RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 E9PLD3 99 aa10.06□□□□□ -0.8
SHKBP1-215ENST00000597649 GAGE2BQ13066 116 aa10.06□□□□□ -0.8
SHKBP1-215ENST00000597649 C9orf116Q5BN46 136 aaPredicted RBP10.06□□□□□ -0.8
SHKBP1-215ENST00000597649 NDUFA12Q9UI09 145 aa10.06□□□□□ -0.8
SHKBP1-215ENST00000597649 MYMXA0A1B0GTQ4 84 aa10.05□□□□□ -0.8
SHKBP1-215ENST00000597649 PTTG1IPP53801 180 aa10.05□□□□□ -0.8
SHKBP1-215ENST00000597649 ZNF625Q96I27 306 aaPredicted RBP10.05□□□□□ -0.8
SHKBP1-215ENST00000597649 PSORS1C2Q9UIG4 136 aa10.04□□□□□ -0.8
SHKBP1-215ENST00000597649 NDUFC2-KCTD14E9PQ53 114 aa10.03□□□□□ -0.8
SHKBP1-215ENST00000597649 TLX1NBP0CAT3 122 aa10.03□□□□□ -0.8
SHKBP1-215ENST00000597649 NMUP48645 174 aa10.03□□□□□ -0.8
SHKBP1-215ENST00000597649 HERV-K104P63124 156 aa10.03□□□□□ -0.8
SHKBP1-215ENST00000597649 GAGE2EQ4V326 116 aa10.03□□□□□ -0.8
SHKBP1-215ENST00000597649 GAGE2DQ9UEU5 116 aa10.03□□□□□ -0.8
SHKBP1-215ENST00000597649 PFN2P35080 140 aa10.02□□□□□ -0.81
SHKBP1-215ENST00000597649 TSPEAR-AS2P59090 65 aa10.02□□□□□ -0.81
SHKBP1-215ENST00000597649 MEIG1Q5JSS6 88 aa10.02□□□□□ -0.81
SHKBP1-215ENST00000597649 ERG28Q9UKR5 140 aa10.02□□□□□ -0.81
SHKBP1-215ENST00000597649 FAT4Q6V0I7 4981 aa10.01□□□□□ -0.81
SHKBP1-215ENST00000597649 LINC00587B1AMM8 73 aa10.01□□□□□ -0.81
SHKBP1-215ENST00000597649 LINC00158P58513 81 aa10□□□□□ -0.81
SHKBP1-215ENST00000597649 COX17Q14061 63 aa10□□□□□ -0.81
SHKBP1-215ENST00000597649 ANKRD39Q53RE8 183 aa10□□□□□ -0.81
SHKBP1-215ENST00000597649 PRR26Q8N8Z3 221 aa10□□□□□ -0.81
SHKBP1-215ENST00000597649 IGKV2D-26A0A0A0MRZ7 120 aa9.99□□□□□ -0.81
SHKBP1-215ENST00000597649 JOSD1Q15040 202 aaPredicted RBP9.99□□□□□ -0.81
SHKBP1-215ENST00000597649 PHF5AQ7RTV0 110 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-215ENST00000597649 A0A0U1RRA0 63 aa9.97□□□□□ -0.81
SHKBP1-215ENST00000597649 ZNF815PA8K554 130 aa9.97□□□□□ -0.81
SHKBP1-215ENST00000597649 C1orf137Q5JT78 98 aa9.97□□□□□ -0.81
SHKBP1-215ENST00000597649 KRTAP9-2Q9BYQ4 174 aa9.97□□□□□ -0.81
SHKBP1-215ENST00000597649 SMIM13P0DJ93 91 aa9.96□□□□□ -0.82
SHKBP1-215ENST00000597649 XAGE1AQ9HD64 81 aa9.96□□□□□ -0.82
SHKBP1-215ENST00000597649 KRTAP11-1Q8IUC1 163 aa9.95□□□□□ -0.82
SHKBP1-215ENST00000597649 TTTY13Q9BZ97 58 aa9.94□□□□□ -0.82
SHKBP1-215ENST00000597649 A0A0J9YXY3 114 aa9.93□□□□□ -0.82
SHKBP1-215ENST00000597649 SCGB1D4Q6XE38 83 aa9.93□□□□□ -0.82
SHKBP1-215ENST00000597649 VAMP8Q9BV40 100 aa9.93□□□□□ -0.82
SHKBP1-215ENST00000597649 IGLV7-43P04211 117 aa9.92□□□□□ -0.82
SHKBP1-215ENST00000597649 PYY3Q5JQD4 70 aa9.92□□□□□ -0.82
SHKBP1-215ENST00000597649 C9orf129Q5T035 196 aaKnown RBP9.92□□□□□ -0.82
SHKBP1-215ENST00000597649 PCP2Q8IVA1 136 aa9.92□□□□□ -0.82
SHKBP1-215ENST00000597649 SND1-IT1Q9HBX3 110 aa9.92□□□□□ -0.82
SHKBP1-215ENST00000597649 FAM19A5Q7Z5A7 132 aaPredicted RBP9.91□□□□□ -0.82
SHKBP1-215ENST00000597649 MIR7-3HGQ8N6C7 128 aa9.91□□□□□ -0.82
SHKBP1-215ENST00000597649 DIRC1Q969H9 104 aa9.91□□□□□ -0.82
SHKBP1-215ENST00000597649 PAM16Q9Y3D7 125 aa9.91□□□□□ -0.82
SHKBP1-215ENST00000597649 LOC105371267A0A1B0GV96 52 aa9.9□□□□□ -0.82
SHKBP1-215ENST00000597649 FAM168BA1KXE4 195 aa9.9□□□□□ -0.82
SHKBP1-215ENST00000597649 SPATA45Q537H7 98 aa9.9□□□□□ -0.82
SHKBP1-215ENST00000597649 H0Y9J4 135 aa9.89□□□□□ -0.83
SHKBP1-215ENST00000597649 KRTAP1-4P0C5Y4 121 aa9.89□□□□□ -0.83
SHKBP1-215ENST00000597649 TIMM17BO60830 172 aa9.88□□□□□ -0.83
SHKBP1-215ENST00000597649 DAND5Q8N907 189 aa9.88□□□□□ -0.83
SHKBP1-215ENST00000597649 MIEN1Q9BRT3 115 aa9.88□□□□□ -0.83
SHKBP1-215ENST00000597649 RPL24P83731 157 aaKnown RBP9.87□□□□□ -0.83
SHKBP1-215ENST00000597649 PRR4Q16378 134 aa9.87□□□□□ -0.83
SHKBP1-215ENST00000597649 TMEM238C9JI98 176 aa9.86□□□□□ -0.83
SHKBP1-215ENST00000597649 S100A12P80511 92 aa9.86□□□□□ -0.83
SHKBP1-215ENST00000597649 NKAPP1Q8N9T2 125 aa9.86□□□□□ -0.83
SHKBP1-215ENST00000597649 IGLV1-50A0A075B6I6 118 aa9.85□□□□□ -0.83
SHKBP1-215ENST00000597649 M0QXV9 152 aa9.85□□□□□ -0.83
SHKBP1-215ENST00000597649 COX8AP10176 69 aa9.85□□□□□ -0.83
SHKBP1-215ENST00000597649 ADAMTSL4-AS1Q5T5F5 129 aa9.85□□□□□ -0.83
SHKBP1-215ENST00000597649 KRTAP7-1Q8IUC3 87 aa9.85□□□□□ -0.83
SHKBP1-215ENST00000597649 BOD1L2Q8IYS8 172 aa9.85□□□□□ -0.83
SHKBP1-215ENST00000597649 NPC2P61916 151 aa9.84□□□□□ -0.83
SHKBP1-215ENST00000597649 LBHQ53QV2 105 aaPredicted RBP9.84□□□□□ -0.83
SHKBP1-215ENST00000597649 C14orf144Q96I85 54 aa9.84□□□□□ -0.83
SHKBP1-215ENST00000597649 C22orf24Q9Y442 160 aa9.84□□□□□ -0.83
SHKBP1-215ENST00000597649 LITAFQ99732 161 aa9.83□□□□□ -0.84
SHKBP1-215ENST00000597649 UBE2BP63146 152 aa9.82□□□□□ -0.84
SHKBP1-215ENST00000597649 LCE2AQ5TA79 106 aaPredicted RBP9.82□□□□□ -0.84
SHKBP1-215ENST00000597649 SLC25A34Q6PIV7 304 aa9.82□□□□□ -0.84
SHKBP1-215ENST00000597649 COPS9Q8WXC6 57 aa9.82□□□□□ -0.84
SHKBP1-215ENST00000597649 DLEU1O43261 78 aa9.81□□□□□ -0.84
SHKBP1-215ENST00000597649 VPREB1P12018 145 aa9.81□□□□□ -0.84
SHKBP1-215ENST00000597649 MRPL55Q7Z7F7 128 aaKnown RBP9.81□□□□□ -0.84
SHKBP1-215ENST00000597649 SPANXDQ9BXN6 97 aa9.81□□□□□ -0.84
SHKBP1-215ENST00000597649 SPANXCQ9NY87 97 aa9.81□□□□□ -0.84
SHKBP1-215ENST00000597649 TP73-AS1Q9UF72 201 aa9.81□□□□□ -0.84
SHKBP1-215ENST00000597649 IGLV5-37A0A075B6J1 123 aa9.8□□□□□ -0.84
SHKBP1-215ENST00000597649 LOC107984156A0A0G2JMH3 177 aa9.8□□□□□ -0.84
SHKBP1-215ENST00000597649 Q6ZVH6 145 aa9.8□□□□□ -0.84
SHKBP1-215ENST00000597649 ARL17AQ8IVW1 177 aa9.8□□□□□ -0.84
SHKBP1-215ENST00000597649 LINC00308Q8TCZ7 52 aa9.8□□□□□ -0.84
SHKBP1-215ENST00000597649 MUC17Q685J3 4493 aa9.79□□□□□ -0.84
SHKBP1-215ENST00000597649 GAGE10A6NGK3 116 aa9.79□□□□□ -0.84
SHKBP1-215ENST00000597649 SMIM6P0DI80 62 aa9.79□□□□□ -0.84
SHKBP1-215ENST00000597649 A0A0U1RQV1 116 aa9.78□□□□□ -0.84
SHKBP1-215ENST00000597649 NCR3O14931 201 aa9.78□□□□□ -0.84
SHKBP1-215ENST00000597649 IFITM1P13164 125 aa9.78□□□□□ -0.84
SHKBP1-215ENST00000597649 M0R378 163 aa9.77□□□□□ -0.85
SHKBP1-215ENST00000597649 SOSTDC1Q6X4U4 206 aa9.77□□□□□ -0.85
SHKBP1-215ENST00000597649 LINC00167Q96N53 147 aa9.77□□□□□ -0.85
SHKBP1-215ENST00000597649 SPANXB1Q9NS25 103 aaPredicted RBP9.77□□□□□ -0.85
SHKBP1-215ENST00000597649 KRTAP9-6A0A140TA67 174 aa9.76□□□□□ -0.85
SHKBP1-215ENST00000597649 RPL37AP8A6NKH3 93 aa9.76□□□□□ -0.85
SHKBP1-215ENST00000597649 NDUFC2O95298 119 aa9.76□□□□□ -0.85
SHKBP1-215ENST00000597649 MUSTN1Q8IVN3 82 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms