RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 COX7B2Q8TF08 81 aa3.48□□□□□ -1.85
CPNE3-208ENST00000614678 TSPEAR-AS2P59090 65 aa3.48□□□□□ -1.85
CPNE3-208ENST00000614678 C1orf137Q5JT78 98 aa3.48□□□□□ -1.85
CPNE3-208ENST00000614678 Q8IZM0 81 aa3.48□□□□□ -1.85
CPNE3-208ENST00000614678 KRTAP29-1A8MX34 341 aaPredicted RBP3.48□□□□□ -1.85
CPNE3-208ENST00000614678 NDUFC2-KCTD14E9PQ53 114 aa3.48□□□□□ -1.85
CPNE3-208ENST00000614678 PRSS2P07478 247 aa3.48□□□□□ -1.85
CPNE3-208ENST00000614678 IGLC3P0DOY3 106 aa3.48□□□□□ -1.85
CPNE3-208ENST00000614678 SMAGPQ0VAQ4 97 aa3.48□□□□□ -1.85
CPNE3-208ENST00000614678 M0QXV9 152 aa3.47□□□□□ -1.85
CPNE3-208ENST00000614678 SRSF9Q13242 221 aaKnown RBP eCLIP3.47□□□□□ -1.85
CPNE3-208ENST00000614678 IFI27L1Q96BM0 104 aa3.47□□□□□ -1.85
CPNE3-208ENST00000614678 ANAPC11Q9NYG5 84 aa3.47□□□□□ -1.85
CPNE3-208ENST00000614678 F8VRH5 84 aa3.47□□□□□ -1.85
CPNE3-208ENST00000614678 COX19Q49B96 90 aa3.47□□□□□ -1.85
CPNE3-208ENST00000614678 DAND5Q8N907 189 aa3.47□□□□□ -1.85
CPNE3-208ENST00000614678 C7orf33Q8WU49 177 aa3.46□□□□□ -1.85
CPNE3-208ENST00000614678 C22orf24Q9Y442 160 aa3.46□□□□□ -1.85
CPNE3-208ENST00000614678 IGLV5-39A0A0G2JS06 123 aa3.46□□□□□ -1.86
CPNE3-208ENST00000614678 HSBP1O75506 76 aa3.46□□□□□ -1.86
CPNE3-208ENST00000614678 TLX1NBP0CAT3 122 aa3.46□□□□□ -1.86
CPNE3-208ENST00000614678 OCIAD2Q56VL3 154 aa3.46□□□□□ -1.86
CPNE3-208ENST00000614678 TTTY13Q9BZ97 58 aa3.46□□□□□ -1.86
CPNE3-208ENST00000614678 IGKV2-28A0A075B6P5 120 aa3.46□□□□□ -1.86
CPNE3-208ENST00000614678 IGKV2D-28P01615 120 aa3.46□□□□□ -1.86
CPNE3-208ENST00000614678 TRBV30A0A0K0K1B3 111 aa3.46□□□□□ -1.86
CPNE3-208ENST00000614678 RNF151Q2KHN1 245 aa3.45□□□□□ -1.86
CPNE3-208ENST00000614678 TMEM223A0PJW6 202 aa3.45□□□□□ -1.86
CPNE3-208ENST00000614678 PAPPA-AS1Q5QFB9 102 aa3.45□□□□□ -1.86
CPNE3-208ENST00000614678 COL5A1-AS1Q5SY13 56 aa3.45□□□□□ -1.86
CPNE3-208ENST00000614678 LINC00474Q9P2X8 69 aa3.45□□□□□ -1.86
CPNE3-208ENST00000614678 UBE2BP63146 152 aa3.44□□□□□ -1.86
CPNE3-208ENST00000614678 PRR26Q8N8Z3 221 aa3.44□□□□□ -1.86
CPNE3-208ENST00000614678 CHCHD1Q96BP2 118 aaKnown RBP3.44□□□□□ -1.86
CPNE3-208ENST00000614678 LINC00167Q96N53 147 aa3.44□□□□□ -1.86
CPNE3-208ENST00000614678 LEPROTL1O95214 131 aa3.44□□□□□ -1.86
CPNE3-208ENST00000614678 SND1-IT1Q9HBX3 110 aa3.44□□□□□ -1.86
CPNE3-208ENST00000614678 IGLV7-43P04211 117 aa3.44□□□□□ -1.86
CPNE3-208ENST00000614678 C20orf202A1L168 122 aa3.43□□□□□ -1.86
CPNE3-208ENST00000614678 ATP5LO75964 103 aa3.43□□□□□ -1.86
CPNE3-208ENST00000614678 KRTAP1-4P0C5Y4 121 aa3.43□□□□□ -1.86
CPNE3-208ENST00000614678 SMIM13P0DJ93 91 aa3.43□□□□□ -1.86
CPNE3-208ENST00000614678 SEC11AP67812 179 aa3.43□□□□□ -1.86
CPNE3-208ENST00000614678 ERG28Q9UKR5 140 aa3.43□□□□□ -1.86
CPNE3-208ENST00000614678 TAX1BP3O14907 124 aa3.43□□□□□ -1.86
CPNE3-208ENST00000614678 NPC2P61916 151 aa3.43□□□□□ -1.86
CPNE3-208ENST00000614678 LINC01561Q8N1V8 128 aa3.43□□□□□ -1.86
CPNE3-208ENST00000614678 TP73-AS1Q9UF72 201 aa3.43□□□□□ -1.86
CPNE3-208ENST00000614678 ATOH7Q8N100 152 aa3.43□□□□□ -1.86
CPNE3-208ENST00000614678 LINC01600Q96MT4 127 aa3.43□□□□□ -1.86
CPNE3-208ENST00000614678 IGKV2D-26A0A0A0MRZ7 120 aa3.42□□□□□ -1.86
CPNE3-208ENST00000614678 PRLHP81277 87 aa3.42□□□□□ -1.86
CPNE3-208ENST00000614678 MRPL55Q7Z7F7 128 aaKnown RBP3.42□□□□□ -1.86
CPNE3-208ENST00000614678 A0A087X002 238 aa3.42□□□□□ -1.86
CPNE3-208ENST00000614678 VPREB1P12018 145 aa3.42□□□□□ -1.86
CPNE3-208ENST00000614678 KRTAP10-8P60410 259 aa3.42□□□□□ -1.86
CPNE3-208ENST00000614678 TRAV12-1A0A0B4J245 112 aa3.42□□□□□ -1.86
CPNE3-208ENST00000614678 H3BRM9 83 aa3.41□□□□□ -1.86
CPNE3-208ENST00000614678 ADAMTSL4-AS1Q5T5F5 129 aa3.41□□□□□ -1.86
CPNE3-208ENST00000614678 OXTP01178 125 aa3.41□□□□□ -1.86
CPNE3-208ENST00000614678 LINC00158P58513 81 aa3.41□□□□□ -1.86
CPNE3-208ENST00000614678 SPINK6Q6UWN8 80 aa3.41□□□□□ -1.86
CPNE3-208ENST00000614678 MIR7-3HGQ8N6C7 128 aa3.41□□□□□ -1.86
CPNE3-208ENST00000614678 NCR3O14931 201 aa3.41□□□□□ -1.86
CPNE3-208ENST00000614678 TSPAN13O95857 204 aa3.4□□□□□ -1.86
CPNE3-208ENST00000614678 C3orf79P0CE67 100 aa3.4□□□□□ -1.86
CPNE3-208ENST00000614678 SOSTDC1Q6X4U4 206 aa3.4□□□□□ -1.86
CPNE3-208ENST00000614678 NDUFA12Q9UI09 145 aa3.4□□□□□ -1.86
CPNE3-208ENST00000614678 F8WDY8 70 aa3.39□□□□□ -1.87
CPNE3-208ENST00000614678 H0Y9J4 135 aa3.39□□□□□ -1.87
CPNE3-208ENST00000614678 SYS1-DBNDD2H3BUS1 97 aa3.39□□□□□ -1.87
CPNE3-208ENST00000614678 CXCL5P42830 114 aa3.39□□□□□ -1.87
CPNE3-208ENST00000614678 PAM16Q9Y3D7 125 aa3.39□□□□□ -1.87
CPNE3-208ENST00000614678 PLEKHB2Q96CS7 222 aa3.39□□□□□ -1.87
CPNE3-208ENST00000614678 MEIG1Q5JSS6 88 aa3.39□□□□□ -1.87
CPNE3-208ENST00000614678 IGLV1-50A0A075B6I6 118 aa3.39□□□□□ -1.87
CPNE3-208ENST00000614678 M0R378 163 aa3.39□□□□□ -1.87
CPNE3-208ENST00000614678 IGKCP01834 107 aa3.39□□□□□ -1.87
CPNE3-208ENST00000614678 SCGB1A1P11684 91 aa3.39□□□□□ -1.87
CPNE3-208ENST00000614678 KRTDAPP60985 99 aa3.39□□□□□ -1.87
CPNE3-208ENST00000614678 BOD1L2Q8IYS8 172 aa3.39□□□□□ -1.87
CPNE3-208ENST00000614678 LINC01549A6NIU2 74 aa3.38□□□□□ -1.87
CPNE3-208ENST00000614678 J3QQQ9 107 aa3.38□□□□□ -1.87
CPNE3-208ENST00000614678 SCGB1D1O95968 90 aa3.38□□□□□ -1.87
CPNE3-208ENST00000614678 KRTAP13-1Q8IUC0 172 aa3.38□□□□□ -1.87
CPNE3-208ENST00000614678 ZNF861PO60384 105 aa3.38□□□□□ -1.87
CPNE3-208ENST00000614678 DPM2O94777 84 aa3.38□□□□□ -1.87
CPNE3-208ENST00000614678 PLA2G2DQ9UNK4 145 aa3.38□□□□□ -1.87
CPNE3-208ENST00000614678 NKAPP1Q8N9T2 125 aa3.38□□□□□ -1.87
CPNE3-208ENST00000614678 TMEM126AQ9H061 195 aa3.38□□□□□ -1.87
CPNE3-208ENST00000614678 KRTAP13-2Q52LG2 175 aa3.37□□□□□ -1.87
CPNE3-208ENST00000614678 HSPB8Q9UJY1 196 aa3.37□□□□□ -1.87
CPNE3-208ENST00000614678 MAP1LC3CQ9BXW4 147 aa3.37□□□□□ -1.87
CPNE3-208ENST00000614678 TRBV10-3A0A0K0K1G6 114 aa3.37□□□□□ -1.87
CPNE3-208ENST00000614678 LEPROTO15243 131 aa3.37□□□□□ -1.87
CPNE3-208ENST00000614678 SPATA45Q537H7 98 aa3.37□□□□□ -1.87
CPNE3-208ENST00000614678 LITAFQ99732 161 aa3.37□□□□□ -1.87
CPNE3-208ENST00000614678 UQCR10Q9UDW1 63 aa3.37□□□□□ -1.87
CPNE3-208ENST00000614678 BCE1O60756 84 aa3.36□□□□□ -1.87
CPNE3-208ENST00000614678 BATFQ16520 125 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms