RNA–Protein interactions for RNA: ENST00000592860.2

CFD-202, Transcript of complement factor D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CFD, Length 809 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFD-202ENST00000592860 FAM19A1Q7Z5A9 133 aa13.49□□□□□ -0.25
CFD-202ENST00000592860 NDUFA5Q16718 116 aa13.47□□□□□ -0.25
CFD-202ENST00000592860 FAM229BQ4G0N7 80 aa13.47□□□□□ -0.25
CFD-202ENST00000592860 SFTA2Q6UW10 78 aa13.47□□□□□ -0.25
CFD-202ENST00000592860 TMEM223A0PJW6 202 aa13.46□□□□□ -0.25
CFD-202ENST00000592860 A0A0U1RRA0 63 aa13.45□□□□□ -0.26
CFD-202ENST00000592860 LINC00158P58513 81 aa13.45□□□□□ -0.26
CFD-202ENST00000592860 IFI27L1Q96BM0 104 aa13.45□□□□□ -0.26
CFD-202ENST00000592860 TRAV12-1A0A0B4J245 112 aa13.44□□□□□ -0.26
CFD-202ENST00000592860 CHCHD1Q96BP2 118 aaKnown RBP13.44□□□□□ -0.26
CFD-202ENST00000592860 LINC00304Q8N9R0 145 aa13.41□□□□□ -0.26
CFD-202ENST00000592860 PLEKHB2Q96CS7 222 aa13.4□□□□□ -0.26
CFD-202ENST00000592860 RETNLBQ9BQ08 111 aa13.4□□□□□ -0.26
CFD-202ENST00000592860 IGKV2D-26A0A0A0MRZ7 120 aa13.39□□□□□ -0.27
CFD-202ENST00000592860 SMIM13P0DJ93 91 aa13.39□□□□□ -0.27
CFD-202ENST00000592860 CBLN2Q8IUK8 224 aa13.39□□□□□ -0.27
CFD-202ENST00000592860 FAM19A2Q8N3H0 131 aa13.38□□□□□ -0.27
CFD-202ENST00000592860 HIGD2AQ9BW72 106 aa13.37□□□□□ -0.27
CFD-202ENST00000592860 C3orf22Q8N5N4 141 aa13.36□□□□□ -0.27
CFD-202ENST00000592860 HSBP1O75506 76 aa13.34□□□□□ -0.27
CFD-202ENST00000592860 MEIG1Q5JSS6 88 aa13.34□□□□□ -0.27
CFD-202ENST00000592860 MIR7-3HGQ8N6C7 128 aa13.34□□□□□ -0.27
CFD-202ENST00000592860 MUC17Q685J3 4493 aa13.34□□□□□ -0.27
CFD-202ENST00000592860 NCR3O14931 201 aa13.33□□□□□ -0.28
CFD-202ENST00000592860 BOD1L2Q8IYS8 172 aa13.33□□□□□ -0.28
CFD-202ENST00000592860 H0Y8G0 127 aa13.32□□□□□ -0.28
CFD-202ENST00000592860 ATP6V1G1O75348 118 aa13.31□□□□□ -0.28
CFD-202ENST00000592860 LINC00310P59036 64 aa13.31□□□□□ -0.28
CFD-202ENST00000592860 SPRR4Q96PI1 79 aa13.31□□□□□ -0.28
CFD-202ENST00000592860 NDUFA12Q9UI09 145 aa13.31□□□□□ -0.28
CFD-202ENST00000592860 TSPEAR-AS2P59090 65 aa13.3□□□□□ -0.28
CFD-202ENST00000592860 HERV-K104P63124 156 aa13.3□□□□□ -0.28
CFD-202ENST00000592860 PRYO14603 147 aa13.29□□□□□ -0.28
CFD-202ENST00000592860 TRGC2P03986 189 aa13.29□□□□□ -0.28
CFD-202ENST00000592860 SLC7A5P1Q8MH63 180 aa13.29□□□□□ -0.28
CFD-202ENST00000592860 SPRR1AP35321 89 aa13.27□□□□□ -0.29
CFD-202ENST00000592860 FAT4Q6V0I7 4981 aa13.27□□□□□ -0.29
CFD-202ENST00000592860 MYMXA0A1B0GTQ4 84 aa13.26□□□□□ -0.29
CFD-202ENST00000592860 SERF1AO75920 110 aa13.26□□□□□ -0.29
CFD-202ENST00000592860 KCNQ1DNQ9H478 68 aa13.26□□□□□ -0.29
CFD-202ENST00000592860 KRTAP4-16G5E9R7 235 aaPredicted RBP13.25□□□□□ -0.29
CFD-202ENST00000592860 LEPROTL1O95214 131 aa13.25□□□□□ -0.29
CFD-202ENST00000592860 LINC00337Q8N6G1 96 aa13.25□□□□□ -0.29
CFD-202ENST00000592860 TRBV10-3A0A0K0K1G6 114 aa13.24□□□□□ -0.29
CFD-202ENST00000592860 IGLV7-46A0A075B6I9 117 aa13.23□□□□□ -0.29
CFD-202ENST00000592860 LINC00587B1AMM8 73 aa13.23□□□□□ -0.29
CFD-202ENST00000592860 CTAG1AP78358 180 aa13.23□□□□□ -0.29
CFD-202ENST00000592860 DAND5Q8N907 189 aa13.23□□□□□ -0.29
CFD-202ENST00000592860 LEPROTO15243 131 aa13.22□□□□□ -0.29
CFD-202ENST00000592860 SMCR5Q8TEV8 140 aa13.22□□□□□ -0.29
CFD-202ENST00000592860 ZNF706Q9Y5V0 76 aaPredicted RBP13.22□□□□□ -0.29
CFD-202ENST00000592860 ETDCA0A1B0GVM5 59 aa13.21□□□□□ -0.29
CFD-202ENST00000592860 TPRXLQ17RH7 258 aa13.21□□□□□ -0.29
CFD-202ENST00000592860 PMCHL2Q9BQD1 86 aa13.21□□□□□ -0.29
CFD-202ENST00000592860 MAP1LC3CQ9BXW4 147 aa13.21□□□□□ -0.29
CFD-202ENST00000592860 PPDPFQ9H3Y8 114 aa13.2□□□□□ -0.3
CFD-202ENST00000592860 FABP4P15090 132 aa13.19□□□□□ -0.3
CFD-202ENST00000592860 PLNP26678 52 aa13.19□□□□□ -0.3
CFD-202ENST00000592860 J3QQQ9 107 aa13.18□□□□□ -0.3
CFD-202ENST00000592860 CDIP1Q9H305 208 aa13.18□□□□□ -0.3
CFD-202ENST00000592860 LOC107984156A0A0G2JMH3 177 aa13.17□□□□□ -0.3
CFD-202ENST00000592860 SPAG11AQ6PDA7 123 aa13.17□□□□□ -0.3
CFD-202ENST00000592860 ARL17AQ8IVW1 177 aa13.17□□□□□ -0.3
CFD-202ENST00000592860 DPM2O94777 84 aa13.16□□□□□ -0.3
CFD-202ENST00000592860 Q8NBF4 154 aa13.16□□□□□ -0.3
CFD-202ENST00000592860 HSPB8Q9UJY1 196 aa13.16□□□□□ -0.3
CFD-202ENST00000592860 A0A0U1RQV1 116 aa13.15□□□□□ -0.3
CFD-202ENST00000592860 B5MCH6 92 aa13.15□□□□□ -0.3
CFD-202ENST00000592860 ERC2-IT1O76042 136 aa13.14□□□□□ -0.31
CFD-202ENST00000592860 DDTP30046 118 aa13.14□□□□□ -0.31
CFD-202ENST00000592860 LINC00483Q53H64 154 aa13.14□□□□□ -0.31
CFD-202ENST00000592860 TRBV10-2A0A0K0K1G8 114 aa13.13□□□□□ -0.31
CFD-202ENST00000592860 IGKCP01834 107 aa13.13□□□□□ -0.31
CFD-202ENST00000592860 HERVK_113P61574 105 aa13.13□□□□□ -0.31
CFD-202ENST00000592860 COLCA2A8K830 154 aa13.12□□□□□ -0.31
CFD-202ENST00000592860 LGALS3P17931 250 aaKnown RBP13.11□□□□□ -0.31
CFD-202ENST00000592860 NMUP48645 174 aa13.11□□□□□ -0.31
CFD-202ENST00000592860 C4orf48Q5BLP8 95 aa13.11□□□□□ -0.31
CFD-202ENST00000592860 GAGE2AQ6NT46 116 aa13.11□□□□□ -0.31
CFD-202ENST00000592860 S100A12P80511 92 aa13.1□□□□□ -0.31
CFD-202ENST00000592860 Q9BRP9 147 aa13.1□□□□□ -0.31
CFD-202ENST00000592860 SPANXB1Q9NS25 103 aaPredicted RBP13.1□□□□□ -0.31
CFD-202ENST00000592860 EIF4EBP3O60516 100 aaPredicted RBP13.08□□□□□ -0.32
CFD-202ENST00000592860 SOSTDC1Q6X4U4 206 aa13.08□□□□□ -0.32
CFD-202ENST00000592860 MIEN1Q9BRT3 115 aa13.08□□□□□ -0.32
CFD-202ENST00000592860 IGLV6-57P01721 117 aa13.07□□□□□ -0.32
CFD-202ENST00000592860 NDUFC2O95298 119 aa13.06□□□□□ -0.32
CFD-202ENST00000592860 NPC2P61916 151 aa13.06□□□□□ -0.32
CFD-202ENST00000592860 ADAMTSL4-AS1Q5T5F5 129 aa13.06□□□□□ -0.32
CFD-202ENST00000592860 Q6ZRX8 168 aa13.06□□□□□ -0.32
CFD-202ENST00000592860 FP248Q71RG6 208 aaPredicted RBP13.06□□□□□ -0.32
CFD-202ENST00000592860 IGLV9-49A0A0B4J1Y8 123 aa13.05□□□□□ -0.32
CFD-202ENST00000592860 A0A0J9YXY3 114 aa13.05□□□□□ -0.32
CFD-202ENST00000592860 MOBPQ13875 183 aa13.05□□□□□ -0.32
CFD-202ENST00000592860 SPINK1P00995 79 aa13.04□□□□□ -0.32
CFD-202ENST00000592860 S100A7L2Q5SY68 101 aa13.04□□□□□ -0.32
CFD-202ENST00000592860 E9PLD3 99 aa13.03□□□□□ -0.32
CFD-202ENST00000592860 LCE2AQ5TA79 106 aaPredicted RBP13.03□□□□□ -0.32
CFD-202ENST00000592860 TRAV23DV6A0A075B6W5 121 aa13.02□□□□□ -0.33
CFD-202ENST00000592860 KRTAP13-3Q3SY46 172 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms