RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 TEX261Q6UWH6 196 aa1.01□□□□□ -2.25
SCARNA4.1-201ENST00000628597 FAM107BQ9H098 131 aa1.01□□□□□ -2.25
SCARNA4.1-201ENST00000628597 KCNQ1DNQ9H478 68 aa1.01□□□□□ -2.25
SCARNA4.1-201ENST00000628597 ST20Q9HBF5 79 aa1.01□□□□□ -2.25
SCARNA4.1-201ENST00000628597 KCNIP2Q9NS61 270 aa1.01□□□□□ -2.25
SCARNA4.1-201ENST00000628597 DISC1C4P0D8 188 aa1□□□□□ -2.25
SCARNA4.1-201ENST00000628597 RAB3DO95716 219 aa1□□□□□ -2.25
SCARNA4.1-201ENST00000628597 S100A11P31949 105 aa1□□□□□ -2.25
SCARNA4.1-201ENST00000628597 PFN2P35080 140 aa1□□□□□ -2.25
SCARNA4.1-201ENST00000628597 MLLT11Q13015 90 aaPredicted RBP1□□□□□ -2.25
SCARNA4.1-201ENST00000628597 NPCDR1Q9BY65 106 aa1□□□□□ -2.25
SCARNA4.1-201ENST00000628597 A0A1B0GWB2 263 aa0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 TRDV1A0A1B0GX56 115 aa0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 A0A1W2PPV4 95 aa0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 ANKRD20A5PA0PJZ0 165 aa0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 C17orf112F2Z3M2 114 aa0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 UBE2G1P62253 170 aa0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 HBG1P69891 147 aa0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 HBG2P69892 147 aa0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 ATP6V1FQ16864 119 aa0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 ZFP1Q6P2D0 407 aa0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 CSAG1Q6PB30 78 aa0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 SMIM15Q7Z3B0 74 aa0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 NKX6-2Q9C056 277 aaPredicted RBP0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 RNASE7Q9H1E1 156 aaKnown RBP0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 SND1-IT1Q9HBX3 110 aa0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 MCUBQ9NWR8 336 aa0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 RAB26Q9ULW5 256 aa0.99□□□□□ -2.25
SCARNA4.1-201ENST00000628597 LST1O00453 97 aa0.98□□□□□ -2.25
SCARNA4.1-201ENST00000628597 SERF1AO75920 110 aa0.98□□□□□ -2.25
SCARNA4.1-201ENST00000628597 SPRR1BP22528 89 aa0.98□□□□□ -2.25
SCARNA4.1-201ENST00000628597 UBE2NLQ5JXB2 153 aa0.98□□□□□ -2.25
SCARNA4.1-201ENST00000628597 Q6ZRX8 168 aa0.98□□□□□ -2.25
SCARNA4.1-201ENST00000628597 LINC00518Q8N0U6 118 aa0.98□□□□□ -2.25
SCARNA4.1-201ENST00000628597 FMC1Q96HJ9 113 aa0.98□□□□□ -2.25
SCARNA4.1-201ENST00000628597 ATP6V1G3Q96LB4 118 aa0.98□□□□□ -2.25
SCARNA4.1-201ENST00000628597 CNBD2Q96M20 576 aa0.98□□□□□ -2.25
SCARNA4.1-201ENST00000628597 VCX3BQ9H321 246 aa0.98□□□□□ -2.25
SCARNA4.1-201ENST00000628597 VCX3AQ9NNX9 186 aa0.98□□□□□ -2.25
SCARNA4.1-201ENST00000628597 TRBV6-5A0A0K0K1A5 114 aa0.97□□□□□ -2.25
SCARNA4.1-201ENST00000628597 A4D1N5 150 aa0.97□□□□□ -2.25
SCARNA4.1-201ENST00000628597 A8MUN3 132 aa0.97□□□□□ -2.25
SCARNA4.1-201ENST00000628597 F2Z2F3 143 aa0.97□□□□□ -2.25
SCARNA4.1-201ENST00000628597 PPP1R2P9O14990 202 aa0.97□□□□□ -2.25
SCARNA4.1-201ENST00000628597 ATP6V1G1O75348 118 aa0.97□□□□□ -2.25
SCARNA4.1-201ENST00000628597 ATP5LO75964 103 aa0.97□□□□□ -2.25
SCARNA4.1-201ENST00000628597 CXCL6P80162 114 aa0.97□□□□□ -2.25
SCARNA4.1-201ENST00000628597 TAL2Q16559 108 aa0.97□□□□□ -2.25
SCARNA4.1-201ENST00000628597 LINC00299Q6ZSB3 139 aa0.97□□□□□ -2.25
SCARNA4.1-201ENST00000628597 STX12Q86Y82 276 aa0.97□□□□□ -2.25
SCARNA4.1-201ENST00000628597 PRRT1Q99946 306 aa0.97□□□□□ -2.25
SCARNA4.1-201ENST00000628597 SPANXA1Q9NS26 97 aa0.97□□□□□ -2.25
SCARNA4.1-201ENST00000628597 DHRS4-AS1Q9P1J3 65 aa0.97□□□□□ -2.25
SCARNA4.1-201ENST00000628597 TRBV27A0A0K0K1C4 114 aa0.96□□□□□ -2.26
SCARNA4.1-201ENST00000628597 C7orf66A4D0T2 115 aa0.96□□□□□ -2.26
SCARNA4.1-201ENST00000628597 SDC2P34741 201 aa0.96□□□□□ -2.26
SCARNA4.1-201ENST00000628597 RPL35P42766 123 aaKnown RBP0.96□□□□□ -2.26
SCARNA4.1-201ENST00000628597 LINC00313P59037 77 aa0.96□□□□□ -2.26
SCARNA4.1-201ENST00000628597 MRPS36P82909 103 aaKnown RBP0.96□□□□□ -2.26
SCARNA4.1-201ENST00000628597 TMEM229BQ8NBD8 167 aa0.96□□□□□ -2.26
SCARNA4.1-201ENST00000628597 C2orf88Q9BSF0 95 aa0.96□□□□□ -2.26
SCARNA4.1-201ENST00000628597 C9orf16Q9BUW7 83 aa0.96□□□□□ -2.26
SCARNA4.1-201ENST00000628597 TMEM191AQ9H0A3 160 aa0.96□□□□□ -2.26
SCARNA4.1-201ENST00000628597 PRO0461Q9UI25 63 aa0.96□□□□□ -2.26
SCARNA4.1-201ENST00000628597 SCP2D1Q9UJQ7 156 aa0.96□□□□□ -2.26
SCARNA4.1-201ENST00000628597 TRBV10-3A0A0K0K1G6 114 aa0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 D6R8Y8 96 aa0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 F8WEM9 126 aa0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 PEX7O00628 323 aa0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 HMGB3O15347 200 aaKnown RBP0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 ATP5HO75947 161 aa0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 GNAO1P09471 354 aa0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 PVALBP20472 110 aaPredicted RBP0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 HINT1P49773 126 aaPredicted RBP0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 POLR2KP53803 58 aaKnown RBP0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 HERV-K104P63124 156 aa0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 TMEM128Q5BJH2 165 aa0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 LCE3EQ5T5B0 92 aa0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 DEFB105AQ8NG35 78 aa0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 COX7B2Q8TF08 81 aa0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 HIST1H2BAQ96A08 127 aa0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 TNFSF18Q9UNG2 199 aa0.95□□□□□ -2.26
SCARNA4.1-201ENST00000628597 NCR3O14931 201 aa0.94□□□□□ -2.26
SCARNA4.1-201ENST00000628597 IFI27P40305 119 aaPredicted RBP0.94□□□□□ -2.26
SCARNA4.1-201ENST00000628597 TEX43Q6ZNM6 134 aa0.94□□□□□ -2.26
SCARNA4.1-201ENST00000628597 AMELXQ99217 191 aa0.94□□□□□ -2.26
SCARNA4.1-201ENST00000628597 TMEM167BQ9NRX6 74 aa0.94□□□□□ -2.26
SCARNA4.1-201ENST00000628597 LSM5Q9Y4Y9 91 aaKnown RBP0.94□□□□□ -2.26
SCARNA4.1-201ENST00000628597 TEX49A0A1B0GTD5 131 aa0.93□□□□□ -2.26
SCARNA4.1-201ENST00000628597 SFT2D2O95562 160 aa0.93□□□□□ -2.26
SCARNA4.1-201ENST00000628597 LTAP01374 205 aa0.93□□□□□ -2.26
SCARNA4.1-201ENST00000628597 IGLC6P0CF74 106 aa0.93□□□□□ -2.26
SCARNA4.1-201ENST00000628597 AKAIN1P0CW23 69 aa0.93□□□□□ -2.26
SCARNA4.1-201ENST00000628597 VBP1P61758 197 aa0.93□□□□□ -2.26
SCARNA4.1-201ENST00000628597 RPL39P62891 51 aaKnown RBP0.93□□□□□ -2.26
SCARNA4.1-201ENST00000628597 SEC11AP67812 179 aa0.93□□□□□ -2.26
SCARNA4.1-201ENST00000628597 COX17Q14061 63 aa0.93□□□□□ -2.26
SCARNA4.1-201ENST00000628597 C8orf59Q8N0T1 100 aaPredicted RBP0.93□□□□□ -2.26
SCARNA4.1-201ENST00000628597 DSCR8Q96T75 97 aa0.93□□□□□ -2.26
SCARNA4.1-201ENST00000628597 C10orf95Q9H7T3 257 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms