RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 MEF2BQ02080 365 aaPredicted RBP1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 ZNF345Q14585 488 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 KRTAP25-1Q3LHN0 102 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 RASL11AQ6T310 242 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 C9orf62Q8N4C0 152 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 NUP35Q8NFH5 326 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 OR5A1Q8NGJ0 315 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 MBD3L1Q8WWY6 194 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 S100ZQ8WXG8 99 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 LINC00474Q9P2X8 69 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 TRAV1-1A0A0B4J248 108 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 IGHV1-58A0A0C4DH39 117 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 TRBV6-5A0A0K0K1A5 114 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 TRBV27A0A0K0K1C4 114 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 LINC00959A0A1B0GUT2 108 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 TMEM262E9PQX1 116 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 SLC25A20O43772 301 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 APOMO95445 188 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 IFNA7P01567 189 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 IGLV6-57P01721 117 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 S100A6P06703 90 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 FGF6P10767 208 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 AKR1C3P42330 323 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 NKX2-5P52952 324 aaPredicted RBP1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 LINC00313P59037 77 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 UBE2G1P62253 170 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 KRTAP19-2Q3LHN2 52 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 SPANXN1Q5VSR9 72 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 ZNF664Q8N3J9 261 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 RPL39LQ96EH5 51 aaKnown RBP1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 LINC00526Q96FQ7 95 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 CARD19Q96LW7 228 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 MAP1LC3AQ9H492 121 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 DPH3P1Q9H4G8 78 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 NIT2Q9NQR4 276 aa1.25□□□□□ -2.21
SMARCB1-208ENST00000634926 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 FXYD6-FXYD2A0A087WZ82 144 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 BORCS7-ASMTA0A0B4J1R7 106 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 TRAV26-2A0A0B4J265 109 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 LOC107984640A0A0U1RRK4 108 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 IGKV2-29A2NJV5 120 aaPredicted RBP1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 LINC00862A6NCI5 91 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 UMAD1C9J7I0 102 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 F2Z2F3 143 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 CCL25O15444 150 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 MGPP08493 103 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 TRGC1P0CF51 173 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 BCL2P10415 239 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 DDTP30046 118 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 RAB5CP51148 216 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 POLR2KP53803 58 aaKnown RBP1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 HERVK_113P63121 156 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 CCL20P78556 96 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 TPRXLQ17RH7 258 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 RGS21Q2M5E4 152 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 MRPL51Q4U2R6 128 aaKnown RBP1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 C9orf116Q5BN46 136 aaPredicted RBP1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 AKR1C8PQ5T2L2 129 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 LYZL1Q6UWQ5 148 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 PHF5AQ7RTV0 110 aaKnown RBP1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 ATP5L2Q7Z4Y8 100 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 BAGE2Q86Y30 109 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 KRTAP13-1Q8IUC0 172 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 KCNRGQ8N5I3 272 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 LINC00304Q8N9R0 145 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 DIRC1Q969H9 104 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 RNASE7Q9H1E1 156 aaKnown RBP1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 MANBALQ9NQG1 85 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 CDC42SE2Q9NRR3 84 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 MRPL35Q9NZE8 188 aaKnown RBP1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 PKIGQ9Y2B9 76 aa1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 CARHSP1Q9Y2V2 147 aaKnown RBP1.24□□□□□ -2.21
SMARCB1-208ENST00000634926 SDHAF1A6NFY7 115 aa1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 HMSDA8MTL9 139 aa1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 SMIM17P0DL12 118 aa1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 XCL1P47992 114 aa1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 FOXA3P55318 350 aaPredicted RBP1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 DEFA1P59665 94 aa1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 DEFA3P59666 94 aa1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 RPS20P60866 119 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 SS18Q15532 418 aa1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 Q6ZUT4 128 aa1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 OR2D3Q8NGH3 330 aa1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 OR10D4PQ8NGN7 298 aa1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 FAM213BQ8TBF2 198 aa1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 TIMM21Q9BVV7 248 aa1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 HIGD2AQ9BW72 106 aa1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 SMDT1Q9H4I9 107 aa1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 C6orf48Q9UBA6 75 aa1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 UBE2D4Q9Y2X8 147 aa1.23□□□□□ -2.21
SMARCB1-208ENST00000634926 C7orf77A4D0Y5 90 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 C1orf196B1AJZ1 125 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 I3L3M4 83 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 COX7A2LO14548 114 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 UBE2L6O14933 153 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 ARPC5O15511 151 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 PDE6DO43924 150 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 PFDN1O60925 122 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 MT-ND6P03923 174 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms