RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 BVES-AS1Q5T3Y7 98 aa8.49□□□□□ -1.05
SHKBP1-209ENST00000595803 CDK2AP2O75956 126 aa8.48□□□□□ -1.05
SHKBP1-209ENST00000595803 Q8N1X5 172 aa8.48□□□□□ -1.05
SHKBP1-209ENST00000595803 TMEM238LA0A1B0GVL6 79 aa8.47□□□□□ -1.05
SHKBP1-209ENST00000595803 A6NJY4 79 aa8.47□□□□□ -1.05
SHKBP1-209ENST00000595803 NDUFC2-KCTD14E9PQ53 114 aa8.47□□□□□ -1.05
SHKBP1-209ENST00000595803 LOC107984640A0A0U1RRK4 108 aa8.46□□□□□ -1.06
SHKBP1-209ENST00000595803 TLX1NBP0CAT3 122 aa8.46□□□□□ -1.06
SHKBP1-209ENST00000595803 FXYD2P54710 66 aa8.46□□□□□ -1.06
SHKBP1-209ENST00000595803 TNP2Q05952 138 aa8.46□□□□□ -1.06
SHKBP1-209ENST00000595803 GAGE2EQ4V326 116 aa8.46□□□□□ -1.06
SHKBP1-209ENST00000595803 SNHG12Q9BXW3 62 aa8.46□□□□□ -1.06
SHKBP1-209ENST00000595803 SND1-IT1Q9HBX3 110 aa8.46□□□□□ -1.06
SHKBP1-209ENST00000595803 GAGE2DQ9UEU5 116 aa8.46□□□□□ -1.06
SHKBP1-209ENST00000595803 A4D1N5 150 aa8.45□□□□□ -1.06
SHKBP1-209ENST00000595803 A6NDN8 102 aa8.45□□□□□ -1.06
SHKBP1-209ENST00000595803 RPL18AQ02543 176 aaKnown RBP8.45□□□□□ -1.06
SHKBP1-209ENST00000595803 SOSTDC1Q6X4U4 206 aa8.45□□□□□ -1.06
SHKBP1-209ENST00000595803 PPDPFQ9H3Y8 114 aa8.45□□□□□ -1.06
SHKBP1-209ENST00000595803 GAGE2BQ13066 116 aa8.44□□□□□ -1.06
SHKBP1-209ENST00000595803 Q6ZRP5 223 aa8.44□□□□□ -1.06
SHKBP1-209ENST00000595803 C9orf163Q8N9P6 203 aa8.44□□□□□ -1.06
SHKBP1-209ENST00000595803 PKIGQ9Y2B9 76 aa8.44□□□□□ -1.06
SHKBP1-209ENST00000595803 LOC107984156A0A0G2JMH3 177 aa8.43□□□□□ -1.06
SHKBP1-209ENST00000595803 EIF4EBP3O60516 100 aaPredicted RBP8.43□□□□□ -1.06
SHKBP1-209ENST00000595803 ARL17AQ8IVW1 177 aa8.43□□□□□ -1.06
SHKBP1-209ENST00000595803 XAGE1AQ9HD64 81 aa8.43□□□□□ -1.06
SHKBP1-209ENST00000595803 NHP2Q9NX24 153 aaKnown RBP8.43□□□□□ -1.06
SHKBP1-209ENST00000595803 IGLV5-52A0A0A0MRZ9 124 aa8.41□□□□□ -1.06
SHKBP1-209ENST00000595803 RAB37Q96AX2 223 aa8.41□□□□□ -1.06
SHKBP1-209ENST00000595803 CFC1BP0CG36 223 aa8.4□□□□□ -1.06
SHKBP1-209ENST00000595803 CFC1P0CG37 223 aa8.4□□□□□ -1.06
SHKBP1-209ENST00000595803 COL5A1-AS1Q5SY13 56 aa8.4□□□□□ -1.06
SHKBP1-209ENST00000595803 APOBP04114 4563 aaKnown RBP8.4□□□□□ -1.06
SHKBP1-209ENST00000595803 C16orf90A8MZG2 172 aa8.39□□□□□ -1.07
SHKBP1-209ENST00000595803 NDUFC2O95298 119 aa8.39□□□□□ -1.07
SHKBP1-209ENST00000595803 PGPEP1Q9NXJ5 209 aa8.39□□□□□ -1.07
SHKBP1-209ENST00000595803 A0A0B4J2C4 111 aa8.38□□□□□ -1.07
SHKBP1-209ENST00000595803 C9orf129Q5T035 196 aaKnown RBP8.38□□□□□ -1.07
SHKBP1-209ENST00000595803 SDIM1Q6ZPB5 146 aa8.38□□□□□ -1.07
SHKBP1-209ENST00000595803 PRO1854Q9UHT4 67 aa8.38□□□□□ -1.07
SHKBP1-209ENST00000595803 TRAV13-2A0A0B4J235 113 aa8.37□□□□□ -1.07
SHKBP1-209ENST00000595803 IGKV2-24A0A0C4DH68 120 aa8.37□□□□□ -1.07
SHKBP1-209ENST00000595803 A0A1B0GWB2 263 aa8.37□□□□□ -1.07
SHKBP1-209ENST00000595803 FUSP35637 526 aaKnown RBP eCLIP8.37□□□□□ -1.07
SHKBP1-209ENST00000595803 PRR3P79522 188 aaKnown RBP8.37□□□□□ -1.07
SHKBP1-209ENST00000595803 LINC01620Q4KN68 170 aa8.37□□□□□ -1.07
SHKBP1-209ENST00000595803 DPH3Q96FX2 82 aa8.37□□□□□ -1.07
SHKBP1-209ENST00000595803 LRP1BQ9NZR2 4599 aa8.37□□□□□ -1.07
SHKBP1-209ENST00000595803 A0A096LNI7 61 aa8.36□□□□□ -1.07
SHKBP1-209ENST00000595803 K7ERJ3 54 aa8.36□□□□□ -1.07
SHKBP1-209ENST00000595803 LBHQ53QV2 105 aaPredicted RBP8.36□□□□□ -1.07
SHKBP1-209ENST00000595803 OR13C6PQ8NH95 151 aa8.36□□□□□ -1.07
SHKBP1-209ENST00000595803 PLA2G2DQ9UNK4 145 aa8.36□□□□□ -1.07
SHKBP1-209ENST00000595803 MYCBP2O75592 4640 aa8.35□□□□□ -1.07
SHKBP1-209ENST00000595803 NCR3O14931 201 aa8.35□□□□□ -1.07
SHKBP1-209ENST00000595803 LINC00474Q9P2X8 69 aa8.35□□□□□ -1.07
SHKBP1-209ENST00000595803 IGKV2-28A0A075B6P5 120 aa8.34□□□□□ -1.07
SHKBP1-209ENST00000595803 H7C2G1 150 aa8.34□□□□□ -1.07
SHKBP1-209ENST00000595803 IGKV2D-28P01615 120 aa8.34□□□□□ -1.07
SHKBP1-209ENST00000595803 VPREB1P12018 145 aa8.34□□□□□ -1.07
SHKBP1-209ENST00000595803 NKAPP1Q8N9T2 125 aa8.34□□□□□ -1.07
SHKBP1-209ENST00000595803 Q8NDZ9 215 aa8.34□□□□□ -1.07
SHKBP1-209ENST00000595803 SRRM2Q9UQ35 2752 aaKnown RBP8.34□□□□□ -1.07
SHKBP1-209ENST00000595803 TRBV10-2A0A0K0K1G8 114 aa8.33□□□□□ -1.08
SHKBP1-209ENST00000595803 M0R378 163 aa8.33□□□□□ -1.08
SHKBP1-209ENST00000595803 TAX1BP3O14907 124 aa8.33□□□□□ -1.08
SHKBP1-209ENST00000595803 RPL13AP40429 203 aaKnown RBP8.33□□□□□ -1.08
SHKBP1-209ENST00000595803 KRTAP10-2P60368 255 aa8.33□□□□□ -1.08
SHKBP1-209ENST00000595803 S100A7L2Q5SY68 101 aa8.33□□□□□ -1.08
SHKBP1-209ENST00000595803 CHTF8P0CG12 524 aa8.32□□□□□ -1.08
SHKBP1-209ENST00000595803 Q1RN00 199 aa8.32□□□□□ -1.08
SHKBP1-209ENST00000595803 SERTAD4-AS1Q5TG53 156 aa8.32□□□□□ -1.08
SHKBP1-209ENST00000595803 LINC00337Q8N6G1 96 aa8.32□□□□□ -1.08
SHKBP1-209ENST00000595803 FAM168BA1KXE4 195 aa8.31□□□□□ -1.08
SHKBP1-209ENST00000595803 C9orf118A6NHY6 69 aa8.31□□□□□ -1.08
SHKBP1-209ENST00000595803 INAFM2P0DMQ5 153 aa8.31□□□□□ -1.08
SHKBP1-209ENST00000595803 FAM19A5Q7Z5A7 132 aaPredicted RBP8.31□□□□□ -1.08
SHKBP1-209ENST00000595803 TMEM126AQ9H061 195 aa8.31□□□□□ -1.08
SHKBP1-209ENST00000595803 IGLV5-37A0A075B6J1 123 aa8.3□□□□□ -1.08
SHKBP1-209ENST00000595803 A0A1W2PNN7 141 aa8.3□□□□□ -1.08
SHKBP1-209ENST00000595803 EPM2AB3EWF7 344 aa8.3□□□□□ -1.08
SHKBP1-209ENST00000595803 PSMB2P49721 201 aa8.3□□□□□ -1.08
SHKBP1-209ENST00000595803 C22orf24Q9Y442 160 aa8.3□□□□□ -1.08
SHKBP1-209ENST00000595803 TSPAN13O95857 204 aa8.29□□□□□ -1.08
SHKBP1-209ENST00000595803 H3BUT2 72 aa8.28□□□□□ -1.08
SHKBP1-209ENST00000595803 NAA38Q9BRA0 125 aaKnown RBP8.28□□□□□ -1.08
SHKBP1-209ENST00000595803 CBY1Q9Y3M2 126 aa8.28□□□□□ -1.08
SHKBP1-209ENST00000595803 GAGE10A6NGK3 116 aa8.27□□□□□ -1.09
SHKBP1-209ENST00000595803 SCGB1C2P0DMR2 95 aa8.27□□□□□ -1.09
SHKBP1-209ENST00000595803 KRTAP7-1Q8IUC3 87 aa8.27□□□□□ -1.09
SHKBP1-209ENST00000595803 SPACA4Q8TDM5 124 aa8.27□□□□□ -1.09
SHKBP1-209ENST00000595803 C7orf33Q8WU49 177 aa8.27□□□□□ -1.09
SHKBP1-209ENST00000595803 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.27□□□□□ -1.09
SHKBP1-209ENST00000595803 DNAH5Q8TE73 4624 aa8.26□□□□□ -1.09
SHKBP1-209ENST00000595803 TRBV10-3A0A0K0K1G6 114 aa8.26□□□□□ -1.09
SHKBP1-209ENST00000595803 PANO1I0J062 215 aa8.26□□□□□ -1.09
SHKBP1-209ENST00000595803 IGLV6-57P01721 117 aa8.26□□□□□ -1.09
SHKBP1-209ENST00000595803 MRPL55Q7Z7F7 128 aaKnown RBP8.26□□□□□ -1.09
SHKBP1-209ENST00000595803 SMIM11BQ8TCY0 68 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms