RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 C2orf48Q96LS8 159 aa10.74□□□□□ -0.69
SDCBP-201ENST00000260130 SCXQ7RTU7 201 aa10.73□□□□□ -0.69
SDCBP-201ENST00000260130 FAT1Q14517 4588 aa10.73□□□□□ -0.69
SDCBP-201ENST00000260130 SMR3BP02814 79 aaPredicted RBP10.73□□□□□ -0.69
SDCBP-201ENST00000260130 LINC01561Q8N1V8 128 aa10.73□□□□□ -0.69
SDCBP-201ENST00000260130 SMIM11BQ8TCY0 68 aa10.73□□□□□ -0.69
SDCBP-201ENST00000260130 CAMK2N2Q96S95 79 aa10.73□□□□□ -0.69
SDCBP-201ENST00000260130 C22orf24Q9Y442 160 aa10.73□□□□□ -0.69
SDCBP-201ENST00000260130 CCDC179H3BU77 68 aa10.72□□□□□ -0.69
SDCBP-201ENST00000260130 CIRBP-AS1Q8TBR5 109 aa10.72□□□□□ -0.69
SDCBP-201ENST00000260130 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.72□□□□□ -0.69
SDCBP-201ENST00000260130 Q6ZRU5 148 aa10.72□□□□□ -0.69
SDCBP-201ENST00000260130 PANO1I0J062 215 aa10.7□□□□□ -0.7
SDCBP-201ENST00000260130 PFN2P35080 140 aa10.7□□□□□ -0.7
SDCBP-201ENST00000260130 C6orf226Q5I0X4 101 aa10.7□□□□□ -0.7
SDCBP-201ENST00000260130 SS18L2Q9UHA2 77 aa10.7□□□□□ -0.7
SDCBP-201ENST00000260130 F8WDY8 70 aa10.7□□□□□ -0.7
SDCBP-201ENST00000260130 KRTAP4-5Q9BYR2 181 aa10.7□□□□□ -0.7
SDCBP-201ENST00000260130 SMCR5Q8TEV8 140 aa10.69□□□□□ -0.7
SDCBP-201ENST00000260130 KIAA0087Q14695 138 aa10.69□□□□□ -0.7
SDCBP-201ENST00000260130 DPH3Q96FX2 82 aa10.69□□□□□ -0.7
SDCBP-201ENST00000260130 PKIGQ9Y2B9 76 aa10.69□□□□□ -0.7
SDCBP-201ENST00000260130 A0A087WYN8 130 aa10.68□□□□□ -0.7
SDCBP-201ENST00000260130 CHTF8P0CG12 524 aa10.68□□□□□ -0.7
SDCBP-201ENST00000260130 GAGE2AQ6NT46 116 aa10.68□□□□□ -0.7
SDCBP-201ENST00000260130 Q8IZM0 81 aa10.68□□□□□ -0.7
SDCBP-201ENST00000260130 EPM2AB3EWF7 344 aa10.67□□□□□ -0.7
SDCBP-201ENST00000260130 OR13C6PQ8NH95 151 aa10.67□□□□□ -0.7
SDCBP-201ENST00000260130 FAM229AH3BQW9 127 aa10.66□□□□□ -0.7
SDCBP-201ENST00000260130 CXCL5P42830 114 aa10.66□□□□□ -0.7
SDCBP-201ENST00000260130 SPACA4Q8TDM5 124 aa10.66□□□□□ -0.7
SDCBP-201ENST00000260130 IGKV2-24A0A0C4DH68 120 aa10.66□□□□□ -0.7
SDCBP-201ENST00000260130 FAM236AA0A1B0GUQ0 79 aa10.66□□□□□ -0.7
SDCBP-201ENST00000260130 FAM236BA0A1B0GV22 79 aa10.66□□□□□ -0.7
SDCBP-201ENST00000260130 ABCA13Q86UQ4 5058 aa10.65□□□□□ -0.7
SDCBP-201ENST00000260130 A0A096LNI7 61 aa10.65□□□□□ -0.7
SDCBP-201ENST00000260130 LOC107984640A0A0U1RRK4 108 aa10.65□□□□□ -0.7
SDCBP-201ENST00000260130 C10orf25Q5T742 122 aa10.65□□□□□ -0.7
SDCBP-201ENST00000260130 Q5VSD8 79 aa10.65□□□□□ -0.7
SDCBP-201ENST00000260130 UNQ6190/PRO20217Q6UXQ8 127 aa10.65□□□□□ -0.7
SDCBP-201ENST00000260130 LINC00474Q9P2X8 69 aa10.64□□□□□ -0.71
SDCBP-201ENST00000260130 LINC00528Q8N1L1 170 aa10.63□□□□□ -0.71
SDCBP-201ENST00000260130 OBSCN-AS1Q96MR7 158 aa10.63□□□□□ -0.71
SDCBP-201ENST00000260130 PCLOQ9Y6V0 5065 aa10.62□□□□□ -0.71
SDCBP-201ENST00000260130 C6orf48Q9UBA6 75 aa10.62□□□□□ -0.71
SDCBP-201ENST00000260130 VPS13BQ7Z7G8 4022 aa10.61□□□□□ -0.71
SDCBP-201ENST00000260130 PLAC8Q9NZF1 115 aa10.61□□□□□ -0.71
SDCBP-201ENST00000260130 COX17Q14061 63 aa10.6□□□□□ -0.71
SDCBP-201ENST00000260130 ORMDL1Q9P0S3 153 aa10.6□□□□□ -0.71
SDCBP-201ENST00000260130 C14orf132Q9NPU4 83 aa10.6□□□□□ -0.71
SDCBP-201ENST00000260130 A0A1B0GX51 115 aa10.59□□□□□ -0.71
SDCBP-201ENST00000260130 RPL18AQ02543 176 aaKnown RBP10.59□□□□□ -0.71
SDCBP-201ENST00000260130 NDUFC2O95298 119 aa10.59□□□□□ -0.71
SDCBP-201ENST00000260130 TLX1NBP0CAT3 122 aa10.59□□□□□ -0.71
SDCBP-201ENST00000260130 SRRM2Q9UQ35 2752 aaKnown RBP10.58□□□□□ -0.72
SDCBP-201ENST00000260130 PLA2G1BP04054 148 aaKnown RBP10.58□□□□□ -0.72
SDCBP-201ENST00000260130 C9orf129Q5T035 196 aaKnown RBP10.57□□□□□ -0.72
SDCBP-201ENST00000260130 Q6ZRP5 223 aa10.56□□□□□ -0.72
SDCBP-201ENST00000260130 C9orf116Q5BN46 136 aaPredicted RBP10.56□□□□□ -0.72
SDCBP-201ENST00000260130 LINC00167Q96N53 147 aa10.56□□□□□ -0.72
SDCBP-201ENST00000260130 TMEM126AQ9H061 195 aa10.56□□□□□ -0.72
SDCBP-201ENST00000260130 NCR3O14931 201 aa10.55□□□□□ -0.72
SDCBP-201ENST00000260130 Q6JHZ5 121 aa10.55□□□□□ -0.72
SDCBP-201ENST00000260130 NDUFC2-KCTD14E9PQ53 114 aa10.54□□□□□ -0.72
SDCBP-201ENST00000260130 UQCRQO14949 82 aa10.54□□□□□ -0.72
SDCBP-201ENST00000260130 C3orf22Q8N5N4 141 aa10.54□□□□□ -0.72
SDCBP-201ENST00000260130 JMJD7-PLA2G4BH0Y9G9 81 aa10.53□□□□□ -0.72
SDCBP-201ENST00000260130 LINC00846Q9NV44 126 aa10.52□□□□□ -0.72
SDCBP-201ENST00000260130 A0A1W2PNN7 141 aa10.52□□□□□ -0.73
SDCBP-201ENST00000260130 TMEM256-PLSCR3K7ERE1 68 aa10.52□□□□□ -0.73
SDCBP-201ENST00000260130 RPL37AP61513 92 aaKnown RBP10.52□□□□□ -0.73
SDCBP-201ENST00000260130 HIST1H4AP62805 103 aaKnown RBP10.52□□□□□ -0.73
SDCBP-201ENST00000260130 ATOX1O00244 68 aa10.51□□□□□ -0.73
SDCBP-201ENST00000260130 KRTAP10-4P60372 401 aaPredicted RBP10.51□□□□□ -0.73
SDCBP-201ENST00000260130 C9orf153Q5TBE3 101 aa10.51□□□□□ -0.73
SDCBP-201ENST00000260130 C7orf33Q8WU49 177 aa10.51□□□□□ -0.73
SDCBP-201ENST00000260130 CCKP06307 115 aa10.5□□□□□ -0.73
SDCBP-201ENST00000260130 PRR3P79522 188 aaKnown RBP10.5□□□□□ -0.73
SDCBP-201ENST00000260130 S100A7L2Q5SY68 101 aa10.49□□□□□ -0.73
SDCBP-201ENST00000260130 COX7CP15954 63 aa10.48□□□□□ -0.73
SDCBP-201ENST00000260130 SVIPQ8NHG7 77 aa10.48□□□□□ -0.73
SDCBP-201ENST00000260130 IGKV3D-7A0A0C4DH55 119 aa10.48□□□□□ -0.73
SDCBP-201ENST00000260130 FAM168BA1KXE4 195 aa10.46□□□□□ -0.73
SDCBP-201ENST00000260130 C6orf99Q4VX62 202 aa10.45□□□□□ -0.74
SDCBP-201ENST00000260130 SMIM20Q8N5G0 67 aa10.45□□□□□ -0.74
SDCBP-201ENST00000260130 XAGE1AQ9HD64 81 aa10.45□□□□□ -0.74
SDCBP-201ENST00000260130 FAM19A5Q7Z5A7 132 aaPredicted RBP10.44□□□□□ -0.74
SDCBP-201ENST00000260130 PHF5AQ7RTV0 110 aaKnown RBP10.43□□□□□ -0.74
SDCBP-201ENST00000260130 ATP5EP2Q5VTU8 51 aa10.43□□□□□ -0.74
SDCBP-201ENST00000260130 LINC00575Q6W349 94 aa10.43□□□□□ -0.74
SDCBP-201ENST00000260130 KRTAP7-1Q8IUC3 87 aa10.43□□□□□ -0.74
SDCBP-201ENST00000260130 MYCBP2O75592 4640 aa10.42□□□□□ -0.74
SDCBP-201ENST00000260130 CRYGAP11844 174 aa10.41□□□□□ -0.74
SDCBP-201ENST00000260130 Q8NDZ9 215 aa10.41□□□□□ -0.74
SDCBP-201ENST00000260130 hADV29S1A0JD25 119 aa10.4□□□□□ -0.74
SDCBP-201ENST00000260130 SERTAD4-AS1Q5TG53 156 aa10.39□□□□□ -0.75
SDCBP-201ENST00000260130 H3BQ85 93 aa10.38□□□□□ -0.75
SDCBP-201ENST00000260130 IGLV6-57P01721 117 aa10.38□□□□□ -0.75
SDCBP-201ENST00000260130 SERP2Q8N6R1 65 aa10.38□□□□□ -0.75
SDCBP-201ENST00000260130 A0A087WVE0 104 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms