RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 OBSCN-AS1Q96MR7 158 aa10.03□□□□□ -0.8
CDH1-213ENST00000612417 REG3AQ06141 175 aa10.02□□□□□ -0.81
CDH1-213ENST00000612417 ANGP03950 147 aaKnown RBP10.01□□□□□ -0.81
CDH1-213ENST00000612417 CRYGAP11844 174 aa10.01□□□□□ -0.81
CDH1-213ENST00000612417 GAGE2AQ6NT46 116 aa10.01□□□□□ -0.81
CDH1-213ENST00000612417 K7EIL1 84 aa10□□□□□ -0.81
CDH1-213ENST00000612417 LECT2O14960 151 aa10□□□□□ -0.81
CDH1-213ENST00000612417 PRO0628Q9UI54 55 aa10□□□□□ -0.81
CDH1-213ENST00000612417 TENM3Q9P273 2699 aa9.99□□□□□ -0.81
CDH1-213ENST00000612417 TMEM258P61165 79 aa9.99□□□□□ -0.81
CDH1-213ENST00000612417 Q8N3U1 123 aa9.99□□□□□ -0.81
CDH1-213ENST00000612417 A0A0J9YWU9 116 aa9.98□□□□□ -0.81
CDH1-213ENST00000612417 NANOS2P60321 138 aaKnown RBP9.98□□□□□ -0.81
CDH1-213ENST00000612417 LINC00167Q96N53 147 aa9.98□□□□□ -0.81
CDH1-213ENST00000612417 COX7CP15954 63 aa9.98□□□□□ -0.81
CDH1-213ENST00000612417 SEC61GP60059 68 aa9.98□□□□□ -0.81
CDH1-213ENST00000612417 FAM236AA0A1B0GUQ0 79 aa9.97□□□□□ -0.81
CDH1-213ENST00000612417 FAM236BA0A1B0GV22 79 aa9.97□□□□□ -0.81
CDH1-213ENST00000612417 LELP1Q5T871 98 aa9.97□□□□□ -0.81
CDH1-213ENST00000612417 MUC7Q8TAX7 377 aa9.97□□□□□ -0.81
CDH1-213ENST00000612417 IGLV10-54A0A075B6I4 117 aa9.97□□□□□ -0.81
CDH1-213ENST00000612417 C9orf129Q5T035 196 aaKnown RBP9.97□□□□□ -0.81
CDH1-213ENST00000612417 KLK5Q9Y337 293 aaPredicted RBP9.97□□□□□ -0.81
CDH1-213ENST00000612417 KPRPQ5T749 579 aaPredicted RBP9.96□□□□□ -0.81
CDH1-213ENST00000612417 ORMDL1Q9P0S3 153 aa9.96□□□□□ -0.81
CDH1-213ENST00000612417 Q6ZTC4 211 aa9.95□□□□□ -0.82
CDH1-213ENST00000612417 DPH3Q96FX2 82 aa9.95□□□□□ -0.82
CDH1-213ENST00000612417 PRR34Q9NV39 138 aa9.95□□□□□ -0.82
CDH1-213ENST00000612417 C14orf132Q9NPU4 83 aa9.94□□□□□ -0.82
CDH1-213ENST00000612417 PRR3P79522 188 aaKnown RBP9.94□□□□□ -0.82
CDH1-213ENST00000612417 C11orf45Q8TAV5 145 aa9.94□□□□□ -0.82
CDH1-213ENST00000612417 C9orf116Q5BN46 136 aaPredicted RBP9.93□□□□□ -0.82
CDH1-213ENST00000612417 Q5XG85 94 aa9.93□□□□□ -0.82
CDH1-213ENST00000612417 HRCT1Q6UXD1 115 aa9.93□□□□□ -0.82
CDH1-213ENST00000612417 Q8N814 137 aa9.92□□□□□ -0.82
CDH1-213ENST00000612417 SLPIP03973 132 aa9.92□□□□□ -0.82
CDH1-213ENST00000612417 C4orf26Q17RF5 130 aa9.92□□□□□ -0.82
CDH1-213ENST00000612417 TM2D3Q9BRN9 247 aa9.92□□□□□ -0.82
CDH1-213ENST00000612417 SPAG11BQ08648 103 aa9.91□□□□□ -0.82
CDH1-213ENST00000612417 NCR3O14931 201 aa9.91□□□□□ -0.82
CDH1-213ENST00000612417 Q8NDZ9 215 aa9.91□□□□□ -0.82
CDH1-213ENST00000612417 V9GYY9 64 aa9.89□□□□□ -0.83
CDH1-213ENST00000612417 DEFB131BA0A096LNP1 70 aa9.89□□□□□ -0.83
CDH1-213ENST00000612417 GVQW2A0A096LPI5 108 aaPredicted RBP9.89□□□□□ -0.83
CDH1-213ENST00000612417 TMEM256-PLSCR3K7ERE1 68 aa9.89□□□□□ -0.83
CDH1-213ENST00000612417 C10orf25Q5T742 122 aa9.89□□□□□ -0.83
CDH1-213ENST00000612417 UNQ6190/PRO20217Q6UXQ8 127 aa9.89□□□□□ -0.83
CDH1-213ENST00000612417 JMJD7-PLA2G4BH0Y9G9 81 aa9.88□□□□□ -0.83
CDH1-213ENST00000612417 ATOX1O00244 68 aa9.88□□□□□ -0.83
CDH1-213ENST00000612417 ENHOQ6UWT2 76 aa9.88□□□□□ -0.83
CDH1-213ENST00000612417 C6orf223Q8N319 242 aa9.88□□□□□ -0.83
CDH1-213ENST00000612417 KLK12Q9UKR0 248 aa9.88□□□□□ -0.83
CDH1-213ENST00000612417 C1orf43Q9BWL3 253 aa9.87□□□□□ -0.83
CDH1-213ENST00000612417 C6orf99Q4VX62 202 aa9.87□□□□□ -0.83
CDH1-213ENST00000612417 Q6JHZ5 121 aa9.87□□□□□ -0.83
CDH1-213ENST00000612417 C2orf48Q96LS8 159 aa9.87□□□□□ -0.83
CDH1-213ENST00000612417 LINC00846Q9NV44 126 aa9.87□□□□□ -0.83
CDH1-213ENST00000612417 H3BNG1 76 aa9.86□□□□□ -0.83
CDH1-213ENST00000612417 CCKP06307 115 aa9.86□□□□□ -0.83
CDH1-213ENST00000612417 S100A7L2Q5SY68 101 aa9.86□□□□□ -0.83
CDH1-213ENST00000612417 LYPD5Q6UWN5 251 aa9.86□□□□□ -0.83
CDH1-213ENST00000612417 HIST1H4AP62805 103 aaKnown RBP9.86□□□□□ -0.83
CDH1-213ENST00000612417 IGLV6-57P01721 117 aa9.85□□□□□ -0.83
CDH1-213ENST00000612417 LINC00575Q6W349 94 aa9.85□□□□□ -0.83
CDH1-213ENST00000612417 HUWE1Q7Z6Z7 4374 aaKnown RBP9.83□□□□□ -0.84
CDH1-213ENST00000612417 TRAV10A0A0B4J240 114 aa9.82□□□□□ -0.84
CDH1-213ENST00000612417 hADV29S1A0JD25 119 aa9.81□□□□□ -0.84
CDH1-213ENST00000612417 C6orf48Q9UBA6 75 aa9.81□□□□□ -0.84
CDH1-213ENST00000612417 NDUFC2-KCTD14E9PQ53 114 aa9.81□□□□□ -0.84
CDH1-213ENST00000612417 OXTP01178 125 aa9.81□□□□□ -0.84
CDH1-213ENST00000612417 COL7A1Q02388 2944 aa9.81□□□□□ -0.84
CDH1-213ENST00000612417 RPL18AQ02543 176 aaKnown RBP9.79□□□□□ -0.84
CDH1-213ENST00000612417 ESRGQ1W209 222 aa9.79□□□□□ -0.84
CDH1-213ENST00000612417 KRTAP26-1Q6PEX3 210 aa9.78□□□□□ -0.84
CDH1-213ENST00000612417 B9D2Q9BPU9 175 aa9.78□□□□□ -0.84
CDH1-213ENST00000612417 IGKV3D-7A0A0C4DH55 119 aa9.78□□□□□ -0.84
CDH1-213ENST00000612417 WFDC10BQ8IUB3 73 aa9.78□□□□□ -0.84
CDH1-213ENST00000612417 H3BQ85 93 aa9.77□□□□□ -0.85
CDH1-213ENST00000612417 ZNF561-AS1K7EIQ3 104 aa9.77□□□□□ -0.85
CDH1-213ENST00000612417 ATP5EP2Q5VTU8 51 aa9.77□□□□□ -0.85
CDH1-213ENST00000612417 DSCR8Q96T75 97 aa9.76□□□□□ -0.85
CDH1-213ENST00000612417 TRAV23DV6A0A075B6W5 121 aa9.75□□□□□ -0.85
CDH1-213ENST00000612417 LOC110117498A0A087WWA1 95 aa9.75□□□□□ -0.85
CDH1-213ENST00000612417 TRBV10-3A0A0K0K1G6 114 aa9.75□□□□□ -0.85
CDH1-213ENST00000612417 LINC00336Q6ZUF6 198 aa9.75□□□□□ -0.85
CDH1-213ENST00000612417 SERP2Q8N6R1 65 aa9.75□□□□□ -0.85
CDH1-213ENST00000612417 C1orf195Q5TG92 126 aa9.75□□□□□ -0.85
CDH1-213ENST00000612417 UPK3BQ9BT76 320 aa9.75□□□□□ -0.85
CDH1-213ENST00000612417 STAB2Q8WWQ8 2551 aa9.75□□□□□ -0.85
CDH1-213ENST00000612417 DNAH9Q9NYC9 4486 aa9.74□□□□□ -0.85
CDH1-213ENST00000612417 RBM3P98179 157 aaKnown RBP9.74□□□□□ -0.85
CDH1-213ENST00000612417 DIRC1Q969H9 104 aa9.74□□□□□ -0.85
CDH1-213ENST00000612417 XAGE1AQ9HD64 81 aa9.74□□□□□ -0.85
CDH1-213ENST00000612417 TRBV7-6A0A0J9YX20 115 aa9.73□□□□□ -0.85
CDH1-213ENST00000612417 Q6ZQT0 140 aa9.73□□□□□ -0.85
CDH1-213ENST00000612417 CAMK2N2Q96S95 79 aa9.73□□□□□ -0.85
CDH1-213ENST00000612417 PKIGQ9Y2B9 76 aa9.73□□□□□ -0.85
CDH1-213ENST00000612417 DNHD1Q96M86 4753 aa9.73□□□□□ -0.85
CDH1-213ENST00000612417 EPM2AB3EWF7 344 aa9.73□□□□□ -0.85
CDH1-213ENST00000612417 VPREB1P12018 145 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms