RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 PTTG1IPP53801 180 aa6.38□□□□□ -1.39
SDF2-209ENST00000591903 SPINK6Q6UWN8 80 aa6.38□□□□□ -1.39
SDF2-209ENST00000591903 SPACA4Q8TDM5 124 aa6.38□□□□□ -1.39
SDF2-209ENST00000591903 PLAC8Q9NZF1 115 aa6.38□□□□□ -1.39
SDF2-209ENST00000591903 PRR3P79522 188 aaKnown RBP6.37□□□□□ -1.39
SDF2-209ENST00000591903 STPG4Q8N801 248 aa6.37□□□□□ -1.39
SDF2-209ENST00000591903 ERG28Q9UKR5 140 aa6.37□□□□□ -1.39
SDF2-209ENST00000591903 MUC2Q02817 5179 aa6.37□□□□□ -1.39
SDF2-209ENST00000591903 TIMM17BO60830 172 aa6.36□□□□□ -1.39
SDF2-209ENST00000591903 TSPEAR-AS2P59090 65 aa6.36□□□□□ -1.39
SDF2-209ENST00000591903 Q6ZRP5 223 aa6.36□□□□□ -1.39
SDF2-209ENST00000591903 A0A096LNI7 61 aa6.35□□□□□ -1.39
SDF2-209ENST00000591903 LOC107984156A0A0G2JMH3 177 aa6.35□□□□□ -1.39
SDF2-209ENST00000591903 ARL17AQ8IVW1 177 aa6.35□□□□□ -1.39
SDF2-209ENST00000591903 PPDPFQ9H3Y8 114 aa6.35□□□□□ -1.39
SDF2-209ENST00000591903 IGKV2D-26A0A0A0MRZ7 120 aa6.34□□□□□ -1.39
SDF2-209ENST00000591903 A0A0J9YXY3 114 aa6.34□□□□□ -1.39
SDF2-209ENST00000591903 DLEU1O43261 78 aa6.34□□□□□ -1.39
SDF2-209ENST00000591903 CHTF8P0CG12 524 aa6.34□□□□□ -1.39
SDF2-209ENST00000591903 RPL18AQ02543 176 aaKnown RBP6.34□□□□□ -1.39
SDF2-209ENST00000591903 ANKRD39Q53RE8 183 aa6.34□□□□□ -1.39
SDF2-209ENST00000591903 PYY3Q5JQD4 70 aa6.34□□□□□ -1.39
SDF2-209ENST00000591903 ATOH7Q8N100 152 aa6.34□□□□□ -1.39
SDF2-209ENST00000591903 ZNF815PA8K554 130 aa6.33□□□□□ -1.4
SDF2-209ENST00000591903 C9orf116Q5BN46 136 aaPredicted RBP6.33□□□□□ -1.4
SDF2-209ENST00000591903 MEIG1Q5JSS6 88 aa6.33□□□□□ -1.4
SDF2-209ENST00000591903 Q6ZVH6 145 aa6.33□□□□□ -1.4
SDF2-209ENST00000591903 VAMP8Q9BV40 100 aa6.33□□□□□ -1.4
SDF2-209ENST00000591903 GAGE2BQ13066 116 aa6.32□□□□□ -1.4
SDF2-209ENST00000591903 COPS9Q8WXC6 57 aa6.32□□□□□ -1.4
SDF2-209ENST00000591903 TP73-AS1Q9UF72 201 aa6.32□□□□□ -1.4
SDF2-209ENST00000591903 IGLV5-37A0A075B6J1 123 aa6.31□□□□□ -1.4
SDF2-209ENST00000591903 TMEM238C9JI98 176 aa6.31□□□□□ -1.4
SDF2-209ENST00000591903 SMIM6P0DI80 62 aa6.31□□□□□ -1.4
SDF2-209ENST00000591903 COX8AP10176 69 aa6.31□□□□□ -1.4
SDF2-209ENST00000591903 PFN2P35080 140 aa6.31□□□□□ -1.4
SDF2-209ENST00000591903 LINC00158P58513 81 aa6.31□□□□□ -1.4
SDF2-209ENST00000591903 LCE2AQ5TA79 106 aaPredicted RBP6.31□□□□□ -1.4
SDF2-209ENST00000591903 BOD1L2Q8IYS8 172 aa6.31□□□□□ -1.4
SDF2-209ENST00000591903 SND1-IT1Q9HBX3 110 aa6.31□□□□□ -1.4
SDF2-209ENST00000591903 IGKV2-24A0A0C4DH68 120 aa6.3□□□□□ -1.4
SDF2-209ENST00000591903 SMIM13P0DJ93 91 aa6.3□□□□□ -1.4
SDF2-209ENST00000591903 S100A12P80511 92 aa6.3□□□□□ -1.4
SDF2-209ENST00000591903 RPL24P83731 157 aaKnown RBP6.3□□□□□ -1.4
SDF2-209ENST00000591903 MAJINQ3KP22 176 aa6.3□□□□□ -1.4
SDF2-209ENST00000591903 GAGE2EQ4V326 116 aa6.3□□□□□ -1.4
SDF2-209ENST00000591903 C9orf129Q5T035 196 aaKnown RBP6.3□□□□□ -1.4
SDF2-209ENST00000591903 SPANXDQ9BXN6 97 aa6.3□□□□□ -1.4
SDF2-209ENST00000591903 SPANXCQ9NY87 97 aa6.3□□□□□ -1.4
SDF2-209ENST00000591903 GAGE2DQ9UEU5 116 aa6.3□□□□□ -1.4
SDF2-209ENST00000591903 IFITM1P13164 125 aa6.29□□□□□ -1.4
SDF2-209ENST00000591903 SRSF9Q13242 221 aaKnown RBP eCLIP6.29□□□□□ -1.47e-6■■■■□ 19.5
SDF2-209ENST00000591903 SPATA45Q537H7 98 aa6.29□□□□□ -1.4
SDF2-209ENST00000591903 SCGB1D4Q6XE38 83 aa6.29□□□□□ -1.4
SDF2-209ENST00000591903 PCP2Q8IVA1 136 aa6.29□□□□□ -1.4
SDF2-209ENST00000591903 MIR7-3HGQ8N6C7 128 aa6.29□□□□□ -1.4
SDF2-209ENST00000591903 LITAFQ99732 161 aa6.29□□□□□ -1.4
SDF2-209ENST00000591903 SPANXB1Q9NS25 103 aaPredicted RBP6.29□□□□□ -1.4
SDF2-209ENST00000591903 NDUFC2O95298 119 aa6.28□□□□□ -1.4
SDF2-209ENST00000591903 MIEN1Q9BRT3 115 aa6.28□□□□□ -1.4
SDF2-209ENST00000591903 PAM16Q9Y3D7 125 aa6.28□□□□□ -1.4
SDF2-209ENST00000591903 LOC105371267A0A1B0GV96 52 aa6.27□□□□□ -1.41
SDF2-209ENST00000591903 LBHQ53QV2 105 aaPredicted RBP6.27□□□□□ -1.41
SDF2-209ENST00000591903 XAGE1AQ9HD64 81 aa6.27□□□□□ -1.41
SDF2-209ENST00000591903 HIGD1BQ9P298 99 aa6.27□□□□□ -1.41
SDF2-209ENST00000591903 PSORS1C2Q9UIG4 136 aa6.27□□□□□ -1.41
SDF2-209ENST00000591903 TRBV10-2A0A0K0K1G8 114 aa6.26□□□□□ -1.41
SDF2-209ENST00000591903 A0A1W2PNN7 141 aa6.26□□□□□ -1.41
SDF2-209ENST00000591903 SLC25A34Q6PIV7 304 aa6.26□□□□□ -1.41
SDF2-209ENST00000591903 TTTY13Q9BZ97 58 aa6.26□□□□□ -1.41
SDF2-209ENST00000591903 M0QXV9 152 aa6.25□□□□□ -1.41
SDF2-209ENST00000591903 VPREB1P12018 145 aa6.25□□□□□ -1.41
SDF2-209ENST00000591903 ADAMTSL4-AS1Q5T5F5 129 aa6.25□□□□□ -1.41
SDF2-209ENST00000591903 KRTAP7-1Q8IUC3 87 aa6.25□□□□□ -1.41
SDF2-209ENST00000591903 NKAPP1Q8N9T2 125 aa6.24□□□□□ -1.41
SDF2-209ENST00000591903 LINC00308Q8TCZ7 52 aa6.24□□□□□ -1.41
SDF2-209ENST00000591903 CBY1Q9Y3M2 126 aa6.24□□□□□ -1.41
SDF2-209ENST00000591903 C22orf24Q9Y442 160 aa6.24□□□□□ -1.41
SDF2-209ENST00000591903 A0A0U1RRA0 63 aa6.23□□□□□ -1.41
SDF2-209ENST00000591903 TAL2Q16559 108 aa6.23□□□□□ -1.41
SDF2-209ENST00000591903 FAM19A5Q7Z5A7 132 aaPredicted RBP6.23□□□□□ -1.41
SDF2-209ENST00000591903 MRPL55Q7Z7F7 128 aaKnown RBP6.23□□□□□ -1.41
SDF2-209ENST00000591903 LINC00518Q8N0U6 118 aa6.23□□□□□ -1.41
SDF2-209ENST00000591903 FAM168BA1KXE4 195 aa6.22□□□□□ -1.41
SDF2-209ENST00000591903 M0R378 163 aa6.22□□□□□ -1.41
SDF2-209ENST00000591903 SOSTDC1Q6X4U4 206 aa6.22□□□□□ -1.41
SDF2-209ENST00000591903 C14orf144Q96I85 54 aa6.22□□□□□ -1.41
SDF2-209ENST00000591903 UQCR10Q9UDW1 63 aa6.22□□□□□ -1.41
SDF2-209ENST00000591903 PRR4Q16378 134 aa6.21□□□□□ -1.42
SDF2-209ENST00000591903 DAND5Q8N907 189 aa6.21□□□□□ -1.42
SDF2-209ENST00000591903 C2orf91Q6ZV80 131 aa6.2□□□□□ -1.42
SDF2-209ENST00000591903 IGLV1-50A0A075B6I6 118 aa6.19□□□□□ -1.42
SDF2-209ENST00000591903 PHF5AQ7RTV0 110 aaKnown RBP6.19□□□□□ -1.42
SDF2-209ENST00000591903 LINC00167Q96N53 147 aa6.19□□□□□ -1.42
SDF2-209ENST00000591903 IGLV6-57P01721 117 aa6.18□□□□□ -1.42
SDF2-209ENST00000591903 UBE2BP63146 152 aa6.18□□□□□ -1.42
SDF2-209ENST00000591903 MUSTN1Q8IVN3 82 aa6.18□□□□□ -1.42
SDF2-209ENST00000591903 Q8NDZ9 215 aa6.18□□□□□ -1.42
SDF2-209ENST00000591903 HIST1H4GQ99525 98 aa6.18□□□□□ -1.42
SDF2-209ENST00000591903 C12orf57Q99622 126 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms