RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 C4orf3Q8WVX3 66 aa9.12□□□□□ -0.95
MSH6-214ENST00000616033 UNC79Q9P2D8 2635 aa9.12□□□□□ -0.95
MSH6-214ENST00000616033 ANGP03950 147 aaKnown RBP9.12□□□□□ -0.95
MSH6-214ENST00000616033 IGHV4-31P0DP07 118 aa9.12□□□□□ -0.95
MSH6-214ENST00000616033 HTN3P15516 51 aa9.12□□□□□ -0.95
MSH6-214ENST00000616033 H7BZZ5 65 aa9.12□□□□□ -0.95
MSH6-214ENST00000616033 TMEM256-PLSCR3K7ERE1 68 aa9.12□□□□□ -0.95
MSH6-214ENST00000616033 PRR4Q16378 134 aa9.11□□□□□ -0.95
MSH6-214ENST00000616033 A0A096LNT2 108 aa9.11□□□□□ -0.95
MSH6-214ENST00000616033 FAM229BQ4G0N7 80 aa9.11□□□□□ -0.95
MSH6-214ENST00000616033 SMIM26A0A096LP01 95 aa9.11□□□□□ -0.95
MSH6-214ENST00000616033 JMJD7-PLA2G4BH0Y9G9 81 aa9.11□□□□□ -0.95
MSH6-214ENST00000616033 C6orf223Q8N319 242 aa9.11□□□□□ -0.95
MSH6-214ENST00000616033 DSCR9P59020 149 aa9.09□□□□□ -0.95
MSH6-214ENST00000616033 FAM19A3Q7Z5A8 133 aa9.09□□□□□ -0.95
MSH6-214ENST00000616033 NANOS2P60321 138 aaKnown RBP9.09□□□□□ -0.95
MSH6-214ENST00000616033 Q6ZQY7 126 aa9.09□□□□□ -0.95
MSH6-214ENST00000616033 XAGE1AQ9HD64 81 aa9.09□□□□□ -0.95
MSH6-214ENST00000616033 C16orf74Q96GX8 76 aa9.08□□□□□ -0.96
MSH6-214ENST00000616033 OBSCN-AS1Q96MR7 158 aa9.08□□□□□ -0.96
MSH6-214ENST00000616033 NDUFC2-KCTD14E9PQ53 114 aa9.08□□□□□ -0.96
MSH6-214ENST00000616033 GIG44P09565 113 aaPredicted RBP9.08□□□□□ -0.96
MSH6-214ENST00000616033 Q8N9L7 120 aa9.08□□□□□ -0.96
MSH6-214ENST00000616033 Q8NDZ9 215 aa9.08□□□□□ -0.96
MSH6-214ENST00000616033 PSPHP1O15172 72 aa9.07□□□□□ -0.96
MSH6-214ENST00000616033 TM2D3Q9BRN9 247 aa9.07□□□□□ -0.96
MSH6-214ENST00000616033 PLAC8L1A1L4L8 177 aa9.06□□□□□ -0.96
MSH6-214ENST00000616033 UNQ6190/PRO20217Q6UXQ8 127 aa9.06□□□□□ -0.96
MSH6-214ENST00000616033 SMR3AQ99954 134 aa9.06□□□□□ -0.96
MSH6-214ENST00000616033 C10orf25Q5T742 122 aa9.05□□□□□ -0.96
MSH6-214ENST00000616033 LINC01006Q8NI28 216 aa9.05□□□□□ -0.96
MSH6-214ENST00000616033 CHCHD10Q8WYQ3 142 aaPredicted RBP9.05□□□□□ -0.96
MSH6-214ENST00000616033 LINC01547P58512 204 aaPredicted RBP9.05□□□□□ -0.96
MSH6-214ENST00000616033 VWFP04275 2813 aa9.04□□□□□ -0.96
MSH6-214ENST00000616033 C16orf95Q9H693 158 aa9.04□□□□□ -0.96
MSH6-214ENST00000616033 Q6ZVQ6 151 aa9.03□□□□□ -0.96
MSH6-214ENST00000616033 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.02□□□□□ -0.97
MSH6-214ENST00000616033 Q8IZM0 81 aa9.01□□□□□ -0.97
MSH6-214ENST00000616033 LY6G6DO95868 133 aa9.01□□□□□ -0.97
MSH6-214ENST00000616033 REG3AQ06141 175 aa9□□□□□ -0.97
MSH6-214ENST00000616033 DNAJC9-AS1A6NH13 148 aa9□□□□□ -0.97
MSH6-214ENST00000616033 LINC00575Q6W349 94 aa9□□□□□ -0.97
MSH6-214ENST00000616033 Q6ZQT0 140 aa9□□□□□ -0.97
MSH6-214ENST00000616033 J3QKU1 62 aa8.99□□□□□ -0.97
MSH6-214ENST00000616033 SPAG11BQ08648 103 aa8.99□□□□□ -0.97
MSH6-214ENST00000616033 IGHV4-28A0A0C4DH34 117 aa8.99□□□□□ -0.97
MSH6-214ENST00000616033 KLK12Q9UKR0 248 aa8.99□□□□□ -0.97
MSH6-214ENST00000616033 TRAV7A0A075B6U4 112 aa8.98□□□□□ -0.97
MSH6-214ENST00000616033 DEFB105AQ8NG35 78 aa8.98□□□□□ -0.97
MSH6-214ENST00000616033 ATP5EP2Q5VTU8 51 aa8.98□□□□□ -0.97
MSH6-214ENST00000616033 TEP1Q99973 2627 aaKnown RBP8.98□□□□□ -0.97
MSH6-214ENST00000616033 MIFP14174 115 aa8.98□□□□□ -0.97
MSH6-214ENST00000616033 PMAIP1Q13794 54 aa8.98□□□□□ -0.97
MSH6-214ENST00000616033 ATRQ13535 2644 aa8.97□□□□□ -0.97
MSH6-214ENST00000616033 TRBV10-3A0A0K0K1G6 114 aa8.97□□□□□ -0.97
MSH6-214ENST00000616033 CELA1Q9UNI1 258 aa8.97□□□□□ -0.97
MSH6-214ENST00000616033 KRTAP1-3Q8IUG1 177 aa8.97□□□□□ -0.97
MSH6-214ENST00000616033 CYSRT1A8MQ03 144 aa8.96□□□□□ -0.97
MSH6-214ENST00000616033 C3orf84H3BNL1 204 aa8.96□□□□□ -0.97
MSH6-214ENST00000616033 ZNF561-AS1K7EIQ3 104 aa8.96□□□□□ -0.97
MSH6-214ENST00000616033 DEFB135Q30KP9 77 aa8.96□□□□□ -0.97
MSH6-214ENST00000616033 HIGD2BQ4VC39 106 aa8.96□□□□□ -0.97
MSH6-214ENST00000616033 PDZD2O15018 2839 aa8.96□□□□□ -0.97
MSH6-214ENST00000616033 HIVEP1P15822 2718 aa8.96□□□□□ -0.98
MSH6-214ENST00000616033 KIAA0087Q14695 138 aa8.96□□□□□ -0.98
MSH6-214ENST00000616033 SPTSSBQ8NFR3 76 aa8.95□□□□□ -0.98
MSH6-214ENST00000616033 CD164L2Q6UWJ8 174 aa8.95□□□□□ -0.98
MSH6-214ENST00000616033 A8MU10 97 aa8.94□□□□□ -0.98
MSH6-214ENST00000616033 PRO0255Q9UI72 69 aa8.94□□□□□ -0.98
MSH6-214ENST00000616033 CSNK1G2-AS1Q8NCQ2 148 aa8.94□□□□□ -0.98
MSH6-214ENST00000616033 BAHCC1Q9P281 2608 aa8.94□□□□□ -0.98
MSH6-214ENST00000616033 OTOGQ6ZRI0 2925 aa8.93□□□□□ -0.98
MSH6-214ENST00000616033 MUC7Q8TAX7 377 aa8.93□□□□□ -0.98
MSH6-214ENST00000616033 PKD1L1Q8TDX9 2849 aa8.93□□□□□ -0.98
MSH6-214ENST00000616033 BPY2O14599 106 aa8.93□□□□□ -0.98
MSH6-214ENST00000616033 HIGD2AQ9BW72 106 aa8.92□□□□□ -0.98
MSH6-214ENST00000616033 FUSP35637 526 aaKnown RBP eCLIP8.92□□□□□ -0.98
MSH6-214ENST00000616033 NREPQ16612 68 aa8.91□□□□□ -0.98
MSH6-214ENST00000616033 TMEM254Q8TBM7 123 aa8.91□□□□□ -0.98
MSH6-214ENST00000616033 LINC00167Q96N53 147 aa8.91□□□□□ -0.98
MSH6-214ENST00000616033 DIRC1Q969H9 104 aa8.91□□□□□ -0.98
MSH6-214ENST00000616033 FSHBP01225 129 aa8.9□□□□□ -0.98
MSH6-214ENST00000616033 C19orf73Q9NVV2 129 aa8.9□□□□□ -0.99
MSH6-214ENST00000616033 A0A1B0GUV1 79 aa8.89□□□□□ -0.99
MSH6-214ENST00000616033 IGLV1-51P01701 117 aa8.89□□□□□ -0.99
MSH6-214ENST00000616033 COX7BP24311 80 aa8.87□□□□□ -0.99
MSH6-214ENST00000616033 FAM30AQ9NZY2 134 aa8.87□□□□□ -0.99
MSH6-214ENST00000616033 ZNF73O43830 326 aaPredicted RBP8.87□□□□□ -0.99
MSH6-214ENST00000616033 COX17Q14061 63 aa8.87□□□□□ -0.99
MSH6-214ENST00000616033 ESRGQ1W209 222 aa8.87□□□□□ -0.99
MSH6-214ENST00000616033 KMT2BQ9UMN6 2715 aaPredicted RBP8.86□□□□□ -0.99
MSH6-214ENST00000616033 KLKP1Q107X0 134 aa8.86□□□□□ -0.99
MSH6-214ENST00000616033 CAMK2N2Q96S95 79 aa8.84□□□□□ -0.99
MSH6-214ENST00000616033 TENM1Q9UKZ4 2725 aa8.84□□□□□ -0.99
MSH6-214ENST00000616033 LOC110117498A0A087WWA1 95 aa8.84□□□□□ -0.99
MSH6-214ENST00000616033 C6orf48Q9UBA6 75 aa8.83□□□□□ -1
MSH6-214ENST00000616033 CMC4P56277 68 aaPredicted RBP8.83□□□□□ -1
MSH6-214ENST00000616033 X6R8D5 127 aa8.83□□□□□ -1
MSH6-214ENST00000616033 KRTAP1-1Q07627 177 aa8.82□□□□□ -1
MSH6-214ENST00000616033 MRPL55Q7Z7F7 128 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms