RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	CHTF8	P0CG12	524 aa		11.35	□□□□□ -0.59
SPIN3-238	ENST00000640421	PANO1	I0J062	215 aa		11.34	□□□□□ -0.59
SPIN3-238	ENST00000640421	GCSH	P23434	173 aa		11.34	□□□□□ -0.59
SPIN3-238	ENST00000640421	PTTG1IP	P53801	180 aa		11.34	□□□□□ -0.59
SPIN3-238	ENST00000640421		Q6ZVH6	145 aa		11.34	□□□□□ -0.59
SPIN3-238	ENST00000640421	PGPEP1	Q9NXJ5	209 aa		11.34	□□□□□ -0.59
SPIN3-238	ENST00000640421	IGKV2-24	A0A0C4DH68	120 aa		11.34	□□□□□ -0.59
SPIN3-238	ENST00000640421	LOC107984156	A0A0G2JMH3	177 aa		11.33	□□□□□ -0.6
SPIN3-238	ENST00000640421	C16orf90	A8MZG2	172 aa		11.33	□□□□□ -0.6
SPIN3-238	ENST00000640421	HSD52	Q0P140	79 aa		11.33	□□□□□ -0.6
SPIN3-238	ENST00000640421	ARL17A	Q8IVW1	177 aa		11.33	□□□□□ -0.6
SPIN3-238	ENST00000640421	TAL2	Q16559	108 aa		11.32	□□□□□ -0.6
SPIN3-238	ENST00000640421	CEND1	Q8N111	149 aa		11.32	□□□□□ -0.6
SPIN3-238	ENST00000640421	FAM168B	A1KXE4	195 aa		11.31	□□□□□ -0.6
SPIN3-238	ENST00000640421	IFITM1	P13164	125 aa		11.31	□□□□□ -0.6
SPIN3-238	ENST00000640421	FXYD2	P54710	66 aa		11.31	□□□□□ -0.6
SPIN3-238	ENST00000640421	LBH	Q53QV2	105 aa	Predicted RBP	11.31	□□□□□ -0.6
SPIN3-238	ENST00000640421	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.31	□□□□□ -0.6
SPIN3-238	ENST00000640421	SNHG12	Q9BXW3	62 aa		11.3	□□□□□ -0.6
SPIN3-238	ENST00000640421	EPPK1	P58107	5090 aa	Known RBP	11.3	□□□□□ -0.6
SPIN3-238	ENST00000640421	KRTAP10-1	P60331	282 aa		11.29	□□□□□ -0.6
SPIN3-238	ENST00000640421	KRTAP7-1	Q8IUC3	87 aa		11.29	□□□□□ -0.6
SPIN3-238	ENST00000640421		A0A1B0GV90	55 aa		11.29	□□□□□ -0.6
SPIN3-238	ENST00000640421	HINT1	P49773	126 aa	Predicted RBP	11.29	□□□□□ -0.6
SPIN3-238	ENST00000640421		A4D1N5	150 aa		11.28	□□□□□ -0.6
SPIN3-238	ENST00000640421	PRR3	P79522	188 aa	Known RBP	11.28	□□□□□ -0.6
SPIN3-238	ENST00000640421	SERTAD4-AS1	Q5TG53	156 aa		11.28	□□□□□ -0.6
SPIN3-238	ENST00000640421	BVES-AS1	Q5T3Y7	98 aa		11.27	□□□□□ -0.6
SPIN3-238	ENST00000640421		M0R143	59 aa		11.27	□□□□□ -0.61
SPIN3-238	ENST00000640421	SPACA4	Q8TDM5	124 aa		11.27	□□□□□ -0.61
SPIN3-238	ENST00000640421	PPDPF	Q9H3Y8	114 aa		11.27	□□□□□ -0.61
SPIN3-238	ENST00000640421		A0A1W2PNN7	141 aa		11.26	□□□□□ -0.61
SPIN3-238	ENST00000640421	FAM30A	Q9NZY2	134 aa		11.26	□□□□□ -0.61
SPIN3-238	ENST00000640421	PKIG	Q9Y2B9	76 aa		11.26	□□□□□ -0.61
SPIN3-238	ENST00000640421	VPREB1	P12018	145 aa		11.25	□□□□□ -0.61
SPIN3-238	ENST00000640421	RPL24	P83731	157 aa	Known RBP	11.25	□□□□□ -0.61
SPIN3-238	ENST00000640421	APOB	P04114	4563 aa	Known RBP	11.25	□□□□□ -0.61
SPIN3-238	ENST00000640421	IGKV2-28	A0A075B6P5	120 aa		11.25	□□□□□ -0.61
SPIN3-238	ENST00000640421	IGKV2D-28	P01615	120 aa		11.25	□□□□□ -0.61
SPIN3-238	ENST00000640421	COPS9	Q8WXC6	57 aa		11.25	□□□□□ -0.61
SPIN3-238	ENST00000640421	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.23	□□□□□ -0.61
SPIN3-238	ENST00000640421	NCR3	O14931	201 aa		11.23	□□□□□ -0.61
SPIN3-238	ENST00000640421	NDUFC2	O95298	119 aa		11.23	□□□□□ -0.61
SPIN3-238	ENST00000640421	LINC00474	Q9P2X8	69 aa		11.23	□□□□□ -0.61
SPIN3-238	ENST00000640421	PLA2G2D	Q9UNK4	145 aa		11.23	□□□□□ -0.61
SPIN3-238	ENST00000640421		Q6ZSA8	131 aa		11.22	□□□□□ -0.61
SPIN3-238	ENST00000640421	CFC1B	P0CG36	223 aa		11.21	□□□□□ -0.61
SPIN3-238	ENST00000640421	CFC1	P0CG37	223 aa		11.21	□□□□□ -0.61
SPIN3-238	ENST00000640421	BATF	Q16520	125 aa		11.21	□□□□□ -0.62
SPIN3-238	ENST00000640421	LINC00337	Q8N6G1	96 aa		11.21	□□□□□ -0.62
SPIN3-238	ENST00000640421	NHP2	Q9NX24	153 aa	Known RBP	11.21	□□□□□ -0.62
SPIN3-238	ENST00000640421		A0A087WYN8	130 aa		11.2	□□□□□ -0.62
SPIN3-238	ENST00000640421		K7ERJ3	54 aa		11.19	□□□□□ -0.62
SPIN3-238	ENST00000640421	IGLV5-37	A0A075B6J1	123 aa		11.19	□□□□□ -0.62
SPIN3-238	ENST00000640421	TMEM238L	A0A1B0GVL6	79 aa		11.19	□□□□□ -0.62
SPIN3-238	ENST00000640421		A6NJY4	79 aa		11.19	□□□□□ -0.62
SPIN3-238	ENST00000640421	DPH3	Q96FX2	82 aa		11.19	□□□□□ -0.62
SPIN3-238	ENST00000640421	C22orf24	Q9Y442	160 aa		11.19	□□□□□ -0.62
SPIN3-238	ENST00000640421	HAMP	P81172	84 aa		11.18	□□□□□ -0.62
SPIN3-238	ENST00000640421	EPM2A	B3EWF7	344 aa		11.17	□□□□□ -0.62
SPIN3-238	ENST00000640421		A0A1B0GWB2	263 aa		11.17	□□□□□ -0.62
SPIN3-238	ENST00000640421		M0QXV9	152 aa		11.17	□□□□□ -0.62
SPIN3-238	ENST00000640421	GAGE10	A6NGK3	116 aa		11.16	□□□□□ -0.62
SPIN3-238	ENST00000640421	NKAPP1	Q8N9T2	125 aa		11.16	□□□□□ -0.62
SPIN3-238	ENST00000640421	C7orf33	Q8WU49	177 aa		11.16	□□□□□ -0.62
SPIN3-238	ENST00000640421	PLAC8	Q9NZF1	115 aa		11.16	□□□□□ -0.62
SPIN3-238	ENST00000640421		A0A0B4J2C4	111 aa		11.15	□□□□□ -0.62
SPIN3-238	ENST00000640421	TRBV10-2	A0A0K0K1G8	114 aa		11.15	□□□□□ -0.62
SPIN3-238	ENST00000640421		M0R378	163 aa		11.15	□□□□□ -0.63
SPIN3-238	ENST00000640421	SCX	Q7RTU7	201 aa		11.15	□□□□□ -0.63
SPIN3-238	ENST00000640421	PHF5A	Q7RTV0	110 aa	Known RBP	11.15	□□□□□ -0.63
SPIN3-238	ENST00000640421	CIRBP-AS1	Q8TBR5	109 aa		11.15	□□□□□ -0.63
SPIN3-238	ENST00000640421	MRPL55	Q7Z7F7	128 aa	Known RBP	11.14	□□□□□ -0.63
SPIN3-238	ENST00000640421		A6NDN8	102 aa		11.13	□□□□□ -0.63
SPIN3-238	ENST00000640421	LINC00167	Q96N53	147 aa		11.13	□□□□□ -0.63
SPIN3-238	ENST00000640421	TRBV10-3	A0A0K0K1G6	114 aa		11.12	□□□□□ -0.63
SPIN3-238	ENST00000640421	IGLV6-57	P01721	117 aa		11.12	□□□□□ -0.63
SPIN3-238	ENST00000640421	OR13C6P	Q8NH95	151 aa		11.12	□□□□□ -0.63
SPIN3-238	ENST00000640421	RAB37	Q96AX2	223 aa		11.12	□□□□□ -0.63
SPIN3-238	ENST00000640421	RPL13A	P40429	203 aa	Known RBP	11.12	□□□□□ -0.63
SPIN3-238	ENST00000640421	KRTAP11-1	Q8IUC1	163 aa		11.12	□□□□□ -0.63
SPIN3-238	ENST00000640421	TRAV13-2	A0A0B4J235	113 aa		11.11	□□□□□ -0.63
SPIN3-238	ENST00000640421	RPL37AP8	A6NKH3	93 aa		11.11	□□□□□ -0.63
SPIN3-238	ENST00000640421	PRO1854	Q9UHT4	67 aa		11.11	□□□□□ -0.63
SPIN3-238	ENST00000640421	S100A7L2	Q5SY68	101 aa		11.1	□□□□□ -0.63
SPIN3-238	ENST00000640421	VPS13B	Q7Z7G8	4022 aa		11.1	□□□□□ -0.63
SPIN3-238	ENST00000640421		H7C2G1	150 aa		11.09	□□□□□ -0.63
SPIN3-238	ENST00000640421	IGLV1-50	A0A075B6I6	118 aa		11.08	□□□□□ -0.64
SPIN3-238	ENST00000640421	COL5A1-AS1	Q5SY13	56 aa		11.08	□□□□□ -0.64
SPIN3-238	ENST00000640421	TMEM126A	Q9H061	195 aa		11.08	□□□□□ -0.64
SPIN3-238	ENST00000640421	HSPG2	P98160	4391 aa		11.08	□□□□□ -0.64
SPIN3-238	ENST00000640421	XG	P55808	180 aa		11.08	□□□□□ -0.64
SPIN3-238	ENST00000640421	FAT1	Q14517	4588 aa		11.07	□□□□□ -0.64
SPIN3-238	ENST00000640421	RYR1	P21817	5038 aa		11.06	□□□□□ -0.64
SPIN3-238	ENST00000640421	TSPAN13	O95857	204 aa		11.06	□□□□□ -0.64
SPIN3-238	ENST00000640421	SMIM11B	Q8TCY0	68 aa		11.06	□□□□□ -0.64
SPIN3-238	ENST00000640421	KIAA1109	Q2LD37	5005 aa		11.05	□□□□□ -0.64
SPIN3-238	ENST00000640421	TAX1BP3	O14907	124 aa		11.04	□□□□□ -0.64
SPIN3-238	ENST00000640421	TRAV23DV6	A0A075B6W5	121 aa		11.04	□□□□□ -0.64
SPIN3-238	ENST00000640421	UBE2B	P63146	152 aa		11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 78 ms