RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 PRM2P04554 102 aa4.27□□□□□ -1.73
SMAD4-212ENST00000591126 NDUFV3P56181 108 aaKnown RBP4.27□□□□□ -1.73
SMAD4-212ENST00000591126 SPINK6Q6UWN8 80 aa4.27□□□□□ -1.73
SMAD4-212ENST00000591126 IGHV3OR16-9A0A0B4J2B5 98 aa4.27□□□□□ -1.73
SMAD4-212ENST00000591126 K7EP34 96 aa4.27□□□□□ -1.73
SMAD4-212ENST00000591126 CCKP06307 115 aa4.27□□□□□ -1.73
SMAD4-212ENST00000591126 TLX1NBP0CAT3 122 aa4.27□□□□□ -1.73
SMAD4-212ENST00000591126 SMCR5Q8TEV8 140 aa4.27□□□□□ -1.73
SMAD4-212ENST00000591126 MYO15AQ9UKN7 3530 aa4.27□□□□□ -1.73
SMAD4-212ENST00000591126 FOXI1Q12951 378 aa4.27□□□□□ -1.73
SMAD4-212ENST00000591126 DNAH14Q0VDD8 3507 aa4.27□□□□□ -1.73
SMAD4-212ENST00000591126 TRBV10-3A0A0K0K1G6 114 aa4.26□□□□□ -1.73
SMAD4-212ENST00000591126 Q6ZQY7 126 aa4.26□□□□□ -1.73
SMAD4-212ENST00000591126 PLA2G2DQ9UNK4 145 aa4.26□□□□□ -1.73
SMAD4-212ENST00000591126 FRYQ5TBA9 3013 aa4.26□□□□□ -1.73
SMAD4-212ENST00000591126 FN1P02751 2386 aaKnown RBP4.26□□□□□ -1.73
SMAD4-212ENST00000591126 USP34Q70CQ2 3546 aa4.26□□□□□ -1.73
SMAD4-212ENST00000591126 PRR34Q9NV39 138 aa4.26□□□□□ -1.73
SMAD4-212ENST00000591126 CHD6Q8TD26 2715 aa4.26□□□□□ -1.73
SMAD4-212ENST00000591126 LINC00694P0DN24 101 aa4.26□□□□□ -1.73
SMAD4-212ENST00000591126 LINC00528Q8N1L1 170 aa4.25□□□□□ -1.73
SMAD4-212ENST00000591126 AKAP13Q12802 2813 aa4.25□□□□□ -1.73
SMAD4-212ENST00000591126 USP9YO00507 2555 aaPredicted RBP4.25□□□□□ -1.73
SMAD4-212ENST00000591126 LINC00526Q96FQ7 95 aa4.25□□□□□ -1.73
SMAD4-212ENST00000591126 IGLV5-45A0A087WSX0 123 aa4.25□□□□□ -1.73
SMAD4-212ENST00000591126 ENHOQ6UWT2 76 aa4.25□□□□□ -1.73
SMAD4-212ENST00000591126 ATP11AUNQ6ZP68 121 aa4.25□□□□□ -1.73
SMAD4-212ENST00000591126 USP24Q9UPU5 2620 aa4.24□□□□□ -1.73
SMAD4-212ENST00000591126 K7ERS5 55 aa4.24□□□□□ -1.73
SMAD4-212ENST00000591126 TEN1Q86WV5 123 aa4.24□□□□□ -1.73
SMAD4-212ENST00000591126 DMXL2Q8TDJ6 3036 aa4.24□□□□□ -1.73
SMAD4-212ENST00000591126 IGLV5-39A0A0G2JS06 123 aa4.24□□□□□ -1.73
SMAD4-212ENST00000591126 PRR4Q16378 134 aa4.24□□□□□ -1.73
SMAD4-212ENST00000591126 LINC00304Q8N9R0 145 aa4.24□□□□□ -1.73
SMAD4-212ENST00000591126 LINC00167Q96N53 147 aa4.24□□□□□ -1.73
SMAD4-212ENST00000591126 HELZ2Q9BYK8 2649 aaKnown RBP4.24□□□□□ -1.73
SMAD4-212ENST00000591126 C8orf87E5RJ46 101 aa4.24□□□□□ -1.73
SMAD4-212ENST00000591126 ZNF861PO60384 105 aa4.24□□□□□ -1.73
SMAD4-212ENST00000591126 LINC01546A6NGU7 62 aa4.23□□□□□ -1.73
SMAD4-212ENST00000591126 A0A087WYN8 130 aa4.23□□□□□ -1.73
SMAD4-212ENST00000591126 ATOX1O00244 68 aa4.23□□□□□ -1.73
SMAD4-212ENST00000591126 OXTP01178 125 aa4.23□□□□□ -1.73
SMAD4-212ENST00000591126 CDIP1Q9H305 208 aa4.23□□□□□ -1.73
SMAD4-212ENST00000591126 BPTFQ12830 3046 aa4.22□□□□□ -1.73
SMAD4-212ENST00000591126 MAPKAPK5-AS1Q8N8E1 139 aa4.22□□□□□ -1.73
SMAD4-212ENST00000591126 NTM-AS1Q6ZSK4 140 aa4.22□□□□□ -1.73
SMAD4-212ENST00000591126 SMIM11BQ8TCY0 68 aa4.22□□□□□ -1.73
SMAD4-212ENST00000591126 C6orf48Q9UBA6 75 aa4.22□□□□□ -1.73
SMAD4-212ENST00000591126 HRCT1Q6UXD1 115 aa4.21□□□□□ -1.74
SMAD4-212ENST00000591126 DCHS1Q96JQ0 3298 aa4.21□□□□□ -1.74
SMAD4-212ENST00000591126 CLEC2BQ92478 149 aa4.21□□□□□ -1.74
SMAD4-212ENST00000591126 PRR15LQ9BU68 103 aa4.21□□□□□ -1.74
SMAD4-212ENST00000591126 LINC00643Q86TS7 51 aa4.21□□□□□ -1.74
SMAD4-212ENST00000591126 SPINK1P00995 79 aa4.2□□□□□ -1.74
SMAD4-212ENST00000591126 CENPEQ02224 2701 aa4.2□□□□□ -1.74
SMAD4-212ENST00000591126 GIG44P09565 113 aaPredicted RBP4.2□□□□□ -1.74
SMAD4-212ENST00000591126 FAM229BQ4G0N7 80 aa4.2□□□□□ -1.74
SMAD4-212ENST00000591126 IGLV7-43P04211 117 aa4.2□□□□□ -1.74
SMAD4-212ENST00000591126 Q6ZVQ6 151 aa4.2□□□□□ -1.74
SMAD4-212ENST00000591126 TP53AIP1Q9HCN2 124 aa4.2□□□□□ -1.74
SMAD4-212ENST00000591126 TMEM258P61165 79 aa4.19□□□□□ -1.74
SMAD4-212ENST00000591126 COX6B2Q6YFQ2 88 aa4.19□□□□□ -1.74
SMAD4-212ENST00000591126 C14orf132Q9NPU4 83 aa4.19□□□□□ -1.74
SMAD4-212ENST00000591126 FAM240AA0A1B0GVK7 77 aa4.19□□□□□ -1.74
SMAD4-212ENST00000591126 Q6ZRX8 168 aa4.19□□□□□ -1.74
SMAD4-212ENST00000591126 SERP1Q9Y6X1 66 aa4.19□□□□□ -1.74
SMAD4-212ENST00000591126 HECTD1Q9ULT8 2610 aa4.19□□□□□ -1.74
SMAD4-212ENST00000591126 LINC00575Q6W349 94 aa4.19□□□□□ -1.74
SMAD4-212ENST00000591126 TLN2Q9Y4G6 2542 aa4.19□□□□□ -1.74
SMAD4-212ENST00000591126 A0A0A0MQY5 61 aa4.19□□□□□ -1.74
SMAD4-212ENST00000591126 MOBPQ13875 183 aa4.19□□□□□ -1.74
SMAD4-212ENST00000591126 PHF5AQ7RTV0 110 aaKnown RBP4.19□□□□□ -1.74
SMAD4-212ENST00000591126 CFAP47Q6ZTR5 3102 aa4.18□□□□□ -1.74
SMAD4-212ENST00000591126 DMDP11532 3685 aa4.18□□□□□ -1.74
SMAD4-212ENST00000591126 SPACA4Q8TDM5 124 aa4.18□□□□□ -1.74
SMAD4-212ENST00000591126 ZZEF1O43149 2961 aa4.18□□□□□ -1.74
SMAD4-212ENST00000591126 PRLHP81277 87 aa4.18□□□□□ -1.74
SMAD4-212ENST00000591126 Q8N9L7 120 aa4.17□□□□□ -1.74
SMAD4-212ENST00000591126 POLQO75417 2590 aa4.17□□□□□ -1.74
SMAD4-212ENST00000591126 BOD1L1Q8NFC6 3051 aa4.17□□□□□ -1.74
SMAD4-212ENST00000591126 K7ERJ3 54 aa4.17□□□□□ -1.74
SMAD4-212ENST00000591126 FXYD2P54710 66 aa4.17□□□□□ -1.74
SMAD4-212ENST00000591126 CD164Q04900 197 aa4.17□□□□□ -1.74
SMAD4-212ENST00000591126 IGSF10Q6WRI0 2623 aa4.16□□□□□ -1.74
SMAD4-212ENST00000591126 ELOF1P60002 83 aaKnown RBP4.16□□□□□ -1.74
SMAD4-212ENST00000591126 PLXNB1O43157 2135 aa4.16□□□□□ -1.74
SMAD4-212ENST00000591126 TNP2Q05952 138 aa4.16□□□□□ -1.74
SMAD4-212ENST00000591126 TRIAP1O43715 76 aa4.15□□□□□ -1.74
SMAD4-212ENST00000591126 ETDBQ3ZM63 59 aa4.15□□□□□ -1.74
SMAD4-212ENST00000591126 BRK1Q8WUW1 75 aa4.15□□□□□ -1.74
SMAD4-212ENST00000591126 RBM12B-AS1Q9P1G2 102 aa4.15□□□□□ -1.74
SMAD4-212ENST00000591126 IGLV5-37A0A075B6J1 123 aa4.15□□□□□ -1.74
SMAD4-212ENST00000591126 KCNQ1DNQ9H478 68 aa4.15□□□□□ -1.74
SMAD4-212ENST00000591126 IGHV6-1A0A0B4J1U7 121 aa4.15□□□□□ -1.75
SMAD4-212ENST00000591126 TAX1BP3O14907 124 aa4.15□□□□□ -1.75
SMAD4-212ENST00000591126 NDUFC1O43677 76 aa4.15□□□□□ -1.75
SMAD4-212ENST00000591126 LINC00313P59037 77 aa4.15□□□□□ -1.75
SMAD4-212ENST00000591126 C4orf26Q17RF5 130 aa4.15□□□□□ -1.75
SMAD4-212ENST00000591126 ACANP16112 2415 aa4.14□□□□□ -1.75
SMAD4-212ENST00000591126 ATP5EP56381 51 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms