RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 FAM236CP0DP71 79 aa8.23□□□□□ -1.09
TM9SF4-201ENST00000217315 F8WDY8 70 aa8.22□□□□□ -1.09
TM9SF4-201ENST00000217315 PKIGQ9Y2B9 76 aa8.22□□□□□ -1.09
TM9SF4-201ENST00000217315 REG3GQ6UW15 175 aa8.21□□□□□ -1.09
TM9SF4-201ENST00000217315 C15orf56Q8N910 161 aa8.21□□□□□ -1.09
TM9SF4-201ENST00000217315 LINC00167Q96N53 147 aa8.21□□□□□ -1.09
TM9SF4-201ENST00000217315 TRAV7A0A075B6U4 112 aa8.21□□□□□ -1.1
TM9SF4-201ENST00000217315 B9D2Q9BPU9 175 aa8.21□□□□□ -1.1
TM9SF4-201ENST00000217315 PRLHP81277 87 aa8.2□□□□□ -1.1
TM9SF4-201ENST00000217315 H0Y9J4 135 aa8.19□□□□□ -1.1
TM9SF4-201ENST00000217315 PRYO14603 147 aa8.19□□□□□ -1.1
TM9SF4-201ENST00000217315 DNAH10OSP0CZ25 163 aa8.19□□□□□ -1.1
TM9SF4-201ENST00000217315 LOC110117498A0A087WWA1 95 aa8.18□□□□□ -1.1
TM9SF4-201ENST00000217315 SERTAD4-AS1Q5TG53 156 aa8.18□□□□□ -1.1
TM9SF4-201ENST00000217315 FAM168BA1KXE4 195 aa8.18□□□□□ -1.1
TM9SF4-201ENST00000217315 TRBV7-6A0A0J9YX20 115 aa8.17□□□□□ -1.1
TM9SF4-201ENST00000217315 WFDC13Q8IUB5 93 aa8.17□□□□□ -1.1
TM9SF4-201ENST00000217315 Q8NDZ9 215 aa8.17□□□□□ -1.1
TM9SF4-201ENST00000217315 NDUFS5O43920 106 aa8.17□□□□□ -1.1
TM9SF4-201ENST00000217315 NDUFB1O75438 58 aa8.17□□□□□ -1.1
TM9SF4-201ENST00000217315 MP68P56378 58 aa8.17□□□□□ -1.1
TM9SF4-201ENST00000217315 CRYGAP11844 174 aa8.16□□□□□ -1.1
TM9SF4-201ENST00000217315 CXCL6P80162 114 aa8.16□□□□□ -1.1
TM9SF4-201ENST00000217315 FAM30AQ9NZY2 134 aa8.15□□□□□ -1.1
TM9SF4-201ENST00000217315 CSMD2Q7Z408 3487 aa8.15□□□□□ -1.1
TM9SF4-201ENST00000217315 LINC00528Q8N1L1 170 aa8.15□□□□□ -1.1
TM9SF4-201ENST00000217315 ST20-AS1Q8NBB2 130 aa8.15□□□□□ -1.1
TM9SF4-201ENST00000217315 DEFB116Q30KQ4 102 aa8.15□□□□□ -1.11
TM9SF4-201ENST00000217315 Q6ZRX8 168 aa8.14□□□□□ -1.11
TM9SF4-201ENST00000217315 A0A087WSZ3 146 aa8.13□□□□□ -1.11
TM9SF4-201ENST00000217315 OBSCN-AS1Q96MR7 158 aa8.12□□□□□ -1.11
TM9SF4-201ENST00000217315 BAHCC1Q9P281 2608 aa8.12□□□□□ -1.11
TM9SF4-201ENST00000217315 K7EIL1 84 aa8.12□□□□□ -1.11
TM9SF4-201ENST00000217315 CASC10Q5T4H9 136 aa8.12□□□□□ -1.11
TM9SF4-201ENST00000217315 IGLV9-49A0A0B4J1Y8 123 aa8.1□□□□□ -1.11
TM9SF4-201ENST00000217315 NDUFC1O43677 76 aa8.1□□□□□ -1.11
TM9SF4-201ENST00000217315 Q9BRP9 147 aa8.1□□□□□ -1.11
TM9SF4-201ENST00000217315 PRR4Q16378 134 aa8.1□□□□□ -1.11
TM9SF4-201ENST00000217315 KCNQ1DNQ9H478 68 aa8.1□□□□□ -1.11
TM9SF4-201ENST00000217315 WIPF1O43516 503 aa8.1□□□□□ -1.11
TM9SF4-201ENST00000217315 HRCT1Q6UXD1 115 aa8.1□□□□□ -1.11
TM9SF4-201ENST00000217315 CHTF8P0CG12 524 aa8.08□□□□□ -1.12
TM9SF4-201ENST00000217315 TMEM254Q8TBM7 123 aa8.08□□□□□ -1.12
TM9SF4-201ENST00000217315 TENM4Q6N022 2769 aa8.08□□□□□ -1.12
TM9SF4-201ENST00000217315 NUPR2A6NF83 97 aa8.08□□□□□ -1.12
TM9SF4-201ENST00000217315 MPLKIPQ8TAP9 179 aa8.08□□□□□ -1.12
TM9SF4-201ENST00000217315 LINC00474Q9P2X8 69 aa8.07□□□□□ -1.12
TM9SF4-201ENST00000217315 TRBV7-4A0A0J9YYF1 115 aa8.07□□□□□ -1.12
TM9SF4-201ENST00000217315 TM2D3Q9BRN9 247 aa8.07□□□□□ -1.12
TM9SF4-201ENST00000217315 IGLV1-50A0A075B6I6 118 aa8.06□□□□□ -1.12
TM9SF4-201ENST00000217315 Q8N377 158 aa8.06□□□□□ -1.12
TM9SF4-201ENST00000217315 Q8NBF4 154 aa8.06□□□□□ -1.12
TM9SF4-201ENST00000217315 PHF5AQ7RTV0 110 aaKnown RBP8.05□□□□□ -1.12
TM9SF4-201ENST00000217315 MDFIQ99750 246 aa8.05□□□□□ -1.12
TM9SF4-201ENST00000217315 LINC00476Q8WZB0 136 aa8.04□□□□□ -1.12
TM9SF4-201ENST00000217315 LY6G6CO95867 125 aa8.04□□□□□ -1.12
TM9SF4-201ENST00000217315 SMIM29Q86T20 159 aa8.04□□□□□ -1.12
TM9SF4-201ENST00000217315 VWFP04275 2813 aa8.03□□□□□ -1.12
TM9SF4-201ENST00000217315 TENM1Q9UKZ4 2725 aa8.03□□□□□ -1.12
TM9SF4-201ENST00000217315 C16orf90A8MZG2 172 aa8.03□□□□□ -1.12
TM9SF4-201ENST00000217315 LRCOL1A6NCL2 159 aa8.02□□□□□ -1.13
TM9SF4-201ENST00000217315 SPINK6Q6UWN8 80 aa8.02□□□□□ -1.13
TM9SF4-201ENST00000217315 KMT2BQ9UMN6 2715 aaPredicted RBP8.02□□□□□ -1.13
TM9SF4-201ENST00000217315 STAB2Q8WWQ8 2551 aa8.02□□□□□ -1.13
TM9SF4-201ENST00000217315 A0A0G2JQZ4 141 aa8.01□□□□□ -1.13
TM9SF4-201ENST00000217315 A0A1W2PNN7 141 aa8.01□□□□□ -1.13
TM9SF4-201ENST00000217315 BCE1O60756 84 aa8□□□□□ -1.13
TM9SF4-201ENST00000217315 SERP1Q9Y6X1 66 aa8□□□□□ -1.13
TM9SF4-201ENST00000217315 ERC2-IT1O76042 136 aa8□□□□□ -1.13
TM9SF4-201ENST00000217315 TLX1NBP0CAT3 122 aa8□□□□□ -1.13
TM9SF4-201ENST00000217315 LINC00208Q96KT6 92 aa8□□□□□ -1.13
TM9SF4-201ENST00000217315 ATP5EP56381 51 aaPredicted RBP7.99□□□□□ -1.13
TM9SF4-201ENST00000217315 EPM2AB3EWF7 344 aa7.99□□□□□ -1.13
TM9SF4-201ENST00000217315 HCG22E2RYF7 251 aa7.98□□□□□ -1.13
TM9SF4-201ENST00000217315 OTOGQ6ZRI0 2925 aa7.98□□□□□ -1.13
TM9SF4-201ENST00000217315 NBDYA0A0U1RRE5 68 aa7.98□□□□□ -1.13
TM9SF4-201ENST00000217315 IGKV4-1P06312 121 aa7.98□□□□□ -1.13
TM9SF4-201ENST00000217315 PDZD2O15018 2839 aa7.98□□□□□ -1.13
TM9SF4-201ENST00000217315 NBPF19A0A087WUL8 3843 aa7.97□□□□□ -1.13
TM9SF4-201ENST00000217315 SMIM26A0A096LP01 95 aa7.97□□□□□ -1.13
TM9SF4-201ENST00000217315 CASC2Q6XLA1 102 aa7.97□□□□□ -1.13
TM9SF4-201ENST00000217315 BRK1Q8WUW1 75 aa7.97□□□□□ -1.13
TM9SF4-201ENST00000217315 KRTAP26-1Q6PEX3 210 aa7.96□□□□□ -1.13
TM9SF4-201ENST00000217315 C5orf47Q569G3 176 aa7.96□□□□□ -1.14
TM9SF4-201ENST00000217315 ZNF706Q9Y5V0 76 aaPredicted RBP7.96□□□□□ -1.14
TM9SF4-201ENST00000217315 A0A1B0GW54 56 aa7.95□□□□□ -1.14
TM9SF4-201ENST00000217315 PLA2G2DQ9UNK4 145 aa7.95□□□□□ -1.14
TM9SF4-201ENST00000217315 RPS28P62857 69 aaKnown RBP7.95□□□□□ -1.14
TM9SF4-201ENST00000217315 IGLV5-52A0A0A0MRZ9 124 aa7.94□□□□□ -1.14
TM9SF4-201ENST00000217315 A0A1W2PNM2 257 aa7.94□□□□□ -1.14
TM9SF4-201ENST00000217315 K7EQZ3 153 aa7.94□□□□□ -1.14
TM9SF4-201ENST00000217315 RPL37AP61513 92 aaKnown RBP7.93□□□□□ -1.14
TM9SF4-201ENST00000217315 TENM3Q9P273 2699 aa7.92□□□□□ -1.14
TM9SF4-201ENST00000217315 VPS13CQ709C8 3753 aa7.92□□□□□ -1.14
TM9SF4-201ENST00000217315 IGFL1Q6UW32 110 aa7.92□□□□□ -1.14
TM9SF4-201ENST00000217315 C1orf134Q5TEV5 83 aa7.91□□□□□ -1.14
TM9SF4-201ENST00000217315 IGLV5-48A0A075B6I7 105 aa7.9□□□□□ -1.14
TM9SF4-201ENST00000217315 IGHV6-1A0A0B4J1U7 121 aa7.9□□□□□ -1.14
TM9SF4-201ENST00000217315 CIRBP-AS1Q8TBR5 109 aa7.9□□□□□ -1.14
TM9SF4-201ENST00000217315 CYSTM1Q9H1C7 97 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms