RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 SMIM1B2RUZ4 78 aa3.51□□□□□ -1.85
MUC1-227ENST00000615517 ARPC5O15511 151 aa3.51□□□□□ -1.85
MUC1-227ENST00000615517 NPYP01303 97 aa3.51□□□□□ -1.85
MUC1-227ENST00000615517 FAM104BQ5XKR9 115 aa3.51□□□□□ -1.85
MUC1-227ENST00000615517 C2orf66Q6UXQ4 117 aa3.51□□□□□ -1.85
MUC1-227ENST00000615517 COX7B2Q8TF08 81 aa3.51□□□□□ -1.85
MUC1-227ENST00000615517 C2orf88Q9BSF0 95 aa3.51□□□□□ -1.85
MUC1-227ENST00000615517 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
MUC1-227ENST00000615517 KRTAP23-1A1A580 65 aa3.5□□□□□ -1.85
MUC1-227ENST00000615517 LINC00862A6NCI5 91 aa3.5□□□□□ -1.85
MUC1-227ENST00000615517 ERC2-IT1O76042 136 aa3.5□□□□□ -1.85
MUC1-227ENST00000615517 CKS2P33552 79 aa3.5□□□□□ -1.85
MUC1-227ENST00000615517 RAB14P61106 215 aa3.5□□□□□ -1.85
MUC1-227ENST00000615517 AKAP14Q86UN6 197 aa3.5□□□□□ -1.85
MUC1-227ENST00000615517 TIMM17AQ99595 171 aa3.5□□□□□ -1.85
MUC1-227ENST00000615517 SND1-IT1Q9HBX3 110 aa3.5□□□□□ -1.85
MUC1-227ENST00000615517 PFN2P35080 140 aa3.49□□□□□ -1.85
MUC1-227ENST00000615517 HERVK_113P63121 156 aa3.49□□□□□ -1.85
MUC1-227ENST00000615517 RIGQ13278 110 aa3.49□□□□□ -1.85
MUC1-227ENST00000615517 S100ZQ8WXG8 99 aa3.49□□□□□ -1.85
MUC1-227ENST00000615517 VCX2Q9H322 139 aa3.49□□□□□ -1.85
MUC1-227ENST00000615517 CHTOPQ9Y3Y2 248 aaKnown RBP3.49□□□□□ -1.85
MUC1-227ENST00000615517 KMT2DO14686 5537 aa3.49□□□□□ -1.85
MUC1-227ENST00000615517 MDN1Q9NU22 5596 aa3.49□□□□□ -1.85
MUC1-227ENST00000615517 D6R8Y8 96 aa3.48□□□□□ -1.85
MUC1-227ENST00000615517 SPRR1AP35321 89 aa3.48□□□□□ -1.85
MUC1-227ENST00000615517 RPL24P83731 157 aaKnown RBP3.48□□□□□ -1.85
MUC1-227ENST00000615517 PDZD11Q5EBL8 140 aa3.48□□□□□ -1.85
MUC1-227ENST00000615517 KIAA1644Q3SXP7 199 aa3.47□□□□□ -1.85
MUC1-227ENST00000615517 C9orf153Q5TBE3 101 aa3.47□□□□□ -1.85
MUC1-227ENST00000615517 HRCT1Q6UXD1 115 aa3.47□□□□□ -1.85
MUC1-227ENST00000615517 LINC00299Q6ZSB3 139 aa3.47□□□□□ -1.85
MUC1-227ENST00000615517 IGIPA6NJ69 53 aa3.46□□□□□ -1.86
MUC1-227ENST00000615517 SMLR1H3BR10 107 aa3.46□□□□□ -1.86
MUC1-227ENST00000615517 RAB5AP20339 215 aa3.46□□□□□ -1.86
MUC1-227ENST00000615517 LOC389332A0A1B0GUA5 103 aa3.45□□□□□ -1.86
MUC1-227ENST00000615517 C20orf202A1L168 122 aa3.45□□□□□ -1.86
MUC1-227ENST00000615517 SPINK8P0C7L1 97 aa3.45□□□□□ -1.86
MUC1-227ENST00000615517 SEC11AP67812 179 aa3.45□□□□□ -1.86
MUC1-227ENST00000615517 LIMD2Q9BT23 127 aa3.45□□□□□ -1.86
MUC1-227ENST00000615517 OSTCQ9NRP0 149 aa3.45□□□□□ -1.86
MUC1-227ENST00000615517 V9GYV3 84 aa3.45□□□□□ -1.86
MUC1-227ENST00000615517 IGLV5-45A0A087WSX0 123 aa3.44□□□□□ -1.86
MUC1-227ENST00000615517 ETDCA0A1B0GVM5 59 aa3.44□□□□□ -1.86
MUC1-227ENST00000615517 C5orf52A6NGY3 159 aa3.44□□□□□ -1.86
MUC1-227ENST00000615517 ATP5LO75964 103 aa3.44□□□□□ -1.86
MUC1-227ENST00000615517 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
MUC1-227ENST00000615517 ZNF345Q14585 488 aa3.44□□□□□ -1.86
MUC1-227ENST00000615517 Q9BRP9 147 aa3.44□□□□□ -1.86
MUC1-227ENST00000615517 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
MUC1-227ENST00000615517 KCNQ1DNQ9H478 68 aa3.44□□□□□ -1.86
MUC1-227ENST00000615517 ERG28Q9UKR5 140 aa3.44□□□□□ -1.86
MUC1-227ENST00000615517 CYSLTR1Q9Y271 337 aa3.44□□□□□ -1.86
MUC1-227ENST00000615517 TEX46H3BTG2 121 aa3.43□□□□□ -1.86
MUC1-227ENST00000615517 LGALS3P17931 250 aaKnown RBP3.43□□□□□ -1.86
MUC1-227ENST00000615517 BLOC1S1P78537 153 aa3.43□□□□□ -1.86
MUC1-227ENST00000615517 FAM74A3Q4VXF1 159 aa3.43□□□□□ -1.86
MUC1-227ENST00000615517 NAT8BQ9UHF3 227 aa3.43□□□□□ -1.86
MUC1-227ENST00000615517 TINCRA0A1B0GVN0 87 aa3.42□□□□□ -1.86
MUC1-227ENST00000615517 C1orf195Q5TG92 126 aa3.42□□□□□ -1.86
MUC1-227ENST00000615517 ZNF625Q96I27 306 aaPredicted RBP3.42□□□□□ -1.86
MUC1-227ENST00000615517 BATF3Q9NR55 127 aa3.42□□□□□ -1.86
MUC1-227ENST00000615517 KANTRA0A1W2PQU2 76 aa3.41□□□□□ -1.86
MUC1-227ENST00000615517 TMEM250H0YL14 139 aa3.41□□□□□ -1.86
MUC1-227ENST00000615517 PPBPP02775 128 aa3.41□□□□□ -1.86
MUC1-227ENST00000615517 COX17Q14061 63 aa3.41□□□□□ -1.86
MUC1-227ENST00000615517 TMEM136Q6ZRR5 245 aa3.41□□□□□ -1.86
MUC1-227ENST00000615517 PRELID3AQ96N28 172 aa3.41□□□□□ -1.86
MUC1-227ENST00000615517 TRBV10-3A0A0K0K1G6 114 aa3.4□□□□□ -1.87
MUC1-227ENST00000615517 A0A1B0GXF2 115 aa3.4□□□□□ -1.87
MUC1-227ENST00000615517 SMIM27A0A1W2PRY6 76 aa3.4□□□□□ -1.87
MUC1-227ENST00000615517 NCR3O14931 201 aa3.4□□□□□ -1.87
MUC1-227ENST00000615517 TAGLN2P37802 199 aaKnown RBP3.4□□□□□ -1.87
MUC1-227ENST00000615517 CEBPGP53567 150 aa3.4□□□□□ -1.87
MUC1-227ENST00000615517 MRPL54Q6P161 138 aaKnown RBP3.4□□□□□ -1.87
MUC1-227ENST00000615517 ORMDL3Q8N138 153 aa3.4□□□□□ -1.87
MUC1-227ENST00000615517 Q8N8P6 123 aa3.4□□□□□ -1.87
MUC1-227ENST00000615517 ST20-AS1Q8NBB2 130 aa3.4□□□□□ -1.87
MUC1-227ENST00000615517 TRAV9-1A0A075B6T8 112 aa3.39□□□□□ -1.87
MUC1-227ENST00000615517 IGLV5-39A0A0G2JS06 123 aa3.39□□□□□ -1.87
MUC1-227ENST00000615517 A0A1B0GW15 77 aa3.39□□□□□ -1.87
MUC1-227ENST00000615517 HMSDA8MTL9 139 aa3.39□□□□□ -1.87
MUC1-227ENST00000615517 H7C2G1 150 aa3.39□□□□□ -1.87
MUC1-227ENST00000615517 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
MUC1-227ENST00000615517 NDUFA13Q9P0J0 144 aa3.39□□□□□ -1.87
MUC1-227ENST00000615517 F8W036 122 aa3.38□□□□□ -1.87
MUC1-227ENST00000615517 ADCYAP1P18509 176 aa3.38□□□□□ -1.87
MUC1-227ENST00000615517 SNRPEP62304 92 aaKnown RBP3.38□□□□□ -1.87
MUC1-227ENST00000615517 ORMDL2Q53FV1 153 aa3.38□□□□□ -1.87
MUC1-227ENST00000615517 PAPPA-AS1Q5QFB9 102 aa3.38□□□□□ -1.87
MUC1-227ENST00000615517 Q5XG85 94 aa3.38□□□□□ -1.87
MUC1-227ENST00000615517 ATP11AUNQ6ZP68 121 aa3.38□□□□□ -1.87
MUC1-227ENST00000615517 Q6ZRX8 168 aa3.38□□□□□ -1.87
MUC1-227ENST00000615517 C20orf166-AS1Q96NR2 134 aa3.38□□□□□ -1.87
MUC1-227ENST00000615517 SMIM7Q9BQ49 75 aa3.38□□□□□ -1.87
MUC1-227ENST00000615517 RPL23P62829 140 aaKnown RBP3.37□□□□□ -1.87
MUC1-227ENST00000615517 SMIM29Q86T20 159 aa3.37□□□□□ -1.87
MUC1-227ENST00000615517 TOMM6Q96B49 74 aa3.37□□□□□ -1.87
MUC1-227ENST00000615517 MAP1LC3AQ9H492 121 aa3.37□□□□□ -1.87
MUC1-227ENST00000615517 A0A0U1RRA0 63 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms