCAN-201ENST00000265077 ST20-AS1Q8NBB2 130 aa3.82□□□□□ -1.8
VCAN-201ENST00000265077 IGLV8-61A0A075B6I0 122 aa3.82□□□□□ -1.8
VCAN-201ENST00000265077 DNAH10OSP0CZ25 163 aa3.81□□□□□ -1.8
VCAN-201ENST00000265077 MXRA5Q9NR99 2828 aa3.81□□□□□ -1.8
VCAN-201ENST00000265077 ASB16-AS1Q495Z4 193 aa3.81□□□□□ -1.8
VCAN-201ENST00000265077 ATMQ13315 3056 aa3.81□□□□□ -1.8
VCAN-201ENST00000265077 KCNQ1DNQ9H478 68 aa3.8□□□□□ -1.8
VCAN-201ENST00000265077 CSAG1Q6PB30 78 aa3.8□□□□□ -1.8
VCAN-201ENST00000265077 SMR3AQ99954 134 aa3.8□□□□□ -1.8
VCAN-201ENST00000265077 LINC00528Q8N1L1 170 aa3.79□□□□□ -1.8
VCAN-201ENST00000265077 PRR26Q8N8Z3 221 aa3.79□□□□□ -1.8
VCAN-201ENST00000265077 FAM229AH3BQW9 127 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 229 ms