RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 KRTAP17-1Q9BYP8 105 aa12.57□□□□□ -0.4
PDLIM2-221ENST00000622702 LOC107984156A0A0G2JMH3 177 aa12.56□□□□□ -0.4
PDLIM2-221ENST00000622702 ARL17AQ8IVW1 177 aa12.56□□□□□ -0.4
PDLIM2-221ENST00000622702 C12orf57Q99622 126 aa12.56□□□□□ -0.4
PDLIM2-221ENST00000622702 SPANXDQ9BXN6 97 aa12.56□□□□□ -0.4
PDLIM2-221ENST00000622702 SPANXCQ9NY87 97 aa12.56□□□□□ -0.4
PDLIM2-221ENST00000622702 Q6ZVH6 145 aa12.55□□□□□ -0.4
PDLIM2-221ENST00000622702 DPH3Q96FX2 82 aa12.55□□□□□ -0.4
PDLIM2-221ENST00000622702 FAT1Q14517 4588 aa12.55□□□□□ -0.4
PDLIM2-221ENST00000622702 A0A087WYN8 130 aa12.54□□□□□ -0.4
PDLIM2-221ENST00000622702 EPM2AB3EWF7 344 aa12.54□□□□□ -0.4
PDLIM2-221ENST00000622702 SPANXB1Q9NS25 103 aaPredicted RBP12.54□□□□□ -0.4
PDLIM2-221ENST00000622702 PLAC8Q9NZF1 115 aa12.54□□□□□ -0.4
PDLIM2-221ENST00000622702 PLA2G2DQ9UNK4 145 aa12.54□□□□□ -0.4
PDLIM2-221ENST00000622702 A0A1W2PNN7 141 aa12.53□□□□□ -0.4
PDLIM2-221ENST00000622702 LINC00518Q8N0U6 118 aa12.53□□□□□ -0.4
PDLIM2-221ENST00000622702 Q8N1X5 172 aa12.53□□□□□ -0.4
PDLIM2-221ENST00000622702 HIGD1BQ9P298 99 aa12.53□□□□□ -0.4
PDLIM2-221ENST00000622702 FAM168BA1KXE4 195 aa12.53□□□□□ -0.4
PDLIM2-221ENST00000622702 SMR3BP02814 79 aaPredicted RBP12.53□□□□□ -0.4
PDLIM2-221ENST00000622702 SCXQ7RTU7 201 aa12.53□□□□□ -0.4
PDLIM2-221ENST00000622702 CIRBP-AS1Q8TBR5 109 aa12.53□□□□□ -0.4
PDLIM2-221ENST00000622702 UQCR10Q9UDW1 63 aa12.53□□□□□ -0.4
PDLIM2-221ENST00000622702 SOSTDC1Q6X4U4 206 aa12.52□□□□□ -0.41
PDLIM2-221ENST00000622702 C2orf91Q6ZV80 131 aa12.52□□□□□ -0.41
PDLIM2-221ENST00000622702 KRTAP7-1Q8IUC3 87 aa12.52□□□□□ -0.41
PDLIM2-221ENST00000622702 LINC00308Q8TCZ7 52 aa12.52□□□□□ -0.41
PDLIM2-221ENST00000622702 MIEN1Q9BRT3 115 aa12.52□□□□□ -0.41
PDLIM2-221ENST00000622702 SERTAD4-AS1Q5TG53 156 aa12.51□□□□□ -0.41
PDLIM2-221ENST00000622702 EIF4EBP3O60516 100 aaPredicted RBP12.5□□□□□ -0.41
PDLIM2-221ENST00000622702 IFITM1P13164 125 aa12.5□□□□□ -0.41
PDLIM2-221ENST00000622702 PPDPFQ9H3Y8 114 aa12.5□□□□□ -0.41
PDLIM2-221ENST00000622702 COPS9Q8WXC6 57 aa12.49□□□□□ -0.41
PDLIM2-221ENST00000622702 IGLV5-37A0A075B6J1 123 aa12.48□□□□□ -0.41
PDLIM2-221ENST00000622702 VPREB1P12018 145 aa12.48□□□□□ -0.41
PDLIM2-221ENST00000622702 NPC2P61916 151 aa12.48□□□□□ -0.41
PDLIM2-221ENST00000622702 RPL24P83731 157 aaKnown RBP12.48□□□□□ -0.41
PDLIM2-221ENST00000622702 SRSF9Q13242 221 aaKnown RBP eCLIP12.48□□□□□ -0.41
PDLIM2-221ENST00000622702 FAM19A5Q7Z5A7 132 aaPredicted RBP12.48□□□□□ -0.41
PDLIM2-221ENST00000622702 Q8NDZ9 215 aa12.48□□□□□ -0.41
PDLIM2-221ENST00000622702 KRTAP4-5Q9BYR2 181 aa12.48□□□□□ -0.41
PDLIM2-221ENST00000622702 PRO1933Q9H354 126 aa12.48□□□□□ -0.41
PDLIM2-221ENST00000622702 NDUFC2O95298 119 aa12.46□□□□□ -0.42
PDLIM2-221ENST00000622702 MUSTN1Q8IVN3 82 aa12.46□□□□□ -0.42
PDLIM2-221ENST00000622702 M0QXV9 152 aa12.45□□□□□ -0.42
PDLIM2-221ENST00000622702 HIST1H4GQ99525 98 aa12.45□□□□□ -0.42
PDLIM2-221ENST00000622702 C22orf24Q9Y442 160 aa12.45□□□□□ -0.42
PDLIM2-221ENST00000622702 NKAPP1Q8N9T2 125 aa12.43□□□□□ -0.42
PDLIM2-221ENST00000622702 ABCA13Q86UQ4 5058 aa12.43□□□□□ -0.42
PDLIM2-221ENST00000622702 TSTD3H0UI37 97 aa12.42□□□□□ -0.42
PDLIM2-221ENST00000622702 FAM229AH3BQW9 127 aa12.42□□□□□ -0.42
PDLIM2-221ENST00000622702 TAL2Q16559 108 aa12.42□□□□□ -0.42
PDLIM2-221ENST00000622702 Q5VSD8 79 aa12.42□□□□□ -0.42
PDLIM2-221ENST00000622702 MRPL55Q7Z7F7 128 aaKnown RBP12.41□□□□□ -0.42
PDLIM2-221ENST00000622702 HNRNPA3P51991 378 aaKnown RBP12.4□□□□□ -0.42
PDLIM2-221ENST00000622702 PRR3P79522 188 aaKnown RBP12.4□□□□□ -0.42
PDLIM2-221ENST00000622702 LBHQ53QV2 105 aaPredicted RBP12.4□□□□□ -0.42
PDLIM2-221ENST00000622702 PHF5AQ7RTV0 110 aaKnown RBP12.4□□□□□ -0.42
PDLIM2-221ENST00000622702 LINC00528Q8N1L1 170 aa12.4□□□□□ -0.42
PDLIM2-221ENST00000622702 TRBV10-2A0A0K0K1G8 114 aa12.4□□□□□ -0.43
PDLIM2-221ENST00000622702 VPS13BQ7Z7G8 4022 aa12.39□□□□□ -0.43
PDLIM2-221ENST00000622702 PCLOQ9Y6V0 5065 aa12.39□□□□□ -0.43
PDLIM2-221ENST00000622702 M0R378 163 aa12.39□□□□□ -0.43
PDLIM2-221ENST00000622702 C7orf33Q8WU49 177 aa12.39□□□□□ -0.43
PDLIM2-221ENST00000622702 SRRM2Q9UQ35 2752 aaKnown RBP12.38□□□□□ -0.43
PDLIM2-221ENST00000622702 NCR3O14931 201 aa12.38□□□□□ -0.43
PDLIM2-221ENST00000622702 HSD52Q0P140 79 aa12.38□□□□□ -0.43
PDLIM2-221ENST00000622702 LINC00167Q96N53 147 aa12.38□□□□□ -0.43
PDLIM2-221ENST00000622702 IGKV2-28A0A075B6P5 120 aa12.36□□□□□ -0.43
PDLIM2-221ENST00000622702 A4D1N5 150 aa12.36□□□□□ -0.43
PDLIM2-221ENST00000622702 IGKV2D-28P01615 120 aa12.36□□□□□ -0.43
PDLIM2-221ENST00000622702 CEND1Q8N111 149 aa12.36□□□□□ -0.43
PDLIM2-221ENST00000622702 GAGE10A6NGK3 116 aa12.35□□□□□ -0.43
PDLIM2-221ENST00000622702 IGLV1-50A0A075B6I6 118 aa12.33□□□□□ -0.44
PDLIM2-221ENST00000622702 UBE2BP63146 152 aa12.33□□□□□ -0.44
PDLIM2-221ENST00000622702 PLA2G1BP04054 148 aaKnown RBP12.32□□□□□ -0.44
PDLIM2-221ENST00000622702 KRTAP11-1Q8IUC1 163 aa12.32□□□□□ -0.44
PDLIM2-221ENST00000622702 LINC00337Q8N6G1 96 aa12.32□□□□□ -0.44
PDLIM2-221ENST00000622702 RPL37AP8A6NKH3 93 aa12.31□□□□□ -0.44
PDLIM2-221ENST00000622702 IGLV6-57P01721 117 aa12.31□□□□□ -0.44
PDLIM2-221ENST00000622702 TRBV10-3A0A0K0K1G6 114 aa12.3□□□□□ -0.44
PDLIM2-221ENST00000622702 DDTP30046 118 aa12.3□□□□□ -0.44
PDLIM2-221ENST00000622702 FXYD2P54710 66 aa12.3□□□□□ -0.44
PDLIM2-221ENST00000622702 TMEM238LA0A1B0GVL6 79 aa12.29□□□□□ -0.44
PDLIM2-221ENST00000622702 A6NJY4 79 aa12.29□□□□□ -0.44
PDLIM2-221ENST00000622702 CTAG1AP78358 180 aa12.29□□□□□ -0.44
PDLIM2-221ENST00000622702 S100A7L2Q5SY68 101 aa12.29□□□□□ -0.44
PDLIM2-221ENST00000622702 TMEM126AQ9H061 195 aa12.28□□□□□ -0.44
PDLIM2-221ENST00000622702 TRAV13-2A0A0B4J235 113 aa12.27□□□□□ -0.44
PDLIM2-221ENST00000622702 PSORS1C2Q9UIG4 136 aa12.27□□□□□ -0.44
PDLIM2-221ENST00000622702 INAFM2P0DMQ5 153 aa12.27□□□□□ -0.45
PDLIM2-221ENST00000622702 OR13C6PQ8NH95 151 aa12.27□□□□□ -0.45
PDLIM2-221ENST00000622702 KCNQ1DNQ9H478 68 aa12.27□□□□□ -0.45
PDLIM2-221ENST00000622702 CFC1BP0CG36 223 aa12.26□□□□□ -0.45
PDLIM2-221ENST00000622702 CFC1P0CG37 223 aa12.26□□□□□ -0.45
PDLIM2-221ENST00000622702 RPL37AP61513 92 aaKnown RBP12.26□□□□□ -0.45
PDLIM2-221ENST00000622702 A0A0B4J2C4 111 aa12.25□□□□□ -0.45
PDLIM2-221ENST00000622702 A6NDN8 102 aa12.25□□□□□ -0.45
PDLIM2-221ENST00000622702 PRYO14603 147 aa12.24□□□□□ -0.45
PDLIM2-221ENST00000622702 KRTAP10-4P60372 401 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms