RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 CIRBPQ14011 172 aaKnown RBP14.59□□□□□ -0.07
IRF3-227ENST00000600911 SPANXB1Q9NS25 103 aaPredicted RBP14.59□□□□□ -0.07
IRF3-227ENST00000600911 LINC00308Q8TCZ7 52 aa14.58□□□□□ -0.08
IRF3-227ENST00000600911 LINC00587B1AMM8 73 aa14.57□□□□□ -0.08
IRF3-227ENST00000600911 APOBP04114 4563 aaKnown RBP14.57□□□□□ -0.08
IRF3-227ENST00000600911 MUSTN1Q8IVN3 82 aa14.56□□□□□ -0.08
IRF3-227ENST00000600911 TSTD3H0UI37 97 aa14.55□□□□□ -0.08
IRF3-227ENST00000600911 HNRNPA3P51991 378 aaKnown RBP14.55□□□□□ -0.08
IRF3-227ENST00000600911 A0A1W2PNN7 141 aa14.55□□□□□ -0.08
IRF3-227ENST00000600911 SERTAD4-AS1Q5TG53 156 aa14.55□□□□□ -0.08
IRF3-227ENST00000600911 SPACA4Q8TDM5 124 aa14.55□□□□□ -0.08
IRF3-227ENST00000600911 HAMPP81172 84 aa14.54□□□□□ -0.08
IRF3-227ENST00000600911 SRSF9Q13242 221 aaKnown RBP eCLIP14.53□□□□□ -0.08
IRF3-227ENST00000600911 LOC107984156A0A0G2JMH3 177 aa14.52□□□□□ -0.08
IRF3-227ENST00000600911 ARL17AQ8IVW1 177 aa14.52□□□□□ -0.08
IRF3-227ENST00000600911 HIST1H4GQ99525 98 aa14.52□□□□□ -0.08
IRF3-227ENST00000600911 PRR3P79522 188 aaKnown RBP14.52□□□□□ -0.09
IRF3-227ENST00000600911 Q6ZSA8 131 aa14.51□□□□□ -0.09
IRF3-227ENST00000600911 CTAG1AP78358 180 aa14.5□□□□□ -0.09
IRF3-227ENST00000600911 VPREB1P12018 145 aa14.48□□□□□ -0.09
IRF3-227ENST00000600911 FAM19A5Q7Z5A7 132 aaPredicted RBP14.48□□□□□ -0.09
IRF3-227ENST00000600911 A0A087WYN8 130 aa14.48□□□□□ -0.09
IRF3-227ENST00000600911 DDTP30046 118 aa14.48□□□□□ -0.09
IRF3-227ENST00000600911 Q6ZVH6 145 aa14.48□□□□□ -0.09
IRF3-227ENST00000600911 IFITM1P13164 125 aa14.46□□□□□ -0.09
IRF3-227ENST00000600911 FXYD2P54710 66 aa14.46□□□□□ -0.09
IRF3-227ENST00000600911 CEND1Q8N111 149 aa14.46□□□□□ -0.09
IRF3-227ENST00000600911 HSD52Q0P140 79 aa14.45□□□□□ -0.1
IRF3-227ENST00000600911 IGKV2-28A0A075B6P5 120 aa14.44□□□□□ -0.1
IRF3-227ENST00000600911 A4D1N5 150 aa14.44□□□□□ -0.1
IRF3-227ENST00000600911 IGKV2D-28P01615 120 aa14.44□□□□□ -0.1
IRF3-227ENST00000600911 TAL2Q16559 108 aa14.44□□□□□ -0.1
IRF3-227ENST00000600911 PKIGQ9Y2B9 76 aa14.44□□□□□ -0.1
IRF3-227ENST00000600911 NCR3O14931 201 aa14.44□□□□□ -0.1
IRF3-227ENST00000600911 PLA2G2DQ9UNK4 145 aa14.44□□□□□ -0.1
IRF3-227ENST00000600911 PCP4L1A6NKN8 68 aa14.43□□□□□ -0.1
IRF3-227ENST00000600911 SCXQ7RTU7 201 aa14.43□□□□□ -0.1
IRF3-227ENST00000600911 CIRBP-AS1Q8TBR5 109 aa14.43□□□□□ -0.1
IRF3-227ENST00000600911 EPM2AB3EWF7 344 aa14.42□□□□□ -0.1
IRF3-227ENST00000600911 DPH3Q96FX2 82 aa14.42□□□□□ -0.1
IRF3-227ENST00000600911 LINC00474Q9P2X8 69 aa14.42□□□□□ -0.1
IRF3-227ENST00000600911 PHF5AQ7RTV0 110 aaKnown RBP14.41□□□□□ -0.1
IRF3-227ENST00000600911 PPDPFQ9H3Y8 114 aa14.41□□□□□ -0.1
IRF3-227ENST00000600911 PLAC8Q9NZF1 115 aa14.41□□□□□ -0.1
IRF3-227ENST00000600911 C22orf24Q9Y442 160 aa14.41□□□□□ -0.1
IRF3-227ENST00000600911 IGLV5-37A0A075B6J1 123 aa14.4□□□□□ -0.1
IRF3-227ENST00000600911 HINT1P49773 126 aaPredicted RBP14.4□□□□□ -0.1
IRF3-227ENST00000600911 KRTAP11-1Q8IUC1 163 aa14.4□□□□□ -0.1
IRF3-227ENST00000600911 XGP55808 180 aa14.39□□□□□ -0.11
IRF3-227ENST00000600911 M0QXV9 152 aa14.38□□□□□ -0.11
IRF3-227ENST00000600911 NDUFC2O95298 119 aa14.38□□□□□ -0.11
IRF3-227ENST00000600911 BVES-AS1Q5T3Y7 98 aa14.38□□□□□ -0.11
IRF3-227ENST00000600911 LINC00337Q8N6G1 96 aa14.38□□□□□ -0.11
IRF3-227ENST00000600911 GAGE10A6NGK3 116 aa14.37□□□□□ -0.11
IRF3-227ENST00000600911 C7orf33Q8WU49 177 aa14.37□□□□□ -0.11
IRF3-227ENST00000600911 RPL24P83731 157 aaKnown RBP14.37□□□□□ -0.11
IRF3-227ENST00000600911 CFC1BP0CG36 223 aa14.35□□□□□ -0.11
IRF3-227ENST00000600911 CFC1P0CG37 223 aa14.35□□□□□ -0.11
IRF3-227ENST00000600911 RYR1P21817 5038 aa14.35□□□□□ -0.11
IRF3-227ENST00000600911 LINC00167Q96N53 147 aa14.34□□□□□ -0.11
IRF3-227ENST00000600911 HSPG2P98160 4391 aa14.34□□□□□ -0.11
IRF3-227ENST00000600911 NKAPP1Q8N9T2 125 aa14.33□□□□□ -0.11
IRF3-227ENST00000600911 COPS9Q8WXC6 57 aa14.33□□□□□ -0.11
IRF3-227ENST00000600911 KIAA1109Q2LD37 5005 aa14.33□□□□□ -0.12
IRF3-227ENST00000600911 MRPL55Q7Z7F7 128 aaKnown RBP14.33□□□□□ -0.12
IRF3-227ENST00000600911 RPL37AP8A6NKH3 93 aa14.32□□□□□ -0.12
IRF3-227ENST00000600911 K7ERJ3 54 aa14.32□□□□□ -0.12
IRF3-227ENST00000600911 M0R378 163 aa14.31□□□□□ -0.12
IRF3-227ENST00000600911 NHP2Q9NX24 153 aaKnown RBP14.31□□□□□ -0.12
IRF3-227ENST00000600911 TRBV10-3A0A0K0K1G6 114 aa14.3□□□□□ -0.12
IRF3-227ENST00000600911 FAT1Q14517 4588 aa14.3□□□□□ -0.12
IRF3-227ENST00000600911 TRBV10-2A0A0K0K1G8 114 aa14.3□□□□□ -0.12
IRF3-227ENST00000600911 BATFQ16520 125 aa14.28□□□□□ -0.12
IRF3-227ENST00000600911 IGLV6-57P01721 117 aa14.27□□□□□ -0.12
IRF3-227ENST00000600911 IGLV1-50A0A075B6I6 118 aa14.26□□□□□ -0.13
IRF3-227ENST00000600911 A0A1B0GWB2 263 aa14.26□□□□□ -0.13
IRF3-227ENST00000600911 OR13C6PQ8NH95 151 aa14.26□□□□□ -0.13
IRF3-227ENST00000600911 SNHG12Q9BXW3 62 aa14.26□□□□□ -0.13
IRF3-227ENST00000600911 BIRC6Q9NR09 4857 aa14.26□□□□□ -0.13
IRF3-227ENST00000600911 A0A0B4J2C4 111 aa14.26□□□□□ -0.13
IRF3-227ENST00000600911 A6NDN8 102 aa14.25□□□□□ -0.13
IRF3-227ENST00000600911 M0R143 59 aa14.25□□□□□ -0.13
IRF3-227ENST00000600911 TMEM238LA0A1B0GVL6 79 aa14.24□□□□□ -0.13
IRF3-227ENST00000600911 A6NJY4 79 aa14.24□□□□□ -0.13
IRF3-227ENST00000600911 KRTAP17-1Q9BYP8 105 aa14.24□□□□□ -0.13
IRF3-227ENST00000600911 SMR3BP02814 79 aaPredicted RBP14.23□□□□□ -0.13
IRF3-227ENST00000600911 RPL13AP40429 203 aaKnown RBP14.23□□□□□ -0.13
IRF3-227ENST00000600911 VPS13BQ7Z7G8 4022 aa14.23□□□□□ -0.13
IRF3-227ENST00000600911 S100A7L2Q5SY68 101 aa14.23□□□□□ -0.13
IRF3-227ENST00000600911 UBE2BP63146 152 aa14.22□□□□□ -0.13
IRF3-227ENST00000600911 LBHQ53QV2 105 aaPredicted RBP14.21□□□□□ -0.13
IRF3-227ENST00000600911 RAB37Q96AX2 223 aa14.21□□□□□ -0.13
IRF3-227ENST00000600911 TRAV13-2A0A0B4J235 113 aa14.2□□□□□ -0.14
IRF3-227ENST00000600911 H7C2G1 150 aa14.19□□□□□ -0.14
IRF3-227ENST00000600911 TMEM126AQ9H061 195 aa14.19□□□□□ -0.14
IRF3-227ENST00000600911 PRO1854Q9UHT4 67 aa14.19□□□□□ -0.14
IRF3-227ENST00000600911 SMIM11BQ8TCY0 68 aa14.18□□□□□ -0.14
IRF3-227ENST00000600911 KCNQ1DNQ9H478 68 aa14.18□□□□□ -0.14
IRF3-227ENST00000600911 CDK2AP2O75956 126 aa14.17□□□□□ -0.14
IRF3-227ENST00000600911 PSORS1C2Q9UIG4 136 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms