RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 A0A1B0GU69 56 aa6.19□□□□□ -1.42
VCL-206ENST00000623461 C8orf87E5RJ46 101 aa6.19□□□□□ -1.42
VCL-206ENST00000623461 ACYP2P14621 99 aa6.19□□□□□ -1.42
VCL-206ENST00000623461 Q9UF83 564 aa6.19□□□□□ -1.42
VCL-206ENST00000623461 KLK9Q2XQG4 91 aa6.18□□□□□ -1.42
VCL-206ENST00000623461 DEFB116Q30KQ4 102 aa6.18□□□□□ -1.42
VCL-206ENST00000623461 ABCA12Q86UK0 2595 aa6.18□□□□□ -1.42
VCL-206ENST00000623461 Q6ZRU5 148 aa6.18□□□□□ -1.42
VCL-206ENST00000623461 H7BZZ5 65 aa6.18□□□□□ -1.42
VCL-206ENST00000623461 Q8NBF4 154 aa6.17□□□□□ -1.42
VCL-206ENST00000623461 AVPP01185 164 aa6.17□□□□□ -1.42
VCL-206ENST00000623461 LYPD5Q6UWN5 251 aa6.15□□□□□ -1.42
VCL-206ENST00000623461 C1orf134Q5TEV5 83 aa6.15□□□□□ -1.42
VCL-206ENST00000623461 JMJD1CQ15652 2540 aa6.15□□□□□ -1.43
VCL-206ENST00000623461 A8MUN3 132 aa6.14□□□□□ -1.43
VCL-206ENST00000623461 TLN1Q9Y490 2541 aaKnown RBP6.14□□□□□ -1.43
VCL-206ENST00000623461 M0R2N4 97 aa6.14□□□□□ -1.43
VCL-206ENST00000623461 ANKRD17O75179 2603 aaKnown RBP6.14□□□□□ -1.43
VCL-206ENST00000623461 TRAV22A0A0B4J277 110 aa6.14□□□□□ -1.43
VCL-206ENST00000623461 ATP11AUNQ6ZP68 121 aa6.14□□□□□ -1.43
VCL-206ENST00000623461 C22orf24Q9Y442 160 aa6.13□□□□□ -1.43
VCL-206ENST00000623461 ZNF462Q96JM2 2506 aa6.13□□□□□ -1.43
VCL-206ENST00000623461 KTN1-AS1Q86SY8 53 aa6.13□□□□□ -1.43
VCL-206ENST00000623461 C6orf48Q9UBA6 75 aa6.13□□□□□ -1.43
VCL-206ENST00000623461 C16orf95Q9H693 158 aa6.13□□□□□ -1.43
VCL-206ENST00000623461 FAM229AH3BQW9 127 aa6.12□□□□□ -1.43
VCL-206ENST00000623461 IGLV6-57P01721 117 aa6.12□□□□□ -1.43
VCL-206ENST00000623461 PRR15Q8IV56 129 aa6.12□□□□□ -1.43
VCL-206ENST00000623461 FLG2Q5D862 2391 aaPredicted RBP6.12□□□□□ -1.43
VCL-206ENST00000623461 GVQW2A0A096LPI5 108 aaPredicted RBP6.12□□□□□ -1.43
VCL-206ENST00000623461 TRBV7-4A0A0J9YYF1 115 aa6.12□□□□□ -1.43
VCL-206ENST00000623461 RETNLBQ9BQ08 111 aa6.12□□□□□ -1.43
VCL-206ENST00000623461 CIRBP-AS1Q8TBR5 109 aa6.11□□□□□ -1.43
VCL-206ENST00000623461 CDSNQ15517 529 aa6.11□□□□□ -1.43
VCL-206ENST00000623461 Q6ZRX8 168 aa6.1□□□□□ -1.43
VCL-206ENST00000623461 C7orf65Q6ZTY9 151 aa6.1□□□□□ -1.43
VCL-206ENST00000623461 COA5Q86WW8 74 aa6.09□□□□□ -1.43
VCL-206ENST00000623461 PRO3102Q9H379 93 aa6.09□□□□□ -1.43
VCL-206ENST00000623461 LOC101927531A0A1B0GV80 90 aa6.09□□□□□ -1.43
VCL-206ENST00000623461 LINC00476Q8WZB0 136 aa6.09□□□□□ -1.43
VCL-206ENST00000623461 LCA10Q71F78 164 aa6.09□□□□□ -1.44
VCL-206ENST00000623461 LINC00167Q96N53 147 aa6.09□□□□□ -1.44
VCL-206ENST00000623461 NCOR2Q9Y618 2525 aa6.08□□□□□ -1.44
VCL-206ENST00000623461 PRLHP81277 87 aa6.08□□□□□ -1.44
VCL-206ENST00000623461 PIEZO2Q9H5I5 2752 aa6.07□□□□□ -1.44
VCL-206ENST00000623461 EIF4EBP3O60516 100 aaPredicted RBP6.07□□□□□ -1.44
VCL-206ENST00000623461 SPINK1P00995 79 aa6.06□□□□□ -1.44
VCL-206ENST00000623461 MOBPQ13875 183 aa6.06□□□□□ -1.44
VCL-206ENST00000623461 LINC01556Q5JQF7 62 aa6.06□□□□□ -1.44
VCL-206ENST00000623461 OBSCN-AS1Q96MR7 158 aa6.06□□□□□ -1.44
VCL-206ENST00000623461 A8MWP4 228 aa6.05□□□□□ -1.44
VCL-206ENST00000623461 H3BNG1 76 aa6.05□□□□□ -1.44
VCL-206ENST00000623461 K7EQZ3 153 aa6.05□□□□□ -1.44
VCL-206ENST00000623461 PKD1L2Q7Z442 2459 aa6.04□□□□□ -1.44
VCL-206ENST00000623461 A0A1W2PPR1 153 aa6.04□□□□□ -1.44
VCL-206ENST00000623461 Q1T7F1 81 aa6.03□□□□□ -1.44
VCL-206ENST00000623461 IGF2RP11717 2491 aa6.03□□□□□ -1.44
VCL-206ENST00000623461 PLA2G1BP04054 148 aaKnown RBP6.03□□□□□ -1.44
VCL-206ENST00000623461 SPANXA2-OT1Q8N9U9 137 aa6.03□□□□□ -1.44
VCL-206ENST00000623461 MTORP42345 2549 aa6.03□□□□□ -1.44
VCL-206ENST00000623461 UQCR11O14957 56 aa6.02□□□□□ -1.45
VCL-206ENST00000623461 LINC00528Q8N1L1 170 aa6.02□□□□□ -1.45
VCL-206ENST00000623461 X6R8D5 127 aa6.02□□□□□ -1.45
VCL-206ENST00000623461 OXLD1Q5BKU9 147 aa6□□□□□ -1.45
VCL-206ENST00000623461 RPL37AP61513 92 aaKnown RBP6□□□□□ -1.45
VCL-206ENST00000623461 Q5XG85 94 aa6□□□□□ -1.45
VCL-206ENST00000623461 ST20-AS1Q8NBB2 130 aa6□□□□□ -1.45
VCL-206ENST00000623461 KCNQ1DNQ9H478 68 aa6□□□□□ -1.45
VCL-206ENST00000623461 CDC42SE1Q9NRR8 79 aa6□□□□□ -1.45
VCL-206ENST00000623461 IGKV2D-30A0A075B6S6 120 aa6□□□□□ -1.45
VCL-206ENST00000623461 IGKV2-30P06310 120 aa6□□□□□ -1.45
VCL-206ENST00000623461 C9orf129Q5T035 196 aaKnown RBP5.99□□□□□ -1.45
VCL-206ENST00000623461 J3QL48 77 aa5.98□□□□□ -1.45
VCL-206ENST00000623461 ANKRD11Q6UB99 2663 aaPredicted RBP5.98□□□□□ -1.45
VCL-206ENST00000623461 Q6ZRP5 223 aa5.98□□□□□ -1.45
VCL-206ENST00000623461 SETD2Q9BYW2 2564 aaPredicted RBP5.98□□□□□ -1.45
VCL-206ENST00000623461 MRPL34Q9BQ48 92 aaKnown RBP5.97□□□□□ -1.45
VCL-206ENST00000623461 FASNP49327 2511 aaKnown RBP5.97□□□□□ -1.45
VCL-206ENST00000623461 WDR87Q6ZQQ6 2873 aa5.97□□□□□ -1.45
VCL-206ENST00000623461 MIR22HGQ0VDD5 57 aa5.96□□□□□ -1.45
VCL-206ENST00000623461 SPTBN4Q9H254 2564 aa5.96□□□□□ -1.46
VCL-206ENST00000623461 SPINT4Q6UDR6 99 aa5.96□□□□□ -1.46
VCL-206ENST00000623461 MDFIQ99750 246 aa5.95□□□□□ -1.46
VCL-206ENST00000623461 LINC00313P59037 77 aa5.95□□□□□ -1.46
VCL-206ENST00000623461 IGLV1-50A0A075B6I6 118 aa5.95□□□□□ -1.46
VCL-206ENST00000623461 C16orf90A8MZG2 172 aa5.95□□□□□ -1.46
VCL-206ENST00000623461 EPM2AB3EWF7 344 aa5.94□□□□□ -1.46
VCL-206ENST00000623461 Q8N377 158 aa5.94□□□□□ -1.46
VCL-206ENST00000623461 OCR1Q9BZK8 76 aa5.94□□□□□ -1.46
VCL-206ENST00000623461 CHD8Q9HCK8 2581 aa5.93□□□□□ -1.46
VCL-206ENST00000623461 EP400Q96L91 3159 aa5.93□□□□□ -1.46
VCL-206ENST00000623461 IGFL1Q6UW32 110 aa5.93□□□□□ -1.46
VCL-206ENST00000623461 PLA2G2DQ9UNK4 145 aa5.92□□□□□ -1.46
VCL-206ENST00000623461 WWC2-AS2Q96NR7 200 aa5.91□□□□□ -1.46
VCL-206ENST00000623461 C8orf17Q9NRJ1 99 aa5.91□□□□□ -1.46
VCL-206ENST00000623461 ZNF575Q86XF7 245 aa5.9□□□□□ -1.46
VCL-206ENST00000623461 PRR34Q9NV39 138 aa5.9□□□□□ -1.46
VCL-206ENST00000623461 RBM12B-AS1Q9P1G2 102 aa5.9□□□□□ -1.46
VCL-206ENST00000623461 POLQO75417 2590 aa5.9□□□□□ -1.46
VCL-206ENST00000623461 PHF5AQ7RTV0 110 aaKnown RBP5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms