RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 KPRPQ5T749 579 aaPredicted RBP10.95□□□□□ -0.66
GPC1-201ENST00000264039 IGLV6-57P01721 117 aa10.95□□□□□ -0.66
GPC1-201ENST00000264039 Q6ZRU5 148 aa10.95□□□□□ -0.66
GPC1-201ENST00000264039 FASNP49327 2511 aaKnown RBP10.95□□□□□ -0.66
GPC1-201ENST00000264039 A0A0G2JQZ4 141 aa10.94□□□□□ -0.66
GPC1-201ENST00000264039 A0A1W2PNN7 141 aa10.94□□□□□ -0.66
GPC1-201ENST00000264039 IGLV1-51P01701 117 aa10.93□□□□□ -0.66
GPC1-201ENST00000264039 NOTCH1P46531 2555 aa10.92□□□□□ -0.66
GPC1-201ENST00000264039 DEFB113Q30KQ7 82 aa10.92□□□□□ -0.66
GPC1-201ENST00000264039 ELOF1P60002 83 aaKnown RBP10.92□□□□□ -0.66
GPC1-201ENST00000264039 EPM2AB3EWF7 344 aa10.91□□□□□ -0.66
GPC1-201ENST00000264039 NDUFS5O43920 106 aa10.89□□□□□ -0.67
GPC1-201ENST00000264039 C9orf66Q5T8R8 295 aa10.89□□□□□ -0.67
GPC1-201ENST00000264039 TRAV22A0A0B4J277 110 aa10.89□□□□□ -0.67
GPC1-201ENST00000264039 H0Y9J4 135 aa10.89□□□□□ -0.67
GPC1-201ENST00000264039 APOC4P55056 127 aa10.89□□□□□ -0.67
GPC1-201ENST00000264039 LELP1Q5T871 98 aa10.89□□□□□ -0.67
GPC1-201ENST00000264039 SYCNQ0VAF6 134 aa10.88□□□□□ -0.67
GPC1-201ENST00000264039 ST20-AS1Q8NBB2 130 aa10.88□□□□□ -0.67
GPC1-201ENST00000264039 HIVEP1P15822 2718 aa10.88□□□□□ -0.67
GPC1-201ENST00000264039 IGKV2-24A0A0C4DH68 120 aa10.88□□□□□ -0.67
GPC1-201ENST00000264039 LYRM9A8MSI8 78 aa10.88□□□□□ -0.67
GPC1-201ENST00000264039 OCR1Q9BZK8 76 aa10.88□□□□□ -0.67
GPC1-201ENST00000264039 HECTD1Q9ULT8 2610 aa10.87□□□□□ -0.67
GPC1-201ENST00000264039 K7EQZ3 153 aa10.87□□□□□ -0.67
GPC1-201ENST00000264039 CSNK1G2-AS1Q8NCQ2 148 aa10.86□□□□□ -0.67
GPC1-201ENST00000264039 COL6A5A8TX70 2615 aa10.85□□□□□ -0.67
GPC1-201ENST00000264039 HELZ2Q9BYK8 2649 aaKnown RBP10.85□□□□□ -0.67
GPC1-201ENST00000264039 A0A087WSZ3 146 aa10.84□□□□□ -0.67
GPC1-201ENST00000264039 IGHV4-30-4P0DP06 118 aa10.84□□□□□ -0.67
GPC1-201ENST00000264039 PCOTHQ58A44 107 aa10.84□□□□□ -0.67
GPC1-201ENST00000264039 EGFEM1PQ0D2K5 195 aa10.83□□□□□ -0.68
GPC1-201ENST00000264039 IGSF10Q6WRI0 2623 aa10.83□□□□□ -0.68
GPC1-201ENST00000264039 hDV103S1A0JD37 113 aa10.83□□□□□ -0.68
GPC1-201ENST00000264039 FSHBP01225 129 aa10.83□□□□□ -0.68
GPC1-201ENST00000264039 VPREB1P12018 145 aa10.82□□□□□ -0.68
GPC1-201ENST00000264039 X6R8D5 127 aa10.82□□□□□ -0.68
GPC1-201ENST00000264039 HCG22E2RYF7 251 aa10.82□□□□□ -0.68
GPC1-201ENST00000264039 RPL37AP61513 92 aaKnown RBP10.82□□□□□ -0.68
GPC1-201ENST00000264039 NBEAL1Q6ZS30 2694 aa10.81□□□□□ -0.68
GPC1-201ENST00000264039 Q6ZRP5 223 aa10.81□□□□□ -0.68
GPC1-201ENST00000264039 Q6ZTC4 211 aa10.81□□□□□ -0.68
GPC1-201ENST00000264039 B9D2Q9BPU9 175 aa10.81□□□□□ -0.68
GPC1-201ENST00000264039 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.81□□□□□ -0.68
GPC1-201ENST00000264039 PSCAO43653 123 aa10.81□□□□□ -0.68
GPC1-201ENST00000264039 NDUFB1O75438 58 aa10.81□□□□□ -0.68
GPC1-201ENST00000264039 ERC2-IT1O76042 136 aa10.8□□□□□ -0.68
GPC1-201ENST00000264039 C7orf33Q8WU49 177 aa10.8□□□□□ -0.68
GPC1-201ENST00000264039 LINC00528Q8N1L1 170 aa10.8□□□□□ -0.68
GPC1-201ENST00000264039 BSNQ9UPA5 3926 aa10.8□□□□□ -0.68
GPC1-201ENST00000264039 UBE2AP49459 152 aa10.79□□□□□ -0.68
GPC1-201ENST00000264039 VPS13CQ709C8 3753 aa10.78□□□□□ -0.68
GPC1-201ENST00000264039 Q8N377 158 aa10.78□□□□□ -0.68
GPC1-201ENST00000264039 H0Y9P7 68 aa10.77□□□□□ -0.69
GPC1-201ENST00000264039 C19orf73Q9NVV2 129 aa10.77□□□□□ -0.69
GPC1-201ENST00000264039 DHRS4-AS1Q9P1J3 65 aa10.76□□□□□ -0.69
GPC1-201ENST00000264039 A8MU10 97 aa10.75□□□□□ -0.69
GPC1-201ENST00000264039 LINC00612Q8N6U2 182 aa10.75□□□□□ -0.69
GPC1-201ENST00000264039 MGAM2Q2M2H8 2515 aa10.75□□□□□ -0.69
GPC1-201ENST00000264039 A0A1W2PNM2 257 aa10.74□□□□□ -0.69
GPC1-201ENST00000264039 FAM168BA1KXE4 195 aa10.74□□□□□ -0.69
GPC1-201ENST00000264039 SERTAD4-AS1Q5TG53 156 aa10.73□□□□□ -0.69
GPC1-201ENST00000264039 Q8NBF4 154 aa10.73□□□□□ -0.69
GPC1-201ENST00000264039 PRLHP81277 87 aa10.73□□□□□ -0.69
GPC1-201ENST00000264039 SPAG11AQ6PDA7 123 aa10.72□□□□□ -0.69
GPC1-201ENST00000264039 CASC2Q6XLA1 102 aa10.71□□□□□ -0.69
GPC1-201ENST00000264039 SMR3AQ99954 134 aa10.71□□□□□ -0.69
GPC1-201ENST00000264039 PRR15Q8IV56 129 aa10.71□□□□□ -0.7
GPC1-201ENST00000264039 MAST4O15021 2626 aa10.68□□□□□ -0.7
GPC1-201ENST00000264039 CDK2AP2O75956 126 aa10.67□□□□□ -0.7
GPC1-201ENST00000264039 LINC00476Q8WZB0 136 aa10.67□□□□□ -0.7
GPC1-201ENST00000264039 FLNBO75369 2602 aaKnown RBP10.66□□□□□ -0.7
GPC1-201ENST00000264039 CD164Q04900 197 aa10.65□□□□□ -0.71
GPC1-201ENST00000264039 Q6ZRX8 168 aa10.65□□□□□ -0.71
GPC1-201ENST00000264039 ITPR2Q14571 2701 aa10.64□□□□□ -0.71
GPC1-201ENST00000264039 Q1T7F1 81 aa10.64□□□□□ -0.71
GPC1-201ENST00000264039 PDZD2O15018 2839 aa10.64□□□□□ -0.71
GPC1-201ENST00000264039 LIMD2Q9BT23 127 aa10.63□□□□□ -0.71
GPC1-201ENST00000264039 DSCR10P59022 87 aa10.63□□□□□ -0.71
GPC1-201ENST00000264039 DEFB131BA0A096LNP1 70 aa10.63□□□□□ -0.71
GPC1-201ENST00000264039 GVQW2A0A096LPI5 108 aaPredicted RBP10.62□□□□□ -0.71
GPC1-201ENST00000264039 PRR34Q9NV39 138 aa10.6□□□□□ -0.71
GPC1-201ENST00000264039 C15orf56Q8N910 161 aa10.58□□□□□ -0.72
GPC1-201ENST00000264039 Q9BRP9 147 aa10.58□□□□□ -0.72
GPC1-201ENST00000264039 REG3GQ6UW15 175 aa10.58□□□□□ -0.72
GPC1-201ENST00000264039 OXLD1Q5BKU9 147 aa10.57□□□□□ -0.72
GPC1-201ENST00000264039 RBM12B-AS1Q9P1G2 102 aa10.56□□□□□ -0.72
GPC1-201ENST00000264039 KCNQ1DNQ9H478 68 aa10.55□□□□□ -0.72
GPC1-201ENST00000264039 COA5Q86WW8 74 aa10.55□□□□□ -0.72
GPC1-201ENST00000264039 Q8NAQ8 132 aa10.55□□□□□ -0.72
GPC1-201ENST00000264039 IGLV9-49A0A0B4J1Y8 123 aa10.55□□□□□ -0.72
GPC1-201ENST00000264039 KTN1-AS1Q86SY8 53 aa10.55□□□□□ -0.72
GPC1-201ENST00000264039 VWFP04275 2813 aa10.54□□□□□ -0.72
GPC1-201ENST00000264039 Q5VV11 94 aa10.54□□□□□ -0.72
GPC1-201ENST00000264039 C11orf45Q8TAV5 145 aa10.54□□□□□ -0.72
GPC1-201ENST00000264039 IGLV5-48A0A075B6I7 105 aa10.54□□□□□ -0.72
GPC1-201ENST00000264039 C16orf90A8MZG2 172 aa10.54□□□□□ -0.72
GPC1-201ENST00000264039 SPINK6Q6UWN8 80 aa10.53□□□□□ -0.72
GPC1-201ENST00000264039 IGFL1Q6UW32 110 aa10.53□□□□□ -0.72
GPC1-201ENST00000264039 NSD1Q96L73 2696 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms