RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 FAM19A4Q96LR4 140 aa7.69□□□□□ -1.18
SHANK2-219ENST00000606715 TRBV7-7A0A0K0K1E9 115 aa7.69□□□□□ -1.18
SHANK2-219ENST00000606715 C7orf65Q6ZTY9 151 aa7.68□□□□□ -1.18
SHANK2-219ENST00000606715 KIF25-AS1Q9Y6Z4 181 aa7.68□□□□□ -1.18
SHANK2-219ENST00000606715 RPL37AP61513 92 aaKnown RBP7.68□□□□□ -1.18
SHANK2-219ENST00000606715 H0Y9P7 68 aa7.68□□□□□ -1.18
SHANK2-219ENST00000606715 A0A087WYN8 130 aa7.67□□□□□ -1.18
SHANK2-219ENST00000606715 EPG5Q9HCE0 2579 aa7.66□□□□□ -1.18
SHANK2-219ENST00000606715 ATP11AUNQ6ZP68 121 aa7.66□□□□□ -1.18
SHANK2-219ENST00000606715 Q8N3U1 123 aa7.65□□□□□ -1.18
SHANK2-219ENST00000606715 TET2Q6N021 2002 aaPredicted RBP7.65□□□□□ -1.18
SHANK2-219ENST00000606715 GOLGB1Q14789 3259 aaKnown RBP7.65□□□□□ -1.19
SHANK2-219ENST00000606715 URB1-AS1Q96HZ7 61 aa7.65□□□□□ -1.19
SHANK2-219ENST00000606715 PCSK5Q92824 1860 aa7.63□□□□□ -1.19
SHANK2-219ENST00000606715 LINC00167Q96N53 147 aa7.63□□□□□ -1.19
SHANK2-219ENST00000606715 PHF5AQ7RTV0 110 aaKnown RBP7.63□□□□□ -1.19
SHANK2-219ENST00000606715 CHTF8P0CG12 524 aa7.63□□□□□ -1.19
SHANK2-219ENST00000606715 MTORP42345 2549 aa7.62□□□□□ -1.19
SHANK2-219ENST00000606715 A8MTW9 85 aa7.62□□□□□ -1.19
SHANK2-219ENST00000606715 ANKRD17O75179 2603 aaKnown RBP7.62□□□□□ -1.19
SHANK2-219ENST00000606715 SETD2Q9BYW2 2564 aaPredicted RBP7.61□□□□□ -1.19
SHANK2-219ENST00000606715 LINC00310P59036 64 aa7.61□□□□□ -1.19
SHANK2-219ENST00000606715 A0A096LNT2 108 aa7.6□□□□□ -1.19
SHANK2-219ENST00000606715 Q8NBF4 154 aa7.6□□□□□ -1.19
SHANK2-219ENST00000606715 LINC00588Q9Y4M8 146 aa7.6□□□□□ -1.19
SHANK2-219ENST00000606715 LINC01546A6NGU7 62 aa7.59□□□□□ -1.19
SHANK2-219ENST00000606715 KIAA0087Q14695 138 aa7.59□□□□□ -1.19
SHANK2-219ENST00000606715 ADAMTSL4-AS1Q5T5F5 129 aa7.59□□□□□ -1.19
SHANK2-219ENST00000606715 CDIP1Q9H305 208 aa7.59□□□□□ -1.19
SHANK2-219ENST00000606715 LINC00313P59037 77 aa7.58□□□□□ -1.2
SHANK2-219ENST00000606715 A0A096LNJ9 63 aa7.58□□□□□ -1.2
SHANK2-219ENST00000606715 CENPFP49454 3210 aa7.58□□□□□ -1.2
SHANK2-219ENST00000606715 COL27A1Q8IZC6 1860 aaPredicted RBP7.58□□□□□ -1.2
SHANK2-219ENST00000606715 TMEM254Q8TBM7 123 aa7.57□□□□□ -1.2
SHANK2-219ENST00000606715 TSPEAR-AS2P59090 65 aa7.57□□□□□ -1.2
SHANK2-219ENST00000606715 C1orf64Q8NEQ6 169 aa7.57□□□□□ -1.2
SHANK2-219ENST00000606715 Q96NJ1 140 aa7.57□□□□□ -1.2
SHANK2-219ENST00000606715 Q9UF83 564 aa7.57□□□□□ -1.2
SHANK2-219ENST00000606715 Q8NAQ8 132 aa7.57□□□□□ -1.2
SHANK2-219ENST00000606715 MUC4Q99102 2169 aa7.56□□□□□ -1.2
SHANK2-219ENST00000606715 IGHV3OR16-9A0A0B4J2B5 98 aa7.56□□□□□ -1.2
SHANK2-219ENST00000606715 IGLV5-39A0A0G2JS06 123 aa7.56□□□□□ -1.2
SHANK2-219ENST00000606715 C6orf48Q9UBA6 75 aa7.55□□□□□ -1.2
SHANK2-219ENST00000606715 EPM2AB3EWF7 344 aa7.55□□□□□ -1.2
SHANK2-219ENST00000606715 SERTAD4-AS1Q5TG53 156 aa7.55□□□□□ -1.2
SHANK2-219ENST00000606715 AGRNO00468 2067 aa7.55□□□□□ -1.2
SHANK2-219ENST00000606715 POLQO75417 2590 aa7.54□□□□□ -1.2
SHANK2-219ENST00000606715 F8P00451 2351 aa7.54□□□□□ -1.2
SHANK2-219ENST00000606715 A0A1B0GU69 56 aa7.54□□□□□ -1.2
SHANK2-219ENST00000606715 TP53AIP1Q9HCN2 124 aa7.53□□□□□ -1.2
SHANK2-219ENST00000606715 ACANP16112 2415 aa7.53□□□□□ -1.2
SHANK2-219ENST00000606715 BCE1O60756 84 aa7.52□□□□□ -1.21
SHANK2-219ENST00000606715 SPAG11AQ6PDA7 123 aa7.52□□□□□ -1.21
SHANK2-219ENST00000606715 IGLV5-45A0A087WSX0 123 aa7.52□□□□□ -1.21
SHANK2-219ENST00000606715 K7EIL1 84 aa7.51□□□□□ -1.21
SHANK2-219ENST00000606715 LINC00846Q9NV44 126 aa7.51□□□□□ -1.21
SHANK2-219ENST00000606715 ACYP2P14621 99 aa7.5□□□□□ -1.21
SHANK2-219ENST00000606715 SMR3BP02814 79 aaPredicted RBP7.5□□□□□ -1.21
SHANK2-219ENST00000606715 LINC00336Q6ZUF6 198 aa7.5□□□□□ -1.21
SHANK2-219ENST00000606715 SMIM29Q86T20 159 aa7.49□□□□□ -1.21
SHANK2-219ENST00000606715 KRTAP1-3Q8IUG1 177 aa7.48□□□□□ -1.21
SHANK2-219ENST00000606715 C19orf73Q9NVV2 129 aa7.48□□□□□ -1.21
SHANK2-219ENST00000606715 DNAH10OSP0CZ25 163 aa7.47□□□□□ -1.21
SHANK2-219ENST00000606715 LINC00304Q8N9R0 145 aa7.47□□□□□ -1.21
SHANK2-219ENST00000606715 Q6ZRX8 168 aa7.47□□□□□ -1.21
SHANK2-219ENST00000606715 LINC00476Q8WZB0 136 aa7.46□□□□□ -1.21
SHANK2-219ENST00000606715 GVQW2A0A096LPI5 108 aaPredicted RBP7.46□□□□□ -1.22
SHANK2-219ENST00000606715 SPINT4Q6UDR6 99 aa7.46□□□□□ -1.22
SHANK2-219ENST00000606715 CXCL6P80162 114 aa7.45□□□□□ -1.22
SHANK2-219ENST00000606715 FLNBO75369 2602 aaKnown RBP7.45□□□□□ -1.22
SHANK2-219ENST00000606715 CSNK1G2-AS1Q8NCQ2 148 aa7.45□□□□□ -1.22
SHANK2-219ENST00000606715 KRTAP10-11P60412 298 aa7.44□□□□□ -1.22
SHANK2-219ENST00000606715 ELOF1P60002 83 aaKnown RBP7.44□□□□□ -1.22
SHANK2-219ENST00000606715 ST20-AS1Q8NBB2 130 aa7.44□□□□□ -1.22
SHANK2-219ENST00000606715 IGLV8-61A0A075B6I0 122 aa7.43□□□□□ -1.22
SHANK2-219ENST00000606715 A0A1B0GW54 56 aa7.43□□□□□ -1.22
SHANK2-219ENST00000606715 PRO0628Q9UI54 55 aa7.43□□□□□ -1.22
SHANK2-219ENST00000606715 KRTAP1-1Q07627 177 aa7.42□□□□□ -1.22
SHANK2-219ENST00000606715 C8orf87E5RJ46 101 aa7.42□□□□□ -1.22
SHANK2-219ENST00000606715 TM2D3Q9BRN9 247 aa7.41□□□□□ -1.22
SHANK2-219ENST00000606715 C9orf92A6NGG3 77 aa7.41□□□□□ -1.22
SHANK2-219ENST00000606715 TRAV22A0A0B4J277 110 aa7.39□□□□□ -1.23
SHANK2-219ENST00000606715 RBM12B-AS1Q9P1G2 102 aa7.39□□□□□ -1.23
SHANK2-219ENST00000606715 A0A087WTM6 91 aa7.38□□□□□ -1.23
SHANK2-219ENST00000606715 KRTAP10-3P60369 221 aa7.38□□□□□ -1.23
SHANK2-219ENST00000606715 LINC00612Q8N6U2 182 aa7.38□□□□□ -1.23
SHANK2-219ENST00000606715 HECTD1Q9ULT8 2610 aa7.37□□□□□ -1.23
SHANK2-219ENST00000606715 FAM168BA1KXE4 195 aa7.37□□□□□ -1.23
SHANK2-219ENST00000606715 IGLV5-37A0A075B6J1 123 aa7.36□□□□□ -1.23
SHANK2-219ENST00000606715 VPREB1P12018 145 aa7.36□□□□□ -1.23
SHANK2-219ENST00000606715 C4orf26Q17RF5 130 aa7.35□□□□□ -1.23
SHANK2-219ENST00000606715 SSBP3-AS1Q7Z2R9 100 aa7.35□□□□□ -1.23
SHANK2-219ENST00000606715 ZNF861PO60384 105 aa7.34□□□□□ -1.23
SHANK2-219ENST00000606715 LINC00528Q8N1L1 170 aa7.34□□□□□ -1.23
SHANK2-219ENST00000606715 OBSCN-AS1Q96MR7 158 aa7.34□□□□□ -1.23
SHANK2-219ENST00000606715 LOC101927531A0A1B0GV80 90 aa7.33□□□□□ -1.24
SHANK2-219ENST00000606715 H3BPC8 53 aa7.33□□□□□ -1.24
SHANK2-219ENST00000606715 PRR34Q9NV39 138 aa7.32□□□□□ -1.24
SHANK2-219ENST00000606715 DSCR10P59022 87 aa7.32□□□□□ -1.24
SHANK2-219ENST00000606715 GIG44P09565 113 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms