RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 LOC107984156A0A0G2JMH3 177 aa10.35□□□□□ -0.75
SHKBP1-219ENST00000599575 A0A0J9YXY3 114 aa10.35□□□□□ -0.75
SHKBP1-219ENST00000599575 RPL37AP61513 92 aaKnown RBP10.35□□□□□ -0.75
SHKBP1-219ENST00000599575 ANKRD39Q53RE8 183 aa10.35□□□□□ -0.75
SHKBP1-219ENST00000599575 ARL17AQ8IVW1 177 aa10.35□□□□□ -0.75
SHKBP1-219ENST00000599575 MIR7-3HGQ8N6C7 128 aa10.35□□□□□ -0.75
SHKBP1-219ENST00000599575 JOSD1Q15040 202 aaPredicted RBP10.34□□□□□ -0.75
SHKBP1-219ENST00000599575 KRTAP7-1Q8IUC3 87 aa10.34□□□□□ -0.75
SHKBP1-219ENST00000599575 C22orf24Q9Y442 160 aa10.34□□□□□ -0.75
SHKBP1-219ENST00000599575 SERTAD4-AS1Q5TG53 156 aa10.33□□□□□ -0.76
SHKBP1-219ENST00000599575 NKAPP1Q8N9T2 125 aa10.33□□□□□ -0.76
SHKBP1-219ENST00000599575 A0A0U1RRA0 63 aa10.32□□□□□ -0.76
SHKBP1-219ENST00000599575 PHF5AQ7RTV0 110 aaKnown RBP10.32□□□□□ -0.76
SHKBP1-219ENST00000599575 MRPL55Q7Z7F7 128 aaKnown RBP10.32□□□□□ -0.76
SHKBP1-219ENST00000599575 MIEN1Q9BRT3 115 aa10.31□□□□□ -0.76
SHKBP1-219ENST00000599575 KRTAP17-1Q9BYP8 105 aa10.31□□□□□ -0.76
SHKBP1-219ENST00000599575 VPREB1P12018 145 aa10.3□□□□□ -0.76
SHKBP1-219ENST00000599575 UBE2BP63146 152 aa10.3□□□□□ -0.76
SHKBP1-219ENST00000599575 SCGB1D4Q6XE38 83 aa10.3□□□□□ -0.76
SHKBP1-219ENST00000599575 TMEM238C9JI98 176 aa10.29□□□□□ -0.76
SHKBP1-219ENST00000599575 KRTAP10-4P60372 401 aaPredicted RBP10.29□□□□□ -0.76
SHKBP1-219ENST00000599575 PRR3P79522 188 aaKnown RBP10.29□□□□□ -0.76
SHKBP1-219ENST00000599575 Q6ZVH6 145 aa10.29□□□□□ -0.76
SHKBP1-219ENST00000599575 COPS9Q8WXC6 57 aa10.29□□□□□ -0.76
SHKBP1-219ENST00000599575 BOD1L2Q8IYS8 172 aa10.28□□□□□ -0.76
SHKBP1-219ENST00000599575 PPDPFQ9H3Y8 114 aa10.28□□□□□ -0.76
SHKBP1-219ENST00000599575 NDUFC2O95298 119 aa10.27□□□□□ -0.77
SHKBP1-219ENST00000599575 PCP2Q8IVA1 136 aa10.27□□□□□ -0.77
SHKBP1-219ENST00000599575 LITAFQ99732 161 aa10.27□□□□□ -0.77
SHKBP1-219ENST00000599575 TTTY13Q9BZ97 58 aa10.27□□□□□ -0.77
SHKBP1-219ENST00000599575 PSORS1C2Q9UIG4 136 aa10.27□□□□□ -0.77
SHKBP1-219ENST00000599575 M0R378 163 aa10.26□□□□□ -0.77
SHKBP1-219ENST00000599575 ADAMTSL4-AS1Q5T5F5 129 aa10.26□□□□□ -0.77
SHKBP1-219ENST00000599575 LINC00167Q96N53 147 aa10.26□□□□□ -0.77
SHKBP1-219ENST00000599575 VPS13BQ7Z7G8 4022 aa10.26□□□□□ -0.77
SHKBP1-219ENST00000599575 TRBV10-2A0A0K0K1G8 114 aa10.25□□□□□ -0.77
SHKBP1-219ENST00000599575 DAND5Q8N907 189 aa10.25□□□□□ -0.77
SHKBP1-219ENST00000599575 VAMP8Q9BV40 100 aa10.25□□□□□ -0.77
SHKBP1-219ENST00000599575 SPANXDQ9BXN6 97 aa10.25□□□□□ -0.77
SHKBP1-219ENST00000599575 KRTAP4-5Q9BYR2 181 aa10.25□□□□□ -0.77
SHKBP1-219ENST00000599575 SPANXCQ9NY87 97 aa10.25□□□□□ -0.77
SHKBP1-219ENST00000599575 DLEU1O43261 78 aa10.24□□□□□ -0.77
SHKBP1-219ENST00000599575 IFITM1P13164 125 aa10.24□□□□□ -0.77
SHKBP1-219ENST00000599575 INAFM2P0DMQ5 153 aa10.23□□□□□ -0.77
SHKBP1-219ENST00000599575 COX8AP10176 69 aa10.23□□□□□ -0.77
SHKBP1-219ENST00000599575 LINC00308Q8TCZ7 52 aa10.23□□□□□ -0.77
SHKBP1-219ENST00000599575 SPANXB1Q9NS25 103 aaPredicted RBP10.23□□□□□ -0.77
SHKBP1-219ENST00000599575 IGLV1-50A0A075B6I6 118 aa10.22□□□□□ -0.77
SHKBP1-219ENST00000599575 PYY3Q5JQD4 70 aa10.22□□□□□ -0.77
SHKBP1-219ENST00000599575 C1orf137Q5JT78 98 aa10.22□□□□□ -0.77
SHKBP1-219ENST00000599575 S100A12P80511 92 aa10.21□□□□□ -0.77
SHKBP1-219ENST00000599575 Q8NDZ9 215 aa10.21□□□□□ -0.77
SHKBP1-219ENST00000599575 ABCA13Q86UQ4 5058 aa10.21□□□□□ -0.78
SHKBP1-219ENST00000599575 GAGE10A6NGK3 116 aa10.2□□□□□ -0.78
SHKBP1-219ENST00000599575 SPATA45Q537H7 98 aa10.2□□□□□ -0.78
SHKBP1-219ENST00000599575 SPINK6Q6UWN8 80 aa10.2□□□□□ -0.78
SHKBP1-219ENST00000599575 PAM16Q9Y3D7 125 aa10.2□□□□□ -0.78
SHKBP1-219ENST00000599575 CBY1Q9Y3M2 126 aa10.2□□□□□ -0.78
SHKBP1-219ENST00000599575 RPL37AP8A6NKH3 93 aa10.19□□□□□ -0.78
SHKBP1-219ENST00000599575 SOSTDC1Q6X4U4 206 aa10.19□□□□□ -0.78
SHKBP1-219ENST00000599575 KRTAP11-1Q8IUC1 163 aa10.19□□□□□ -0.78
SHKBP1-219ENST00000599575 LINC00518Q8N0U6 118 aa10.19□□□□□ -0.78
SHKBP1-219ENST00000599575 BCE1O60756 84 aa10.18□□□□□ -0.78
SHKBP1-219ENST00000599575 IGLV7-43P04211 117 aa10.18□□□□□ -0.78
SHKBP1-219ENST00000599575 SRSF9Q13242 221 aaKnown RBP eCLIP10.18□□□□□ -0.78
SHKBP1-219ENST00000599575 IGKV2-28A0A075B6P5 120 aa10.17□□□□□ -0.78
SHKBP1-219ENST00000599575 IGKV2D-28P01615 120 aa10.17□□□□□ -0.78
SHKBP1-219ENST00000599575 NPC2P61916 151 aa10.16□□□□□ -0.78
SHKBP1-219ENST00000599575 SLC25A34Q6PIV7 304 aa10.16□□□□□ -0.78
SHKBP1-219ENST00000599575 KCNQ1DNQ9H478 68 aa10.16□□□□□ -0.78
SHKBP1-219ENST00000599575 PCLOQ9Y6V0 5065 aa10.15□□□□□ -0.78
SHKBP1-219ENST00000599575 PRYO14603 147 aa10.15□□□□□ -0.78
SHKBP1-219ENST00000599575 NCR3O14931 201 aa10.15□□□□□ -0.78
SHKBP1-219ENST00000599575 EIF4EBP3O60516 100 aaPredicted RBP10.15□□□□□ -0.78
SHKBP1-219ENST00000599575 REG3GQ6UW15 175 aa10.15□□□□□ -0.78
SHKBP1-219ENST00000599575 TMEM126AQ9H061 195 aa10.15□□□□□ -0.78
SHKBP1-219ENST00000599575 HIGD1BQ9P298 99 aa10.15□□□□□ -0.78
SHKBP1-219ENST00000599575 ZNF861PO60384 105 aa10.14□□□□□ -0.79
SHKBP1-219ENST00000599575 DDTP30046 118 aa10.14□□□□□ -0.79
SHKBP1-219ENST00000599575 RPL28P46779 137 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-219ENST00000599575 S100A7L2Q5SY68 101 aa10.14□□□□□ -0.79
SHKBP1-219ENST00000599575 DIRC1Q969H9 104 aa10.14□□□□□ -0.79
SHKBP1-219ENST00000599575 IGLV6-57P01721 117 aa10.13□□□□□ -0.79
SHKBP1-219ENST00000599575 HNRNPA3P51991 378 aaKnown RBP10.13□□□□□ -0.79
SHKBP1-219ENST00000599575 C14orf144Q96I85 54 aa10.13□□□□□ -0.79
SHKBP1-219ENST00000599575 TRBV10-3A0A0K0K1G6 114 aa10.12□□□□□ -0.79
SHKBP1-219ENST00000599575 MUSTN1Q8IVN3 82 aa10.12□□□□□ -0.79
SHKBP1-219ENST00000599575 H0Y9J4 135 aa10.11□□□□□ -0.79
SHKBP1-219ENST00000599575 SPRR1AP35321 89 aa10.11□□□□□ -0.79
SHKBP1-219ENST00000599575 LINC00337Q8N6G1 96 aa10.11□□□□□ -0.79
SHKBP1-219ENST00000599575 OXTP01178 125 aa10.1□□□□□ -0.79
SHKBP1-219ENST00000599575 HIST1H4GQ99525 98 aa10.1□□□□□ -0.79
SHKBP1-219ENST00000599575 SMIM6P0DI80 62 aa10.09□□□□□ -0.79
SHKBP1-219ENST00000599575 UBE2AP49459 152 aa10.09□□□□□ -0.79
SHKBP1-219ENST00000599575 KRTAP13-1Q8IUC0 172 aa10.08□□□□□ -0.8
SHKBP1-219ENST00000599575 TRAV23DV6A0A075B6W5 121 aa10.07□□□□□ -0.8
SHKBP1-219ENST00000599575 TRAV13-2A0A0B4J235 113 aa10.07□□□□□ -0.8
SHKBP1-219ENST00000599575 TAL2Q16559 108 aa10.07□□□□□ -0.8
SHKBP1-219ENST00000599575 FAM19A1Q7Z5A9 133 aa10.07□□□□□ -0.8
SHKBP1-219ENST00000599575 MYCBP2O75592 4640 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms