RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CARD19Q96LW7 228 aa11.46□□□□□ -0.58
PHGDH-232ENST00000641947 PRR3P79522 188 aaKnown RBP11.45□□□□□ -0.58
PHGDH-232ENST00000641947 XAGE1AQ9HD64 81 aa11.44□□□□□ -0.58
PHGDH-232ENST00000641947 LRCOL1A6NCL2 159 aa11.44□□□□□ -0.58
PHGDH-232ENST00000641947 FABP2P12104 132 aa11.44□□□□□ -0.58
PHGDH-232ENST00000641947 Q6ZRP5 223 aa11.44□□□□□ -0.58
PHGDH-232ENST00000641947 LINC00476Q8WZB0 136 aa11.44□□□□□ -0.58
PHGDH-232ENST00000641947 SACSQ9NZJ4 4579 aa11.43□□□□□ -0.58
PHGDH-232ENST00000641947 NDUFC2-KCTD14E9PQ53 114 aa11.43□□□□□ -0.58
PHGDH-232ENST00000641947 LY6G6CO95867 125 aa11.43□□□□□ -0.58
PHGDH-232ENST00000641947 Q1RN00 199 aa11.41□□□□□ -0.58
PHGDH-232ENST00000641947 SPCS1Q9Y6A9 102 aa11.41□□□□□ -0.58
PHGDH-232ENST00000641947 C3orf84H3BNL1 204 aa11.41□□□□□ -0.58
PHGDH-232ENST00000641947 K7EP34 96 aa11.41□□□□□ -0.58
PHGDH-232ENST00000641947 TRIAP1O43715 76 aa11.41□□□□□ -0.58
PHGDH-232ENST00000641947 NDUFC2O95298 119 aa11.4□□□□□ -0.58
PHGDH-232ENST00000641947 RNF151Q2KHN1 245 aa11.4□□□□□ -0.58
PHGDH-232ENST00000641947 UBE2V1Q13404 147 aa11.39□□□□□ -0.59
PHGDH-232ENST00000641947 GAGE2EQ4V326 116 aa11.39□□□□□ -0.59
PHGDH-232ENST00000641947 GAGE2DQ9UEU5 116 aa11.39□□□□□ -0.59
PHGDH-232ENST00000641947 NCR3O14931 201 aa11.39□□□□□ -0.59
PHGDH-232ENST00000641947 TRAV13-2A0A0B4J235 113 aa11.38□□□□□ -0.59
PHGDH-232ENST00000641947 GAGE10A6NGK3 116 aa11.38□□□□□ -0.59
PHGDH-232ENST00000641947 TLX1NBP0CAT3 122 aa11.38□□□□□ -0.59
PHGDH-232ENST00000641947 C9orf129Q5T035 196 aaKnown RBP11.38□□□□□ -0.59
PHGDH-232ENST00000641947 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.37□□□□□ -0.59
PHGDH-232ENST00000641947 PSMB2P49721 201 aa11.37□□□□□ -0.59
PHGDH-232ENST00000641947 DNAH11Q96DT5 4516 aa11.36□□□□□ -0.59
PHGDH-232ENST00000641947 CNBPP62633 177 aaKnown RBP11.36□□□□□ -0.59
PHGDH-232ENST00000641947 RPL18AQ02543 176 aaKnown RBP11.36□□□□□ -0.59
PHGDH-232ENST00000641947 TCL1BO95988 128 aa11.35□□□□□ -0.59
PHGDH-232ENST00000641947 VPREB1P12018 145 aa11.34□□□□□ -0.59
PHGDH-232ENST00000641947 GTF2H5Q6ZYL4 71 aa11.33□□□□□ -0.59
PHGDH-232ENST00000641947 OR13C6PQ8NH95 151 aa11.33□□□□□ -0.59
PHGDH-232ENST00000641947 C14orf177Q52M58 125 aa11.33□□□□□ -0.6
PHGDH-232ENST00000641947 SMIM11BQ8TCY0 68 aa11.33□□□□□ -0.6
PHGDH-232ENST00000641947 FAT2Q9NYQ8 4349 aa11.32□□□□□ -0.6
PHGDH-232ENST00000641947 H3BMG7 143 aa11.32□□□□□ -0.6
PHGDH-232ENST00000641947 SCGB1C2P0DMR2 95 aa11.32□□□□□ -0.6
PHGDH-232ENST00000641947 RPL28P46779 137 aaKnown RBP11.31□□□□□ -0.6
PHGDH-232ENST00000641947 A0A087WTM6 91 aa11.31□□□□□ -0.6
PHGDH-232ENST00000641947 SERTAD4-AS1Q5TG53 156 aa11.31□□□□□ -0.6
PHGDH-232ENST00000641947 Q8N814 137 aa11.31□□□□□ -0.6
PHGDH-232ENST00000641947 CLEC2BQ92478 149 aa11.31□□□□□ -0.6
PHGDH-232ENST00000641947 DNAH5Q8TE73 4624 aa11.3□□□□□ -0.6
PHGDH-232ENST00000641947 LOC107984640A0A0U1RRK4 108 aa11.3□□□□□ -0.6
PHGDH-232ENST00000641947 FAM168BA1KXE4 195 aa11.3□□□□□ -0.6
PHGDH-232ENST00000641947 GAGE2BQ13066 116 aa11.3□□□□□ -0.6
PHGDH-232ENST00000641947 C1orf134Q5TEV5 83 aa11.29□□□□□ -0.6
PHGDH-232ENST00000641947 LYRM7Q5U5X0 104 aa11.29□□□□□ -0.6
PHGDH-232ENST00000641947 KRTAP7-1Q8IUC3 87 aa11.29□□□□□ -0.6
PHGDH-232ENST00000641947 TRBV10-2A0A0K0K1G8 114 aa11.28□□□□□ -0.6
PHGDH-232ENST00000641947 MTURNQ8N3F0 131 aa11.28□□□□□ -0.6
PHGDH-232ENST00000641947 IGLV6-57P01721 117 aa11.28□□□□□ -0.6
PHGDH-232ENST00000641947 LINC01620Q4KN68 170 aa11.28□□□□□ -0.6
PHGDH-232ENST00000641947 PKD1P98161 4303 aa11.27□□□□□ -0.61
PHGDH-232ENST00000641947 A0A096LNI7 61 aa11.27□□□□□ -0.61
PHGDH-232ENST00000641947 TMEM126AQ9H061 195 aa11.27□□□□□ -0.61
PHGDH-232ENST00000641947 FUSP35637 526 aaKnown RBP eCLIP11.26□□□□□ -0.61
PHGDH-232ENST00000641947 TRBV20-1A0A075B6N2 111 aa11.26□□□□□ -0.61
PHGDH-232ENST00000641947 TRBV10-3A0A0K0K1G6 114 aa11.26□□□□□ -0.61
PHGDH-232ENST00000641947 S100A7L2Q5SY68 101 aa11.26□□□□□ -0.61
PHGDH-232ENST00000641947 C9orf163Q8N9P6 203 aa11.26□□□□□ -0.61
PHGDH-232ENST00000641947 FAM218AQ96MZ4 157 aa11.26□□□□□ -0.61
PHGDH-232ENST00000641947 PRO0461Q9UI25 63 aa11.26□□□□□ -0.61
PHGDH-232ENST00000641947 COX6CP09669 75 aa11.25□□□□□ -0.61
PHGDH-232ENST00000641947 PLA2G2DQ9UNK4 145 aa11.24□□□□□ -0.61
PHGDH-232ENST00000641947 LST1O00453 97 aa11.23□□□□□ -0.61
PHGDH-232ENST00000641947 IGKV2-24A0A0C4DH68 120 aa11.23□□□□□ -0.61
PHGDH-232ENST00000641947 C16orf90A8MZG2 172 aa11.23□□□□□ -0.61
PHGDH-232ENST00000641947 M0R378 163 aa11.23□□□□□ -0.61
PHGDH-232ENST00000641947 RYR2Q92736 4967 aa11.22□□□□□ -0.61
PHGDH-232ENST00000641947 RTL8CO15255 209 aa11.22□□□□□ -0.61
PHGDH-232ENST00000641947 CHTF8P0CG12 524 aa11.22□□□□□ -0.61
PHGDH-232ENST00000641947 ATXN8Q156A1 80 aa11.22□□□□□ -0.61
PHGDH-232ENST00000641947 SMCPP49901 116 aaPredicted RBP11.21□□□□□ -0.61
PHGDH-232ENST00000641947 TNP2Q05952 138 aa11.21□□□□□ -0.61
PHGDH-232ENST00000641947 C7orf33Q8WU49 177 aa11.21□□□□□ -0.61
PHGDH-232ENST00000641947 CBY1Q9Y3M2 126 aa11.21□□□□□ -0.61
PHGDH-232ENST00000641947 KMT2CQ8NEZ4 4911 aaKnown RBP11.21□□□□□ -0.61
PHGDH-232ENST00000641947 IGLV5-37A0A075B6J1 123 aa11.21□□□□□ -0.62
PHGDH-232ENST00000641947 SDIM1Q6ZPB5 146 aa11.21□□□□□ -0.62
PHGDH-232ENST00000641947 FAM19A5Q7Z5A7 132 aaPredicted RBP11.21□□□□□ -0.62
PHGDH-232ENST00000641947 DNAH8Q96JB1 4490 aa11.2□□□□□ -0.62
PHGDH-232ENST00000641947 C6orf99Q4VX62 202 aa11.2□□□□□ -0.62
PHGDH-232ENST00000641947 NKAPP1Q8N9T2 125 aa11.19□□□□□ -0.62
PHGDH-232ENST00000641947 TRAV23DV6A0A075B6W5 121 aa11.18□□□□□ -0.62
PHGDH-232ENST00000641947 A0A087WYN8 130 aa11.18□□□□□ -0.62
PHGDH-232ENST00000641947 PANO1I0J062 215 aa11.18□□□□□ -0.62
PHGDH-232ENST00000641947 A0A1W2PNN7 141 aa11.18□□□□□ -0.62
PHGDH-232ENST00000641947 C9JAW5 83 aa11.17□□□□□ -0.62
PHGDH-232ENST00000641947 C22orf24Q9Y442 160 aa11.17□□□□□ -0.62
PHGDH-232ENST00000641947 F8W1H4 67 aa11.16□□□□□ -0.62
PHGDH-232ENST00000641947 H0YGX0 51 aa11.15□□□□□ -0.62
PHGDH-232ENST00000641947 LINC00167Q96N53 147 aa11.15□□□□□ -0.62
PHGDH-232ENST00000641947 RPL37AP8A6NKH3 93 aa11.14□□□□□ -0.63
PHGDH-232ENST00000641947 ZNF73O43830 326 aaPredicted RBP11.13□□□□□ -0.63
PHGDH-232ENST00000641947 LCE6AA0A183 80 aa11.13□□□□□ -0.63
PHGDH-232ENST00000641947 SLC25A20O43772 301 aa11.13□□□□□ -0.63
PHGDH-232ENST00000641947 TRACP01848 142 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms