RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 CCDC179H3BU77 68 aa11.12□□□□□ -0.63
CLN5-208ENST00000636183 FN1P02751 2386 aaKnown RBP11.11□□□□□ -0.63
CLN5-208ENST00000636183 EPM2AB3EWF7 344 aa11.11□□□□□ -0.63
CLN5-208ENST00000636183 C6orf48Q9UBA6 75 aa11.1□□□□□ -0.63
CLN5-208ENST00000636183 Q8NBF4 154 aa11.09□□□□□ -0.63
CLN5-208ENST00000636183 LINC01561Q8N1V8 128 aa11.09□□□□□ -0.63
CLN5-208ENST00000636183 SMIM29Q86T20 159 aa11.07□□□□□ -0.64
CLN5-208ENST00000636183 ABCA12Q86UK0 2595 aa11.05□□□□□ -0.64
CLN5-208ENST00000636183 DNAH10OSP0CZ25 163 aa11.05□□□□□ -0.64
CLN5-208ENST00000636183 C11orf72Q8NBR9 251 aa11.05□□□□□ -0.64
CLN5-208ENST00000636183 F8P00451 2351 aa11.05□□□□□ -0.64
CLN5-208ENST00000636183 MUC22E2RYF6 1773 aaPredicted RBP11.04□□□□□ -0.64
CLN5-208ENST00000636183 CPAMD8Q8IZJ3 1885 aa11.04□□□□□ -0.64
CLN5-208ENST00000636183 SMIM26A0A096LP01 95 aa11.03□□□□□ -0.64
CLN5-208ENST00000636183 C1orf195Q5TG92 126 aa11.03□□□□□ -0.64
CLN5-208ENST00000636183 APLNQ9ULZ1 77 aa11.03□□□□□ -0.64
CLN5-208ENST00000636183 M0R2T5 61 aa11.03□□□□□ -0.64
CLN5-208ENST00000636183 LINC01554Q52M75 96 aa11.02□□□□□ -0.65
CLN5-208ENST00000636183 TLN2Q9Y4G6 2542 aa11.02□□□□□ -0.65
CLN5-208ENST00000636183 LINC00304Q8N9R0 145 aa11□□□□□ -0.65
CLN5-208ENST00000636183 ST20-AS1Q8NBB2 130 aa11□□□□□ -0.65
CLN5-208ENST00000636183 H3BNG1 76 aa11□□□□□ -0.65
CLN5-208ENST00000636183 BCE1O60756 84 aa10.99□□□□□ -0.65
CLN5-208ENST00000636183 CHD8Q9HCK8 2581 aa10.99□□□□□ -0.65
CLN5-208ENST00000636183 TMEM254Q8TBM7 123 aa10.99□□□□□ -0.65
CLN5-208ENST00000636183 LINC00476Q8WZB0 136 aa10.99□□□□□ -0.65
CLN5-208ENST00000636183 SPINT4Q6UDR6 99 aa10.98□□□□□ -0.65
CLN5-208ENST00000636183 TM2D3Q9BRN9 247 aa10.97□□□□□ -0.65
CLN5-208ENST00000636183 K7EIL1 84 aa10.97□□□□□ -0.65
CLN5-208ENST00000636183 SPAG11AQ6PDA7 123 aa10.97□□□□□ -0.65
CLN5-208ENST00000636183 Q8NAQ8 132 aa10.97□□□□□ -0.65
CLN5-208ENST00000636183 SPATA3Q8NHX4 192 aa10.97□□□□□ -0.65
CLN5-208ENST00000636183 TP53AIP1Q9HCN2 124 aa10.97□□□□□ -0.65
CLN5-208ENST00000636183 IGLV5-37A0A075B6J1 123 aa10.97□□□□□ -0.65
CLN5-208ENST00000636183 FAM168BA1KXE4 195 aa10.96□□□□□ -0.66
CLN5-208ENST00000636183 LINC00846Q9NV44 126 aa10.95□□□□□ -0.66
CLN5-208ENST00000636183 IGLV6-57P01721 117 aa10.93□□□□□ -0.66
CLN5-208ENST00000636183 KRTAP10-11P60412 298 aa10.93□□□□□ -0.66
CLN5-208ENST00000636183 URB1-AS1Q96HZ7 61 aa10.93□□□□□ -0.66
CLN5-208ENST00000636183 OBSCN-AS1Q96MR7 158 aa10.93□□□□□ -0.66
CLN5-208ENST00000636183 IGHV3OR16-9A0A0B4J2B5 98 aa10.92□□□□□ -0.66
CLN5-208ENST00000636183 RBM12B-AS1Q9P1G2 102 aa10.92□□□□□ -0.66
CLN5-208ENST00000636183 Q6ZRX8 168 aa10.91□□□□□ -0.66
CLN5-208ENST00000636183 DSCR10P59022 87 aa10.9□□□□□ -0.66
CLN5-208ENST00000636183 FAM19A4Q96LR4 140 aa10.89□□□□□ -0.67
CLN5-208ENST00000636183 ELOF1P60002 83 aaKnown RBP10.88□□□□□ -0.67
CLN5-208ENST00000636183 CXCL6P80162 114 aa10.88□□□□□ -0.67
CLN5-208ENST00000636183 SSBP3-AS1Q7Z2R9 100 aa10.88□□□□□ -0.67
CLN5-208ENST00000636183 YPEL4Q96NS1 127 aa10.87□□□□□ -0.67
CLN5-208ENST00000636183 TRAV22A0A0B4J277 110 aa10.85□□□□□ -0.67
CLN5-208ENST00000636183 LINC00336Q6ZUF6 198 aa10.84□□□□□ -0.67
CLN5-208ENST00000636183 COL27A1Q8IZC6 1860 aaPredicted RBP10.84□□□□□ -0.67
CLN5-208ENST00000636183 GVQW2A0A096LPI5 108 aaPredicted RBP10.84□□□□□ -0.67
CLN5-208ENST00000636183 COX8CQ7Z4L0 72 aa10.84□□□□□ -0.67
CLN5-208ENST00000636183 ANAPC11Q9NYG5 84 aa10.83□□□□□ -0.68
CLN5-208ENST00000636183 LINC00528Q8N1L1 170 aa10.83□□□□□ -0.68
CLN5-208ENST00000636183 IGLV5-39A0A0G2JS06 123 aa10.82□□□□□ -0.68
CLN5-208ENST00000636183 C10orf142B7Z368 130 aa10.81□□□□□ -0.68
CLN5-208ENST00000636183 COL4A2P08572 1712 aa10.8□□□□□ -0.68
CLN5-208ENST00000636183 A0A087WTM6 91 aa10.79□□□□□ -0.68
CLN5-208ENST00000636183 PTPRBP23467 1997 aa10.78□□□□□ -0.68
CLN5-208ENST00000636183 A0A096LNJ9 63 aa10.78□□□□□ -0.68
CLN5-208ENST00000636183 C8orf87E5RJ46 101 aa10.78□□□□□ -0.68
CLN5-208ENST00000636183 K7EQZ3 153 aa10.77□□□□□ -0.69
CLN5-208ENST00000636183 FASNP49327 2511 aaKnown RBP10.77□□□□□ -0.69
CLN5-208ENST00000636183 LINC00310P59036 64 aa10.76□□□□□ -0.69
CLN5-208ENST00000636183 USP9XQ93008 2570 aaPredicted RBP10.75□□□□□ -0.69
CLN5-208ENST00000636183 ACANP16112 2415 aa10.75□□□□□ -0.69
CLN5-208ENST00000636183 A0A0D9SG42 100 aa10.74□□□□□ -0.69
CLN5-208ENST00000636183 LINC01600Q96MT4 127 aa10.74□□□□□ -0.69
CLN5-208ENST00000636183 SETD2Q9BYW2 2564 aaPredicted RBP10.74□□□□□ -0.69
CLN5-208ENST00000636183 MRPL34Q9BQ48 92 aaKnown RBP10.73□□□□□ -0.69
CLN5-208ENST00000636183 POLQO75417 2590 aa10.73□□□□□ -0.69
CLN5-208ENST00000636183 C9orf129Q5T035 196 aaKnown RBP10.73□□□□□ -0.69
CLN5-208ENST00000636183 Q6ZSA8 131 aa10.73□□□□□ -0.69
CLN5-208ENST00000636183 FAM218AQ96MZ4 157 aa10.72□□□□□ -0.69
CLN5-208ENST00000636183 ZNF861PO60384 105 aa10.72□□□□□ -0.69
CLN5-208ENST00000636183 ZNF575Q86XF7 245 aa10.72□□□□□ -0.69
CLN5-208ENST00000636183 SRCAPQ6ZRS2 3230 aa10.72□□□□□ -0.69
CLN5-208ENST00000636183 CRIPTQ9P021 101 aa10.72□□□□□ -0.69
CLN5-208ENST00000636183 CSNK1G2-AS1Q8NCQ2 148 aa10.7□□□□□ -0.7
CLN5-208ENST00000636183 MTORP42345 2549 aa10.69□□□□□ -0.7
CLN5-208ENST00000636183 A8MWP4 228 aa10.69□□□□□ -0.7
CLN5-208ENST00000636183 KRTAP10-3P60369 221 aa10.69□□□□□ -0.7
CLN5-208ENST00000636183 LOC101927531A0A1B0GV80 90 aa10.68□□□□□ -0.7
CLN5-208ENST00000636183 Q6ZQT0 140 aa10.68□□□□□ -0.7
CLN5-208ENST00000636183 IGLV1-50A0A075B6I6 118 aa10.66□□□□□ -0.7
CLN5-208ENST00000636183 TRBV7-4A0A0J9YYF1 115 aa10.66□□□□□ -0.7
CLN5-208ENST00000636183 C15orf56Q8N910 161 aa10.66□□□□□ -0.7
CLN5-208ENST00000636183 VPREB1P12018 145 aa10.65□□□□□ -0.71
CLN5-208ENST00000636183 C19orf73Q9NVV2 129 aa10.65□□□□□ -0.71
CLN5-208ENST00000636183 A0A0G2JQZ4 141 aa10.64□□□□□ -0.71
CLN5-208ENST00000636183 A0A1W2PNN7 141 aa10.64□□□□□ -0.71
CLN5-208ENST00000636183 IGLV7-43P04211 117 aa10.63□□□□□ -0.71
CLN5-208ENST00000636183 PKD1L2Q7Z442 2459 aa10.63□□□□□ -0.71
CLN5-208ENST00000636183 IGLV5-48A0A075B6I7 105 aa10.62□□□□□ -0.71
CLN5-208ENST00000636183 H3BPC8 53 aa10.62□□□□□ -0.71
CLN5-208ENST00000636183 A0A1B0GW54 56 aa10.61□□□□□ -0.71
CLN5-208ENST00000636183 IGLV5-45A0A087WSX0 123 aa10.61□□□□□ -0.71
CLN5-208ENST00000636183 IGLV7-46A0A075B6I9 117 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms