RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 TMEM126AQ9H061 195 aa13.42□□□□□ -0.26
FAM228B-208ENST00000613899 HSBP1O75506 76 aa13.4□□□□□ -0.26
FAM228B-208ENST00000613899 LINC00158P58513 81 aa13.4□□□□□ -0.26
FAM228B-208ENST00000613899 FAM19A1Q7Z5A9 133 aa13.4□□□□□ -0.26
FAM228B-208ENST00000613899 PRLHP81277 87 aa13.39□□□□□ -0.27
FAM228B-208ENST00000613899 FAM229BQ4G0N7 80 aa13.39□□□□□ -0.27
FAM228B-208ENST00000613899 TMEM238C9JI98 176 aa13.38□□□□□ -0.27
FAM228B-208ENST00000613899 CBLN2Q8IUK8 224 aa13.38□□□□□ -0.27
FAM228B-208ENST00000613899 Q8NDZ9 215 aa13.38□□□□□ -0.27
FAM228B-208ENST00000613899 TSPAN13O95857 204 aa13.37□□□□□ -0.27
FAM228B-208ENST00000613899 ANAPC11Q9NYG5 84 aa13.37□□□□□ -0.27
FAM228B-208ENST00000613899 M0R378 163 aa13.36□□□□□ -0.27
FAM228B-208ENST00000613899 A0A0U1RRA0 63 aa13.35□□□□□ -0.27
FAM228B-208ENST00000613899 FAM19A2Q8N3H0 131 aa13.35□□□□□ -0.27
FAM228B-208ENST00000613899 ATP6V1G1O75348 118 aa13.34□□□□□ -0.27
FAM228B-208ENST00000613899 HERV-K104P63124 156 aa13.34□□□□□ -0.27
FAM228B-208ENST00000613899 KRTAP13-2Q52LG2 175 aa13.34□□□□□ -0.27
FAM228B-208ENST00000613899 MEIG1Q5JSS6 88 aa13.34□□□□□ -0.27
FAM228B-208ENST00000613899 LINC00587B1AMM8 73 aa13.31□□□□□ -0.28
FAM228B-208ENST00000613899 TRGC2P03986 189 aa13.31□□□□□ -0.28
FAM228B-208ENST00000613899 SMIM13P0DJ93 91 aa13.31□□□□□ -0.28
FAM228B-208ENST00000613899 IGKV2D-26A0A0A0MRZ7 120 aa13.3□□□□□ -0.28
FAM228B-208ENST00000613899 H0Y8G0 127 aa13.3□□□□□ -0.28
FAM228B-208ENST00000613899 LEPROTL1O95214 131 aa13.29□□□□□ -0.28
FAM228B-208ENST00000613899 NDUFA12Q9UI09 145 aa13.29□□□□□ -0.28
FAM228B-208ENST00000613899 BOD1L2Q8IYS8 172 aa13.28□□□□□ -0.28
FAM228B-208ENST00000613899 MIR7-3HGQ8N6C7 128 aa13.28□□□□□ -0.28
FAM228B-208ENST00000613899 LINC00304Q8N9R0 145 aa13.28□□□□□ -0.28
FAM228B-208ENST00000613899 MYMXA0A1B0GTQ4 84 aa13.27□□□□□ -0.29
FAM228B-208ENST00000613899 SERF1AO75920 110 aa13.27□□□□□ -0.29
FAM228B-208ENST00000613899 PLEKHB2Q96CS7 222 aa13.27□□□□□ -0.29
FAM228B-208ENST00000613899 HIGD2AQ9BW72 106 aa13.27□□□□□ -0.29
FAM228B-208ENST00000613899 MAP1LC3CQ9BXW4 147 aa13.27□□□□□ -0.29
FAM228B-208ENST00000613899 PRYO14603 147 aa13.26□□□□□ -0.29
FAM228B-208ENST00000613899 PLNP26678 52 aa13.25□□□□□ -0.29
FAM228B-208ENST00000613899 LINC00310P59036 64 aa13.25□□□□□ -0.29
FAM228B-208ENST00000613899 HSPB8Q9UJY1 196 aa13.24□□□□□ -0.29
FAM228B-208ENST00000613899 NCR3O14931 201 aa13.23□□□□□ -0.29
FAM228B-208ENST00000613899 LEPROTO15243 131 aa13.22□□□□□ -0.29
FAM228B-208ENST00000613899 CTAG1AP78358 180 aa13.22□□□□□ -0.29
FAM228B-208ENST00000613899 ZNF706Q9Y5V0 76 aaPredicted RBP13.21□□□□□ -0.29
FAM228B-208ENST00000613899 TSPEAR-AS2P59090 65 aa13.2□□□□□ -0.3
FAM228B-208ENST00000613899 HERVK_113P61574 105 aa13.2□□□□□ -0.3
FAM228B-208ENST00000613899 LINC00337Q8N6G1 96 aa13.2□□□□□ -0.3
FAM228B-208ENST00000613899 KCNQ1DNQ9H478 68 aa13.2□□□□□ -0.3
FAM228B-208ENST00000613899 DPM2O94777 84 aa13.19□□□□□ -0.3
FAM228B-208ENST00000613899 SPRR1AP35321 89 aa13.19□□□□□ -0.3
FAM228B-208ENST00000613899 SPRR4Q96PI1 79 aa13.19□□□□□ -0.3
FAM228B-208ENST00000613899 FABP4P15090 132 aa13.18□□□□□ -0.3
FAM228B-208ENST00000613899 S100A12P80511 92 aa13.18□□□□□ -0.3
FAM228B-208ENST00000613899 J3QQQ9 107 aa13.17□□□□□ -0.3
FAM228B-208ENST00000613899 NMUP48645 174 aa13.17□□□□□ -0.3
FAM228B-208ENST00000613899 C3orf22Q8N5N4 141 aa13.17□□□□□ -0.3
FAM228B-208ENST00000613899 TRBV10-3A0A0K0K1G6 114 aa13.16□□□□□ -0.3
FAM228B-208ENST00000613899 ETDCA0A1B0GVM5 59 aa13.16□□□□□ -0.3
FAM228B-208ENST00000613899 IGKCP01834 107 aa13.16□□□□□ -0.3
FAM228B-208ENST00000613899 RETNLBQ9BQ08 111 aa13.16□□□□□ -0.3
FAM228B-208ENST00000613899 LOC107984156A0A0G2JMH3 177 aa13.15□□□□□ -0.3
FAM228B-208ENST00000613899 ARL17AQ8IVW1 177 aa13.15□□□□□ -0.3
FAM228B-208ENST00000613899 SLC7A5P1Q8MH63 180 aa13.15□□□□□ -0.3
FAM228B-208ENST00000613899 COLCA2A8K830 154 aa13.14□□□□□ -0.31
FAM228B-208ENST00000613899 LGALS3P17931 250 aaKnown RBP13.14□□□□□ -0.31
FAM228B-208ENST00000613899 DAND5Q8N907 189 aa13.14□□□□□ -0.31
FAM228B-208ENST00000613899 PMCHL2Q9BQD1 86 aa13.14□□□□□ -0.31
FAM228B-208ENST00000613899 KRTAP4-16G5E9R7 235 aaPredicted RBP13.13□□□□□ -0.31
FAM228B-208ENST00000613899 MIEN1Q9BRT3 115 aa13.13□□□□□ -0.31
FAM228B-208ENST00000613899 TRBV10-2A0A0K0K1G8 114 aa13.12□□□□□ -0.31
FAM228B-208ENST00000613899 SPAG11AQ6PDA7 123 aa13.11□□□□□ -0.31
FAM228B-208ENST00000613899 DDTP30046 118 aa13.1□□□□□ -0.31
FAM228B-208ENST00000613899 SMCR5Q8TEV8 140 aa13.1□□□□□ -0.31
FAM228B-208ENST00000613899 SPANXB1Q9NS25 103 aaPredicted RBP13.1□□□□□ -0.31
FAM228B-208ENST00000613899 TPRXLQ17RH7 258 aa13.08□□□□□ -0.32
FAM228B-208ENST00000613899 MUC2Q02817 5179 aa13.07□□□□□ -0.32
FAM228B-208ENST00000613899 B5MCH6 92 aa13.06□□□□□ -0.32
FAM228B-208ENST00000613899 NDUFC2O95298 119 aa13.06□□□□□ -0.32
FAM228B-208ENST00000613899 C4orf48Q5BLP8 95 aa13.06□□□□□ -0.32
FAM228B-208ENST00000613899 IGLV7-46A0A075B6I9 117 aa13.05□□□□□ -0.32
FAM228B-208ENST00000613899 PPDPFQ9H3Y8 114 aa13.05□□□□□ -0.32
FAM228B-208ENST00000613899 A0A0U1RQV1 116 aa13.04□□□□□ -0.32
FAM228B-208ENST00000613899 E9PLD3 99 aa13.04□□□□□ -0.32
FAM228B-208ENST00000613899 LINC00483Q53H64 154 aa13.04□□□□□ -0.32
FAM228B-208ENST00000613899 S100A7L2Q5SY68 101 aa13.04□□□□□ -0.32
FAM228B-208ENST00000613899 CDIP1Q9H305 208 aa13.03□□□□□ -0.32
FAM228B-208ENST00000613899 A0A0J9YXY3 114 aa13.02□□□□□ -0.33
FAM228B-208ENST00000613899 Q6ZRX8 168 aa13.02□□□□□ -0.33
FAM228B-208ENST00000613899 Q8NBF4 154 aa13.02□□□□□ -0.33
FAM228B-208ENST00000613899 SYS1-DBNDD2H3BUS1 97 aa13.01□□□□□ -0.33
FAM228B-208ENST00000613899 IGLV6-57P01721 117 aa13.01□□□□□ -0.33
FAM228B-208ENST00000613899 GAGE2AQ6NT46 116 aa13.01□□□□□ -0.33
FAM228B-208ENST00000613899 HIST1H2BKO60814 126 aa13□□□□□ -0.33
FAM228B-208ENST00000613899 HIST1H2BJP06899 126 aa13□□□□□ -0.33
FAM228B-208ENST00000613899 HIST1H2BOP23527 126 aa13□□□□□ -0.33
FAM228B-208ENST00000613899 HIST1H2BBP33778 126 aa13□□□□□ -0.33
FAM228B-208ENST00000613899 HIST1H2BDP58876 126 aa13□□□□□ -0.33
FAM228B-208ENST00000613899 HIST1H2BCP62807 126 aa13□□□□□ -0.33
FAM228B-208ENST00000613899 HIST2H2BEQ16778 126 aa13□□□□□ -0.33
FAM228B-208ENST00000613899 HIST2H2BFQ5QNW6 126 aaPredicted RBP13□□□□□ -0.33
FAM228B-208ENST00000613899 HIST1H2BHQ93079 126 aa13□□□□□ -0.33
FAM228B-208ENST00000613899 HIST1H2BNQ99877 126 aa13□□□□□ -0.33
FAM228B-208ENST00000613899 HIST1H2BMQ99879 126 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms