RNA–Protein interactions for RNA: ENST00000601869.1

STRN4-222, Transcript of striatin 4, human

Gene STRN4, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-222	ENST00000601869		Q8N3U1	123 aa		13.31	□□□□□ -0.28
STRN4-222	ENST00000601869	SNURF	Q9Y675	71 aa		13.31	□□□□□ -0.28
STRN4-222	ENST00000601869	C19orf73	Q9NVV2	129 aa		13.31	□□□□□ -0.28
STRN4-222	ENST00000601869	DNAJC9-AS1	A6NH13	148 aa		13.29	□□□□□ -0.28
STRN4-222	ENST00000601869		M0R2N4	97 aa		13.29	□□□□□ -0.28
STRN4-222	ENST00000601869	FP248	Q71RG6	208 aa	Predicted RBP	13.29	□□□□□ -0.28
STRN4-222	ENST00000601869	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.29	□□□□□ -0.28
STRN4-222	ENST00000601869	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	13.29	□□□□□ -0.28
STRN4-222	ENST00000601869		Q6ZQY7	126 aa		13.29	□□□□□ -0.28
STRN4-222	ENST00000601869		Q8NDZ9	215 aa		13.29	□□□□□ -0.28
STRN4-222	ENST00000601869		J3QKU1	62 aa		13.28	□□□□□ -0.28
STRN4-222	ENST00000601869	CLPSL2	Q6UWE3	100 aa		13.28	□□□□□ -0.28
STRN4-222	ENST00000601869	MIF	P14174	115 aa		13.28	□□□□□ -0.28
STRN4-222	ENST00000601869	PDZD2	O15018	2839 aa		13.27	□□□□□ -0.28
STRN4-222	ENST00000601869	SPATA3	Q8NHX4	192 aa		13.27	□□□□□ -0.28
STRN4-222	ENST00000601869	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.27	□□□□□ -0.29
STRN4-222	ENST00000601869	TRBV7-6	A0A0J9YX20	115 aa		13.27	□□□□□ -0.29
STRN4-222	ENST00000601869	PRO0255	Q9UI72	69 aa		13.27	□□□□□ -0.29
STRN4-222	ENST00000601869	C2CD3	Q4AC94	2353 aa		13.26	□□□□□ -0.29
STRN4-222	ENST00000601869		A0A0J9YWU9	116 aa		13.25	□□□□□ -0.29
STRN4-222	ENST00000601869	IGLV1-51	P01701	117 aa		13.25	□□□□□ -0.29
STRN4-222	ENST00000601869	IGHV4-30-4	P0DP06	118 aa		13.25	□□□□□ -0.29
STRN4-222	ENST00000601869	C9orf116	Q5BN46	136 aa	Predicted RBP	13.25	□□□□□ -0.29
STRN4-222	ENST00000601869	LINC00269	Q8N2A0	174 aa		13.25	□□□□□ -0.29
STRN4-222	ENST00000601869	ESM1	Q9NQ30	184 aa		13.25	□□□□□ -0.29
STRN4-222	ENST00000601869	KRTAP1-1	Q07627	177 aa		13.25	□□□□□ -0.29
STRN4-222	ENST00000601869	NREP	Q16612	68 aa		13.25	□□□□□ -0.29
STRN4-222	ENST00000601869	WFDC10A	Q9H1F0	79 aa		13.25	□□□□□ -0.29
STRN4-222	ENST00000601869	DEFB130B	P0DP73	79 aa		13.24	□□□□□ -0.29
STRN4-222	ENST00000601869	DEFB130A	P0DP74	79 aa		13.24	□□□□□ -0.29
STRN4-222	ENST00000601869	DIRC1	Q969H9	104 aa		13.24	□□□□□ -0.29
STRN4-222	ENST00000601869	TM2D3	Q9BRN9	247 aa		13.24	□□□□□ -0.29
STRN4-222	ENST00000601869	REG3A	Q06141	175 aa		13.23	□□□□□ -0.29
STRN4-222	ENST00000601869	HELZ2	Q9BYK8	2649 aa	Known RBP	13.23	□□□□□ -0.29
STRN4-222	ENST00000601869	NOTCH3	Q9UM47	2321 aa		13.22	□□□□□ -0.29
STRN4-222	ENST00000601869	NF1	P21359	2839 aa		13.22	□□□□□ -0.29
STRN4-222	ENST00000601869	CUBN	O60494	3623 aa		13.22	□□□□□ -0.29
STRN4-222	ENST00000601869	TMEM254	Q8TBM7	123 aa		13.21	□□□□□ -0.29
STRN4-222	ENST00000601869	ITPR2	Q14571	2701 aa		13.21	□□□□□ -0.29
STRN4-222	ENST00000601869	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.2	□□□□□ -0.3
STRN4-222	ENST00000601869	SPAG11B	Q08648	103 aa		13.2	□□□□□ -0.3
STRN4-222	ENST00000601869	BPY2	O14599	106 aa		13.2	□□□□□ -0.3
STRN4-222	ENST00000601869	ANG	P03950	147 aa	Known RBP	13.19	□□□□□ -0.3
STRN4-222	ENST00000601869	COX7B	P24311	80 aa		13.19	□□□□□ -0.3
STRN4-222	ENST00000601869	ACAN	P16112	2415 aa		13.19	□□□□□ -0.3
STRN4-222	ENST00000601869	LINC01006	Q8NI28	216 aa		13.19	□□□□□ -0.3
STRN4-222	ENST00000601869	C1orf43	Q9BWL3	253 aa		13.17	□□□□□ -0.3
STRN4-222	ENST00000601869	ANK3	Q12955	4377 aa	Known RBP	13.17	□□□□□ -0.3
STRN4-222	ENST00000601869	UNC79	Q9P2D8	2635 aa		13.17	□□□□□ -0.3
STRN4-222	ENST00000601869	ELOF1	P60002	83 aa	Known RBP	13.17	□□□□□ -0.3
STRN4-222	ENST00000601869	UNQ6190/PRO20217	Q6UXQ8	127 aa		13.16	□□□□□ -0.3
STRN4-222	ENST00000601869	IGLV10-54	A0A075B6I4	117 aa		13.16	□□□□□ -0.3
STRN4-222	ENST00000601869	ZNF73	O43830	326 aa	Predicted RBP	13.15	□□□□□ -0.3
STRN4-222	ENST00000601869	C10orf25	Q5T742	122 aa		13.15	□□□□□ -0.3
STRN4-222	ENST00000601869	CYSRT1	A8MQ03	144 aa		13.13	□□□□□ -0.31
STRN4-222	ENST00000601869	LYRM9	A8MSI8	78 aa		13.13	□□□□□ -0.31
STRN4-222	ENST00000601869	SCX	Q7RTU7	201 aa		13.13	□□□□□ -0.31
STRN4-222	ENST00000601869	MTOR	P42345	2549 aa		13.13	□□□□□ -0.31
STRN4-222	ENST00000601869		A0A0U1RQV1	116 aa		13.12	□□□□□ -0.31
STRN4-222	ENST00000601869	PRY	O14603	147 aa		13.12	□□□□□ -0.31
STRN4-222	ENST00000601869		A0A096LPF7	62 aa		13.12	□□□□□ -0.31
STRN4-222	ENST00000601869	LINC00474	Q9P2X8	69 aa		13.12	□□□□□ -0.31
STRN4-222	ENST00000601869	OCR1	Q9BZK8	76 aa		13.11	□□□□□ -0.31
STRN4-222	ENST00000601869	WNK1	Q9H4A3	2382 aa		13.1	□□□□□ -0.31
STRN4-222	ENST00000601869	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.1	□□□□□ -0.31
STRN4-222	ENST00000601869	IGKV4-1	P06312	121 aa		13.1	□□□□□ -0.31
STRN4-222	ENST00000601869		X6R8D5	127 aa		13.1	□□□□□ -0.31
STRN4-222	ENST00000601869	CELA1	Q9UNI1	258 aa		13.08	□□□□□ -0.32
STRN4-222	ENST00000601869	FASN	P49327	2511 aa	Known RBP	13.07	□□□□□ -0.32
STRN4-222	ENST00000601869	FUS	P35637	526 aa	Known RBP eCLIP	13.07	□□□□□ -0.32
STRN4-222	ENST00000601869	ESRG	Q1W209	222 aa		13.07	□□□□□ -0.32
STRN4-222	ENST00000601869	PRR34	Q9NV39	138 aa		13.06	□□□□□ -0.32
STRN4-222	ENST00000601869		F8WDY8	70 aa		13.05	□□□□□ -0.32
STRN4-222	ENST00000601869	BRK1	Q8WUW1	75 aa		13.05	□□□□□ -0.32
STRN4-222	ENST00000601869	GCN1	Q92616	2671 aa	Known RBP	13.04	□□□□□ -0.32
STRN4-222	ENST00000601869	SMR3A	Q99954	134 aa		13.04	□□□□□ -0.32
STRN4-222	ENST00000601869	C6orf48	Q9UBA6	75 aa		13.04	□□□□□ -0.32
STRN4-222	ENST00000601869	SETX	Q7Z333	2677 aa	Known RBP	13.04	□□□□□ -0.32
STRN4-222	ENST00000601869		A0A1B0GW54	56 aa		13.03	□□□□□ -0.32
STRN4-222	ENST00000601869	LELP1	Q5T871	98 aa		13.03	□□□□□ -0.32
STRN4-222	ENST00000601869		M0R378	163 aa		13.03	□□□□□ -0.32
STRN4-222	ENST00000601869	LINC00528	Q8N1L1	170 aa		13.03	□□□□□ -0.32
STRN4-222	ENST00000601869	PKIG	Q9Y2B9	76 aa		13.02	□□□□□ -0.33
STRN4-222	ENST00000601869	VPREB1	P12018	145 aa		13.01	□□□□□ -0.33
STRN4-222	ENST00000601869	NIPBL	Q6KC79	2804 aa	eCLIP	13.01	□□□□□ -0.33
STRN4-222	ENST00000601869		Q6ZTC4	211 aa		13.01	□□□□□ -0.33
STRN4-222	ENST00000601869	FAM229B	Q4G0N7	80 aa		13	□□□□□ -0.33
STRN4-222	ENST00000601869	HIGD2B	Q4VC39	106 aa		13	□□□□□ -0.33
STRN4-222	ENST00000601869	HECTD1	Q9ULT8	2610 aa		13	□□□□□ -0.33
STRN4-222	ENST00000601869	HIVEP2	P31629	2446 aa		12.99	□□□□□ -0.33
STRN4-222	ENST00000601869	XAGE1A	Q9HD64	81 aa		12.99	□□□□□ -0.33
STRN4-222	ENST00000601869	C1orf195	Q5TG92	126 aa		12.97	□□□□□ -0.33
STRN4-222	ENST00000601869	JMJD1C	Q15652	2540 aa		12.97	□□□□□ -0.33
STRN4-222	ENST00000601869	EGFEM1P	Q0D2K5	195 aa		12.96	□□□□□ -0.33
STRN4-222	ENST00000601869	LCE6A	A0A183	80 aa		12.96	□□□□□ -0.34
STRN4-222	ENST00000601869	DAD1	P61803	113 aa		12.96	□□□□□ -0.34
STRN4-222	ENST00000601869		Q8N9L7	120 aa		12.96	□□□□□ -0.34
STRN4-222	ENST00000601869	MPLKIP	Q8TAP9	179 aa		12.94	□□□□□ -0.34
STRN4-222	ENST00000601869	KLK12	Q9UKR0	248 aa		12.94	□□□□□ -0.34
STRN4-222	ENST00000601869	HIGD2A	Q9BW72	106 aa		12.92	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms