RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 C2orf91Q6ZV80 131 aa12.97□□□□□ -0.33
PNKP-215ENST00000600910 MIEN1Q9BRT3 115 aa12.96□□□□□ -0.33
PNKP-215ENST00000600910 SPANXB1Q9NS25 103 aaPredicted RBP12.96□□□□□ -0.33
PNKP-215ENST00000600910 A0A087WYN8 130 aa12.95□□□□□ -0.34
PNKP-215ENST00000600910 A0A1W2PNN7 141 aa12.95□□□□□ -0.34
PNKP-215ENST00000600910 EIF4EBP3O60516 100 aaPredicted RBP12.95□□□□□ -0.34
PNKP-215ENST00000600910 SOSTDC1Q6X4U4 206 aa12.95□□□□□ -0.34
PNKP-215ENST00000600910 HIGD1BQ9P298 99 aa12.95□□□□□ -0.34
PNKP-215ENST00000600910 SRSF9Q13242 221 aaKnown RBP eCLIP12.95□□□□□ -0.34
PNKP-215ENST00000600910 Q6ZVH6 145 aa12.95□□□□□ -0.34
PNKP-215ENST00000600910 LINC00308Q8TCZ7 52 aa12.95□□□□□ -0.34
PNKP-215ENST00000600910 LOC107984156A0A0G2JMH3 177 aa12.94□□□□□ -0.34
PNKP-215ENST00000600910 HAMPP81172 84 aa12.94□□□□□ -0.34
PNKP-215ENST00000600910 SERTAD4-AS1Q5TG53 156 aa12.94□□□□□ -0.34
PNKP-215ENST00000600910 FAM19A5Q7Z5A7 132 aaPredicted RBP12.94□□□□□ -0.34
PNKP-215ENST00000600910 ARL17AQ8IVW1 177 aa12.94□□□□□ -0.34
PNKP-215ENST00000600910 SCXQ7RTU7 201 aa12.93□□□□□ -0.34
PNKP-215ENST00000600910 KRTAP7-1Q8IUC3 87 aa12.93□□□□□ -0.34
PNKP-215ENST00000600910 CIRBP-AS1Q8TBR5 109 aa12.93□□□□□ -0.34
PNKP-215ENST00000600910 Q8NDZ9 215 aa12.92□□□□□ -0.34
PNKP-215ENST00000600910 PLAC8Q9NZF1 115 aa12.91□□□□□ -0.34
PNKP-215ENST00000600910 PLA2G2DQ9UNK4 145 aa12.91□□□□□ -0.34
PNKP-215ENST00000600910 MUSTN1Q8IVN3 82 aa12.91□□□□□ -0.34
PNKP-215ENST00000600910 HIST1H4GQ99525 98 aa12.91□□□□□ -0.34
PNKP-215ENST00000600910 IFITM1P13164 125 aa12.9□□□□□ -0.34
PNKP-215ENST00000600910 APOBP04114 4563 aaKnown RBP12.89□□□□□ -0.35
PNKP-215ENST00000600910 TSTD3H0UI37 97 aa12.89□□□□□ -0.35
PNKP-215ENST00000600910 VPREB1P12018 145 aa12.89□□□□□ -0.35
PNKP-215ENST00000600910 XGP55808 180 aa12.89□□□□□ -0.35
PNKP-215ENST00000600910 RPL24P83731 157 aaKnown RBP12.89□□□□□ -0.35
PNKP-215ENST00000600910 COPS9Q8WXC6 57 aa12.89□□□□□ -0.35
PNKP-215ENST00000600910 EPM2AB3EWF7 344 aa12.88□□□□□ -0.35
PNKP-215ENST00000600910 HNRNPA3P51991 378 aaKnown RBP12.88□□□□□ -0.35
PNKP-215ENST00000600910 M0QXV9 152 aa12.87□□□□□ -0.35
PNKP-215ENST00000600910 C22orf24Q9Y442 160 aa12.87□□□□□ -0.35
PNKP-215ENST00000600910 IGLV5-37A0A075B6J1 123 aa12.86□□□□□ -0.35
PNKP-215ENST00000600910 PRR3P79522 188 aaKnown RBP12.86□□□□□ -0.35
PNKP-215ENST00000600910 NKAPP1Q8N9T2 125 aa12.86□□□□□ -0.35
PNKP-215ENST00000600910 PPDPFQ9H3Y8 114 aa12.86□□□□□ -0.35
PNKP-215ENST00000600910 NDUFC2O95298 119 aa12.85□□□□□ -0.35
PNKP-215ENST00000600910 NCR3O14931 201 aa12.84□□□□□ -0.35
PNKP-215ENST00000600910 PHF5AQ7RTV0 110 aaKnown RBP12.84□□□□□ -0.35
PNKP-215ENST00000600910 TAL2Q16559 108 aa12.84□□□□□ -0.35
PNKP-215ENST00000600910 CDK2AP2O75956 126 aa12.83□□□□□ -0.36
PNKP-215ENST00000600910 MRPL55Q7Z7F7 128 aaKnown RBP12.83□□□□□ -0.36
PNKP-215ENST00000600910 HSD52Q0P140 79 aa12.81□□□□□ -0.36
PNKP-215ENST00000600910 CEND1Q8N111 149 aa12.81□□□□□ -0.36
PNKP-215ENST00000600910 A4D1N5 150 aa12.8□□□□□ -0.36
PNKP-215ENST00000600910 GAGE10A6NGK3 116 aa12.8□□□□□ -0.36
PNKP-215ENST00000600910 C7orf33Q8WU49 177 aa12.8□□□□□ -0.36
PNKP-215ENST00000600910 IGKV2-28A0A075B6P5 120 aa12.8□□□□□ -0.36
PNKP-215ENST00000600910 M0R378 163 aa12.8□□□□□ -0.36
PNKP-215ENST00000600910 IGKV2D-28P01615 120 aa12.8□□□□□ -0.36
PNKP-215ENST00000600910 LINC00167Q96N53 147 aa12.8□□□□□ -0.36
PNKP-215ENST00000600910 LBHQ53QV2 105 aaPredicted RBP12.79□□□□□ -0.36
PNKP-215ENST00000600910 TRBV10-2A0A0K0K1G8 114 aa12.78□□□□□ -0.36
PNKP-215ENST00000600910 RPL37AP8A6NKH3 93 aa12.77□□□□□ -0.37
PNKP-215ENST00000600910 CTAG1AP78358 180 aa12.77□□□□□ -0.37
PNKP-215ENST00000600910 FXYD2P54710 66 aa12.76□□□□□ -0.37
PNKP-215ENST00000600910 UBE2BP63146 152 aa12.76□□□□□ -0.37
PNKP-215ENST00000600910 SMR3BP02814 79 aaPredicted RBP12.75□□□□□ -0.37
PNKP-215ENST00000600910 DDTP30046 118 aa12.74□□□□□ -0.37
PNKP-215ENST00000600910 KRTAP11-1Q8IUC1 163 aa12.74□□□□□ -0.37
PNKP-215ENST00000600910 LINC00337Q8N6G1 96 aa12.74□□□□□ -0.37
PNKP-215ENST00000600910 BIRC6Q9NR09 4857 aa12.74□□□□□ -0.37
PNKP-215ENST00000600910 RYR1P21817 5038 aa12.74□□□□□ -0.37
PNKP-215ENST00000600910 S100A7L2Q5SY68 101 aa12.73□□□□□ -0.37
PNKP-215ENST00000600910 HSPG2P98160 4391 aa12.73□□□□□ -0.37
PNKP-215ENST00000600910 KIAA1109Q2LD37 5005 aa12.73□□□□□ -0.37
PNKP-215ENST00000600910 IGLV1-50A0A075B6I6 118 aa12.73□□□□□ -0.37
PNKP-215ENST00000600910 TRBV10-3A0A0K0K1G6 114 aa12.73□□□□□ -0.37
PNKP-215ENST00000600910 OR13C6PQ8NH95 151 aa12.73□□□□□ -0.37
PNKP-215ENST00000600910 TMEM238LA0A1B0GVL6 79 aa12.72□□□□□ -0.37
PNKP-215ENST00000600910 A6NJY4 79 aa12.72□□□□□ -0.37
PNKP-215ENST00000600910 IGLV6-57P01721 117 aa12.71□□□□□ -0.37
PNKP-215ENST00000600910 LINC00528Q8N1L1 170 aa12.7□□□□□ -0.38
PNKP-215ENST00000600910 A6NDN8 102 aa12.7□□□□□ -0.38
PNKP-215ENST00000600910 CFC1BP0CG36 223 aa12.7□□□□□ -0.38
PNKP-215ENST00000600910 CFC1P0CG37 223 aa12.7□□□□□ -0.38
PNKP-215ENST00000600910 TMEM126AQ9H061 195 aa12.7□□□□□ -0.38
PNKP-215ENST00000600910 TRAV13-2A0A0B4J235 113 aa12.69□□□□□ -0.38
PNKP-215ENST00000600910 HINT1P49773 126 aaPredicted RBP12.69□□□□□ -0.38
PNKP-215ENST00000600910 BVES-AS1Q5T3Y7 98 aa12.69□□□□□ -0.38
PNKP-215ENST00000600910 PSORS1C2Q9UIG4 136 aa12.68□□□□□ -0.38
PNKP-215ENST00000600910 A0A0B4J2C4 111 aa12.66□□□□□ -0.38
PNKP-215ENST00000600910 M0R143 59 aa12.66□□□□□ -0.38
PNKP-215ENST00000600910 RAB37Q96AX2 223 aa12.66□□□□□ -0.38
PNKP-215ENST00000600910 NHP2Q9NX24 153 aaKnown RBP12.66□□□□□ -0.38
PNKP-215ENST00000600910 KCNQ1DNQ9H478 68 aa12.66□□□□□ -0.38
PNKP-215ENST00000600910 FAT1Q14517 4588 aa12.65□□□□□ -0.38
PNKP-215ENST00000600910 TRAV23DV6A0A075B6W5 121 aa12.64□□□□□ -0.39
PNKP-215ENST00000600910 PRYO14603 147 aa12.64□□□□□ -0.39
PNKP-215ENST00000600910 PCP4L1A6NKN8 68 aa12.63□□□□□ -0.39
PNKP-215ENST00000600910 RPL13AP40429 203 aaKnown RBP12.63□□□□□ -0.39
PNKP-215ENST00000600910 REG3GQ6UW15 175 aa12.63□□□□□ -0.39
PNKP-215ENST00000600910 VPS13BQ7Z7G8 4022 aa12.63□□□□□ -0.39
PNKP-215ENST00000600910 RPL37AP61513 92 aaKnown RBP12.62□□□□□ -0.39
PNKP-215ENST00000600910 C1orf137Q5JT78 98 aa12.62□□□□□ -0.39
PNKP-215ENST00000600910 K7ERJ3 54 aa12.62□□□□□ -0.39
PNKP-215ENST00000600910 A0A1B0GWB2 263 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms