RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 WWC2-AS2Q96NR7 200 aa7.88□□□□□ -1.15
VRK3-223ENST00000601341 CLPSL2Q6UWE3 100 aa7.87□□□□□ -1.15
VRK3-223ENST00000601341 SMIM11BQ8TCY0 68 aa7.87□□□□□ -1.15
VRK3-223ENST00000601341 IMUPQ9GZP8 106 aa7.87□□□□□ -1.15
VRK3-223ENST00000601341 PRR34Q9NV39 138 aa7.87□□□□□ -1.15
VRK3-223ENST00000601341 SDIM1Q6ZPB5 146 aa7.87□□□□□ -1.15
VRK3-223ENST00000601341 UBE2DNLQ8IWF7 75 aa7.87□□□□□ -1.15
VRK3-223ENST00000601341 DYNC2H1Q8NCM8 4307 aaKnown RBP7.86□□□□□ -1.15
VRK3-223ENST00000601341 TGP01266 2768 aa7.86□□□□□ -1.15
VRK3-223ENST00000601341 DNAH7Q8WXX0 4024 aa7.86□□□□□ -1.15
VRK3-223ENST00000601341 DNAL4O96015 105 aa7.86□□□□□ -1.15
VRK3-223ENST00000601341 KIAA0087Q14695 138 aa7.86□□□□□ -1.15
VRK3-223ENST00000601341 FAM218AQ96MZ4 157 aa7.86□□□□□ -1.15
VRK3-223ENST00000601341 TRBV7-7A0A0K0K1E9 115 aa7.85□□□□□ -1.15
VRK3-223ENST00000601341 MALP21145 153 aa7.85□□□□□ -1.15
VRK3-223ENST00000601341 PFN2P35080 140 aa7.85□□□□□ -1.15
VRK3-223ENST00000601341 CFAP161Q6P656 301 aa7.85□□□□□ -1.15
VRK3-223ENST00000601341 ENHOQ6UWT2 76 aa7.85□□□□□ -1.15
VRK3-223ENST00000601341 CHCHD10Q8WYQ3 142 aaPredicted RBP7.85□□□□□ -1.15
VRK3-223ENST00000601341 CSMD3Q7Z407 3707 aa7.85□□□□□ -1.15
VRK3-223ENST00000601341 OBSCN-AS1Q96MR7 158 aa7.84□□□□□ -1.15
VRK3-223ENST00000601341 C22orf24Q9Y442 160 aa7.84□□□□□ -1.15
VRK3-223ENST00000601341 IGLV10-54A0A075B6I4 117 aa7.83□□□□□ -1.16
VRK3-223ENST00000601341 LINC00643Q86TS7 51 aa7.82□□□□□ -1.16
VRK3-223ENST00000601341 ANAPC13Q9BS18 74 aa7.82□□□□□ -1.16
VRK3-223ENST00000601341 TMEM126AQ9H061 195 aa7.82□□□□□ -1.16
VRK3-223ENST00000601341 NDUFV3P56181 108 aaKnown RBP7.82□□□□□ -1.16
VRK3-223ENST00000601341 TTC32Q5I0X7 151 aa7.82□□□□□ -1.16
VRK3-223ENST00000601341 LINC00167Q96N53 147 aa7.82□□□□□ -1.16
VRK3-223ENST00000601341 PLECQ15149 4684 aaKnown RBP7.81□□□□□ -1.16
VRK3-223ENST00000601341 STARD9Q9P2P6 4700 aa7.81□□□□□ -1.16
VRK3-223ENST00000601341 GVQW2A0A096LPI5 108 aaPredicted RBP7.8□□□□□ -1.16
VRK3-223ENST00000601341 OR13C6PQ8NH95 151 aa7.8□□□□□ -1.16
VRK3-223ENST00000601341 TENM2Q9NT68 2774 aa7.8□□□□□ -1.16
VRK3-223ENST00000601341 A0A087WYN8 130 aa7.79□□□□□ -1.16
VRK3-223ENST00000601341 C3orf84H3BNL1 204 aa7.79□□□□□ -1.16
VRK3-223ENST00000601341 C1orf43Q9BWL3 253 aa7.79□□□□□ -1.16
VRK3-223ENST00000601341 CASC10Q5T4H9 136 aa7.79□□□□□ -1.16
VRK3-223ENST00000601341 IGKV2D-24A0A075B6R9 120 aa7.78□□□□□ -1.16
VRK3-223ENST00000601341 Q9HAA7 133 aa7.78□□□□□ -1.16
VRK3-223ENST00000601341 ORMDL1Q9P0S3 153 aa7.78□□□□□ -1.16
VRK3-223ENST00000601341 LECT2O14960 151 aa7.77□□□□□ -1.17
VRK3-223ENST00000601341 RMI2Q96E14 147 aa7.77□□□□□ -1.17
VRK3-223ENST00000601341 H3BQ85 93 aa7.76□□□□□ -1.17
VRK3-223ENST00000601341 SPAG11BQ08648 103 aa7.76□□□□□ -1.17
VRK3-223ENST00000601341 KRTAP26-1Q6PEX3 210 aa7.76□□□□□ -1.17
VRK3-223ENST00000601341 NBDYA0A0U1RRE5 68 aa7.75□□□□□ -1.17
VRK3-223ENST00000601341 JMJD7-PLA2G4BH0Y9G9 81 aa7.75□□□□□ -1.17
VRK3-223ENST00000601341 TMEM256-PLSCR3K7ERE1 68 aa7.75□□□□□ -1.17
VRK3-223ENST00000601341 Q8N814 137 aa7.75□□□□□ -1.17
VRK3-223ENST00000601341 LYSTQ99698 3801 aa7.75□□□□□ -1.17
VRK3-223ENST00000601341 KRTAP1-5Q9BYS1 174 aa7.74□□□□□ -1.17
VRK3-223ENST00000601341 F8WDY8 70 aa7.74□□□□□ -1.17
VRK3-223ENST00000601341 GAGE2AQ6NT46 116 aa7.73□□□□□ -1.17
VRK3-223ENST00000601341 SMCR5Q8TEV8 140 aa7.73□□□□□ -1.17
VRK3-223ENST00000601341 IGLV6-57P01721 117 aa7.71□□□□□ -1.17
VRK3-223ENST00000601341 S100A7L2Q5SY68 101 aa7.71□□□□□ -1.17
VRK3-223ENST00000601341 DNAH1Q9P2D7 4330 aa7.71□□□□□ -1.17
VRK3-223ENST00000601341 LY6G6CO95867 125 aa7.71□□□□□ -1.18
VRK3-223ENST00000601341 UNQ6190/PRO20217Q6UXQ8 127 aa7.71□□□□□ -1.18
VRK3-223ENST00000601341 VPS13DQ5THJ4 4388 aa7.7□□□□□ -1.18
VRK3-223ENST00000601341 C9orf116Q5BN46 136 aaPredicted RBP7.7□□□□□ -1.18
VRK3-223ENST00000601341 LINC00575Q6W349 94 aa7.7□□□□□ -1.18
VRK3-223ENST00000601341 LINC00476Q8WZB0 136 aa7.7□□□□□ -1.18
VRK3-223ENST00000601341 ZNF561-AS1K7EIQ3 104 aa7.69□□□□□ -1.18
VRK3-223ENST00000601341 CCKP06307 115 aa7.69□□□□□ -1.18
VRK3-223ENST00000601341 C10orf25Q5T742 122 aa7.69□□□□□ -1.18
VRK3-223ENST00000601341 C14orf132Q9NPU4 83 aa7.69□□□□□ -1.18
VRK3-223ENST00000601341 TRBV7-6A0A0J9YX20 115 aa7.69□□□□□ -1.18
VRK3-223ENST00000601341 PSCAO43653 123 aa7.69□□□□□ -1.18
VRK3-223ENST00000601341 GHRHP01286 108 aa7.69□□□□□ -1.18
VRK3-223ENST00000601341 PRR3P79522 188 aaKnown RBP7.69□□□□□ -1.18
VRK3-223ENST00000601341 C6orf99Q4VX62 202 aa7.69□□□□□ -1.18
VRK3-223ENST00000601341 Q6JHZ5 121 aa7.69□□□□□ -1.18
VRK3-223ENST00000601341 C15orf56Q8N910 161 aa7.69□□□□□ -1.18
VRK3-223ENST00000601341 C2orf48Q96LS8 159 aa7.69□□□□□ -1.18
VRK3-223ENST00000601341 M0R2N4 97 aa7.68□□□□□ -1.18
VRK3-223ENST00000601341 HIGD2BQ4VC39 106 aa7.67□□□□□ -1.18
VRK3-223ENST00000601341 C9orf129Q5T035 196 aaKnown RBP7.67□□□□□ -1.18
VRK3-223ENST00000601341 C6orf223Q8N319 242 aa7.67□□□□□ -1.18
VRK3-223ENST00000601341 hADV29S1A0JD25 119 aa7.66□□□□□ -1.18
VRK3-223ENST00000601341 USP17L23D6RBM5 183 aa7.66□□□□□ -1.18
VRK3-223ENST00000601341 NCR3O14931 201 aa7.66□□□□□ -1.18
VRK3-223ENST00000601341 ATP5EP2Q5VTU8 51 aa7.66□□□□□ -1.18
VRK3-223ENST00000601341 Q6ZR54 194 aa7.66□□□□□ -1.18
VRK3-223ENST00000601341 Q8NDZ9 215 aa7.66□□□□□ -1.18
VRK3-223ENST00000601341 C6orf48Q9UBA6 75 aa7.66□□□□□ -1.18
VRK3-223ENST00000601341 FAM236AA0A1B0GUQ0 79 aa7.66□□□□□ -1.18
VRK3-223ENST00000601341 FAM236BA0A1B0GV22 79 aa7.66□□□□□ -1.18
VRK3-223ENST00000601341 SLPIP03973 132 aa7.66□□□□□ -1.18
VRK3-223ENST00000601341 HIST1H4AP62805 103 aaKnown RBP7.66□□□□□ -1.18
VRK3-223ENST00000601341 LINC00526Q96FQ7 95 aa7.66□□□□□ -1.18
VRK3-223ENST00000601341 PDE6GP18545 87 aa7.65□□□□□ -1.18
VRK3-223ENST00000601341 LINC00846Q9NV44 126 aa7.65□□□□□ -1.18
VRK3-223ENST00000601341 CAMK2N2Q96S95 79 aa7.64□□□□□ -1.19
VRK3-223ENST00000601341 LOC110117498A0A087WWA1 95 aa7.64□□□□□ -1.19
VRK3-223ENST00000601341 Q6ZRN7 208 aaPredicted RBP7.64□□□□□ -1.19
VRK3-223ENST00000601341 DIRC1Q969H9 104 aa7.64□□□□□ -1.19
VRK3-223ENST00000601341 RPL18AQ02543 176 aaKnown RBP7.63□□□□□ -1.19
VRK3-223ENST00000601341 TRAV23DV6A0A075B6W5 121 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms