RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 VPREB1P12018 145 aa5.72□□□□□ -1.49
TARDBP-218ENST00000617172 ZNF625Q96I27 306 aaPredicted RBP5.72□□□□□ -1.49
TARDBP-218ENST00000617172 A0A087X002 238 aa5.71□□□□□ -1.5
TARDBP-218ENST00000617172 FAM229BQ4G0N7 80 aa5.71□□□□□ -1.5
TARDBP-218ENST00000617172 IFI27L1Q96BM0 104 aa5.71□□□□□ -1.5
TARDBP-218ENST00000617172 TMEM126AQ9H061 195 aa5.71□□□□□ -1.5
TARDBP-218ENST00000617172 TMEM223A0PJW6 202 aa5.7□□□□□ -1.5
TARDBP-218ENST00000617172 LINC00587B1AMM8 73 aa5.7□□□□□ -1.5
TARDBP-218ENST00000617172 ATP6V1G1O75348 118 aa5.7□□□□□ -1.5
TARDBP-218ENST00000617172 LINC00158P58513 81 aa5.7□□□□□ -1.5
TARDBP-218ENST00000617172 CTAG1AP78358 180 aa5.7□□□□□ -1.5
TARDBP-218ENST00000617172 FAM19A1Q7Z5A9 133 aa5.7□□□□□ -1.5
TARDBP-218ENST00000617172 IGKV2D-26A0A0A0MRZ7 120 aa5.69□□□□□ -1.5
TARDBP-218ENST00000617172 TMEM238LA0A1B0GVL6 79 aa5.69□□□□□ -1.5
TARDBP-218ENST00000617172 SCO1O75880 301 aa5.69□□□□□ -1.5
TARDBP-218ENST00000617172 TSPAN13O95857 204 aa5.69□□□□□ -1.5
TARDBP-218ENST00000617172 YPEL4Q96NS1 127 aa5.69□□□□□ -1.5
TARDBP-218ENST00000617172 M0R378 163 aa5.68□□□□□ -1.5
TARDBP-218ENST00000617172 HSBP1O75506 76 aa5.68□□□□□ -1.5
TARDBP-218ENST00000617172 HERV-K104P63124 156 aa5.68□□□□□ -1.5
TARDBP-218ENST00000617172 ANAPC11Q9NYG5 84 aa5.68□□□□□ -1.5
TARDBP-218ENST00000617172 TMEM238C9JI98 176 aa5.67□□□□□ -1.5
TARDBP-218ENST00000617172 PRLHP81277 87 aa5.67□□□□□ -1.5
TARDBP-218ENST00000617172 CBLN2Q8IUK8 224 aa5.67□□□□□ -1.5
TARDBP-218ENST00000617172 RNF213Q63HN8 5207 aa5.67□□□□□ -1.5
TARDBP-218ENST00000617172 KRTAP13-2Q52LG2 175 aa5.66□□□□□ -1.5
TARDBP-218ENST00000617172 LINC00304Q8N9R0 145 aa5.66□□□□□ -1.5
TARDBP-218ENST00000617172 PLEKHB2Q96CS7 222 aa5.66□□□□□ -1.5
TARDBP-218ENST00000617172 MAP1LC3CQ9BXW4 147 aa5.66□□□□□ -1.5
TARDBP-218ENST00000617172 A0A0U1RRA0 63 aa5.65□□□□□ -1.5
TARDBP-218ENST00000617172 MYMXA0A1B0GTQ4 84 aa5.65□□□□□ -1.5
TARDBP-218ENST00000617172 SMIM13P0DJ93 91 aa5.65□□□□□ -1.5
TARDBP-218ENST00000617172 MEIG1Q5JSS6 88 aa5.65□□□□□ -1.5
TARDBP-218ENST00000617172 BOD1L2Q8IYS8 172 aa5.65□□□□□ -1.5
TARDBP-218ENST00000617172 FAM19A2Q8N3H0 131 aa5.65□□□□□ -1.5
TARDBP-218ENST00000617172 Q8NDZ9 215 aa5.65□□□□□ -1.5
TARDBP-218ENST00000617172 NDUFA12Q9UI09 145 aa5.65□□□□□ -1.5
TARDBP-218ENST00000617172 LEPROTL1O95214 131 aa5.64□□□□□ -1.51
TARDBP-218ENST00000617172 TRGC2P03986 189 aa5.64□□□□□ -1.51
TARDBP-218ENST00000617172 PLNP26678 52 aa5.64□□□□□ -1.51
TARDBP-218ENST00000617172 S100A12P80511 92 aa5.64□□□□□ -1.51
TARDBP-218ENST00000617172 HIGD2AQ9BW72 106 aa5.64□□□□□ -1.51
TARDBP-218ENST00000617172 ZNF706Q9Y5V0 76 aaPredicted RBP5.64□□□□□ -1.51
TARDBP-218ENST00000617172 LPAP08519 4548 aa5.64□□□□□ -1.51
TARDBP-218ENST00000617172 PRYO14603 147 aa5.63□□□□□ -1.51
TARDBP-218ENST00000617172 SPAG11AQ6PDA7 123 aa5.63□□□□□ -1.51
TARDBP-218ENST00000617172 MIR7-3HGQ8N6C7 128 aa5.63□□□□□ -1.51
TARDBP-218ENST00000617172 LINC00337Q8N6G1 96 aa5.63□□□□□ -1.51
TARDBP-218ENST00000617172 KCNQ1DNQ9H478 68 aa5.63□□□□□ -1.51
TARDBP-218ENST00000617172 HSPB8Q9UJY1 196 aa5.63□□□□□ -1.51
TARDBP-218ENST00000617172 H0Y8G0 127 aa5.62□□□□□ -1.51
TARDBP-218ENST00000617172 LEPROTO15243 131 aa5.62□□□□□ -1.51
TARDBP-218ENST00000617172 LOC107984156A0A0G2JMH3 177 aa5.61□□□□□ -1.51
TARDBP-218ENST00000617172 A0A0U1RQV1 116 aa5.61□□□□□ -1.51
TARDBP-218ENST00000617172 SERF1AO75920 110 aa5.61□□□□□ -1.51
TARDBP-218ENST00000617172 HERVK_113P61574 105 aa5.61□□□□□ -1.51
TARDBP-218ENST00000617172 ARL17AQ8IVW1 177 aa5.61□□□□□ -1.51
TARDBP-218ENST00000617172 SPRR4Q96PI1 79 aa5.61□□□□□ -1.51
TARDBP-218ENST00000617172 ETDCA0A1B0GVM5 59 aa5.6□□□□□ -1.51
TARDBP-218ENST00000617172 NCR3O14931 201 aa5.6□□□□□ -1.51
TARDBP-218ENST00000617172 DPM2O94777 84 aa5.6□□□□□ -1.51
TARDBP-218ENST00000617172 SPRR1AP35321 89 aa5.6□□□□□ -1.51
TARDBP-218ENST00000617172 NMUP48645 174 aa5.6□□□□□ -1.51
TARDBP-218ENST00000617172 TRBV10-2A0A0K0K1G8 114 aa5.59□□□□□ -1.51
TARDBP-218ENST00000617172 J3QQQ9 107 aa5.59□□□□□ -1.51
TARDBP-218ENST00000617172 TPRXLQ17RH7 258 aa5.59□□□□□ -1.51
TARDBP-218ENST00000617172 IGLV7-46A0A075B6I9 117 aa5.58□□□□□ -1.52
TARDBP-218ENST00000617172 TRBV10-3A0A0K0K1G6 114 aa5.58□□□□□ -1.52
TARDBP-218ENST00000617172 KRTAP4-16G5E9R7 235 aaPredicted RBP5.58□□□□□ -1.52
TARDBP-218ENST00000617172 IGKCP01834 107 aa5.58□□□□□ -1.52
TARDBP-218ENST00000617172 FABP4P15090 132 aa5.58□□□□□ -1.52
TARDBP-218ENST00000617172 LGALS3P17931 250 aaKnown RBP5.58□□□□□ -1.52
TARDBP-218ENST00000617172 LINC00310P59036 64 aa5.58□□□□□ -1.52
TARDBP-218ENST00000617172 C3orf22Q8N5N4 141 aa5.58□□□□□ -1.52
TARDBP-218ENST00000617172 SMCR5Q8TEV8 140 aa5.58□□□□□ -1.52
TARDBP-218ENST00000617172 RETNLBQ9BQ08 111 aa5.58□□□□□ -1.52
TARDBP-218ENST00000617172 MIEN1Q9BRT3 115 aa5.58□□□□□ -1.52
TARDBP-218ENST00000617172 EIF4EBP3O60516 100 aaPredicted RBP5.57□□□□□ -1.52
TARDBP-218ENST00000617172 DDTP30046 118 aa5.57□□□□□ -1.52
TARDBP-218ENST00000617172 TSPEAR-AS2P59090 65 aa5.57□□□□□ -1.52
TARDBP-218ENST00000617172 CDIP1Q9H305 208 aa5.57□□□□□ -1.52
TARDBP-218ENST00000617172 COLCA2A8K830 154 aa5.56□□□□□ -1.52
TARDBP-218ENST00000617172 NDUFC2O95298 119 aa5.56□□□□□ -1.52
TARDBP-218ENST00000617172 DAND5Q8N907 189 aa5.56□□□□□ -1.52
TARDBP-218ENST00000617172 SPANXB1Q9NS25 103 aaPredicted RBP5.56□□□□□ -1.52
TARDBP-218ENST00000617172 B5MCH6 92 aa5.55□□□□□ -1.52
TARDBP-218ENST00000617172 SPINK1P00995 79 aa5.55□□□□□ -1.52
TARDBP-218ENST00000617172 JOSD1Q15040 202 aaPredicted RBP5.55□□□□□ -1.52
TARDBP-218ENST00000617172 LINC00483Q53H64 154 aa5.55□□□□□ -1.52
TARDBP-218ENST00000617172 S100A7L2Q5SY68 101 aa5.55□□□□□ -1.52
TARDBP-218ENST00000617172 FP248Q71RG6 208 aaPredicted RBP5.55□□□□□ -1.52
TARDBP-218ENST00000617172 SLC7A5P1Q8MH63 180 aa5.55□□□□□ -1.52
TARDBP-218ENST00000617172 CBY1Q9Y3M2 126 aa5.55□□□□□ -1.52
TARDBP-218ENST00000617172 Q8NBF4 154 aa5.54□□□□□ -1.52
TARDBP-218ENST00000617172 PMCHL2Q9BQD1 86 aa5.54□□□□□ -1.52
TARDBP-218ENST00000617172 PPDPFQ9H3Y8 114 aa5.54□□□□□ -1.52
TARDBP-218ENST00000617172 E9PLD3 99 aa5.53□□□□□ -1.52
TARDBP-218ENST00000617172 IGLV6-57P01721 117 aa5.53□□□□□ -1.52
TARDBP-218ENST00000617172 GAGE2AQ6NT46 116 aa5.53□□□□□ -1.52
TARDBP-218ENST00000617172 Q6ZRX8 168 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms