RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 NKAPP1Q8N9T2 125 aa8.61□□□□□ -1.03
SCAMP4-212ENST00000590266 DPM2O94777 84 aa8.6□□□□□ -1.03
SCAMP4-212ENST00000590266 PLNP26678 52 aa8.6□□□□□ -1.03
SCAMP4-212ENST00000590266 SND1-IT1Q9HBX3 110 aa8.6□□□□□ -1.03
SCAMP4-212ENST00000590266 PLA2G2DQ9UNK4 145 aa8.6□□□□□ -1.03
SCAMP4-212ENST00000590266 LRP1Q07954 4544 aaKnown RBP8.6□□□□□ -1.03
SCAMP4-212ENST00000590266 RPL37AP8A6NKH3 93 aa8.59□□□□□ -1.03
SCAMP4-212ENST00000590266 COX17Q14061 63 aa8.59□□□□□ -1.03
SCAMP4-212ENST00000590266 MEIG1Q5JSS6 88 aa8.59□□□□□ -1.03
SCAMP4-212ENST00000590266 LINC01545Q5VT33 79 aa8.59□□□□□ -1.03
SCAMP4-212ENST00000590266 PKHD1L1Q86WI1 4243 aa8.59□□□□□ -1.03
SCAMP4-212ENST00000590266 IGKCP01834 107 aa8.58□□□□□ -1.04
SCAMP4-212ENST00000590266 LINC00167Q96N53 147 aa8.58□□□□□ -1.04
SCAMP4-212ENST00000590266 TP73-AS1Q9UF72 201 aa8.58□□□□□ -1.04
SCAMP4-212ENST00000590266 C20orf202A1L168 122 aa8.57□□□□□ -1.04
SCAMP4-212ENST00000590266 MT1HL1P0DM35 61 aa8.57□□□□□ -1.04
SCAMP4-212ENST00000590266 HERVK_113P61574 105 aa8.57□□□□□ -1.04
SCAMP4-212ENST00000590266 NDUFA12Q9UI09 145 aa8.57□□□□□ -1.04
SCAMP4-212ENST00000590266 SMIM13P0DJ93 91 aa8.56□□□□□ -1.04
SCAMP4-212ENST00000590266 TSPEAR-AS2P59090 65 aa8.56□□□□□ -1.04
SCAMP4-212ENST00000590266 DIRC1Q969H9 104 aa8.56□□□□□ -1.04
SCAMP4-212ENST00000590266 IGKV2-28A0A075B6P5 120 aa8.55□□□□□ -1.04
SCAMP4-212ENST00000590266 MYMXA0A1B0GTQ4 84 aa8.55□□□□□ -1.04
SCAMP4-212ENST00000590266 LEPROTO15243 131 aa8.55□□□□□ -1.04
SCAMP4-212ENST00000590266 IGKV2D-28P01615 120 aa8.55□□□□□ -1.04
SCAMP4-212ENST00000590266 LINC01600Q96MT4 127 aa8.55□□□□□ -1.04
SCAMP4-212ENST00000590266 FAT3Q8TDW7 4589 aa8.54□□□□□ -1.04
SCAMP4-212ENST00000590266 IGLV5-37A0A075B6J1 123 aa8.54□□□□□ -1.04
SCAMP4-212ENST00000590266 HERV-K104P63124 156 aa8.54□□□□□ -1.04
SCAMP4-212ENST00000590266 RPL24P83731 157 aaKnown RBP8.54□□□□□ -1.04
SCAMP4-212ENST00000590266 PLEKHB2Q96CS7 222 aa8.54□□□□□ -1.04
SCAMP4-212ENST00000590266 H0Y9J4 135 aa8.53□□□□□ -1.04
SCAMP4-212ENST00000590266 J3QQQ9 107 aa8.53□□□□□ -1.04
SCAMP4-212ENST00000590266 SCGB1D1O95968 90 aa8.53□□□□□ -1.04
SCAMP4-212ENST00000590266 VPREB1P12018 145 aa8.53□□□□□ -1.04
SCAMP4-212ENST00000590266 LGALS3P17931 250 aaKnown RBP8.53□□□□□ -1.04
SCAMP4-212ENST00000590266 HMCN2Q8NDA2 5059 aa8.52□□□□□ -1.05
SCAMP4-212ENST00000590266 AKR1D1P51857 326 aa8.52□□□□□ -1.05
SCAMP4-212ENST00000590266 MIR7-3HGQ8N6C7 128 aa8.52□□□□□ -1.05
SCAMP4-212ENST00000590266 Q8NDZ9 215 aa8.52□□□□□ -1.05
SCAMP4-212ENST00000590266 BCE1O60756 84 aa8.51□□□□□ -1.05
SCAMP4-212ENST00000590266 JOSD1Q15040 202 aaPredicted RBP8.51□□□□□ -1.05
SCAMP4-212ENST00000590266 LINC00587B1AMM8 73 aa8.5□□□□□ -1.05
SCAMP4-212ENST00000590266 ZNF861PO60384 105 aa8.5□□□□□ -1.05
SCAMP4-212ENST00000590266 BOD1L2Q8IYS8 172 aa8.5□□□□□ -1.05
SCAMP4-212ENST00000590266 ATOH7Q8N100 152 aa8.5□□□□□ -1.05
SCAMP4-212ENST00000590266 DAND5Q8N907 189 aa8.5□□□□□ -1.05
SCAMP4-212ENST00000590266 LOC105371267A0A1B0GV96 52 aa8.49□□□□□ -1.05
SCAMP4-212ENST00000590266 RPL28P46779 137 aaKnown RBP8.49□□□□□ -1.05
SCAMP4-212ENST00000590266 UBE2AP49459 152 aa8.49□□□□□ -1.05
SCAMP4-212ENST00000590266 TMEM238C9JI98 176 aa8.48□□□□□ -1.05
SCAMP4-212ENST00000590266 NCR3O14931 201 aa8.48□□□□□ -1.05
SCAMP4-212ENST00000590266 NMUP48645 174 aa8.48□□□□□ -1.05
SCAMP4-212ENST00000590266 PRR26Q8N8Z3 221 aa8.48□□□□□ -1.05
SCAMP4-212ENST00000590266 IGLV1-50A0A075B6I6 118 aa8.47□□□□□ -1.05
SCAMP4-212ENST00000590266 E9PLD3 99 aa8.47□□□□□ -1.05
SCAMP4-212ENST00000590266 PYY3Q5JQD4 70 aa8.47□□□□□ -1.05
SCAMP4-212ENST00000590266 KRTAP10-8P60410 259 aa8.46□□□□□ -1.06
SCAMP4-212ENST00000590266 FAM19A1Q7Z5A9 133 aa8.46□□□□□ -1.06
SCAMP4-212ENST00000590266 TMEM126AQ9H061 195 aa8.46□□□□□ -1.06
SCAMP4-212ENST00000590266 M0R378 163 aa8.45□□□□□ -1.06
SCAMP4-212ENST00000590266 NPC2P61916 151 aa8.45□□□□□ -1.06
SCAMP4-212ENST00000590266 PRLHP81277 87 aa8.45□□□□□ -1.06
SCAMP4-212ENST00000590266 MIEN1Q9BRT3 115 aa8.45□□□□□ -1.06
SCAMP4-212ENST00000590266 HSBP1L1C9JCN9 74 aa8.44□□□□□ -1.06
SCAMP4-212ENST00000590266 A0A0J9YXY3 114 aa8.43□□□□□ -1.06
SCAMP4-212ENST00000590266 KRTAP1-4P0C5Y4 121 aa8.43□□□□□ -1.06
SCAMP4-212ENST00000590266 ANKRD39Q53RE8 183 aa8.43□□□□□ -1.06
SCAMP4-212ENST00000590266 UBR4Q5T4S7 5183 aa8.42□□□□□ -1.06
SCAMP4-212ENST00000590266 IGKV2D-26A0A0A0MRZ7 120 aa8.41□□□□□ -1.06
SCAMP4-212ENST00000590266 ZNF815PA8K554 130 aa8.41□□□□□ -1.06
SCAMP4-212ENST00000590266 VAMP8Q9BV40 100 aa8.41□□□□□ -1.06
SCAMP4-212ENST00000590266 TTTY13Q9BZ97 58 aa8.41□□□□□ -1.06
SCAMP4-212ENST00000590266 ADAMTSL4-AS1Q5T5F5 129 aa8.4□□□□□ -1.06
SCAMP4-212ENST00000590266 KRTAP13-1Q8IUC0 172 aa8.4□□□□□ -1.06
SCAMP4-212ENST00000590266 TRBV10-3A0A0K0K1G6 114 aa8.39□□□□□ -1.07
SCAMP4-212ENST00000590266 SMIM6P0DI80 62 aa8.39□□□□□ -1.07
SCAMP4-212ENST00000590266 ANAPC11Q9NYG5 84 aa8.39□□□□□ -1.07
SCAMP4-212ENST00000590266 PAM16Q9Y3D7 125 aa8.39□□□□□ -1.07
SCAMP4-212ENST00000590266 PRYO14603 147 aa8.38□□□□□ -1.07
SCAMP4-212ENST00000590266 SPATA45Q537H7 98 aa8.38□□□□□ -1.07
SCAMP4-212ENST00000590266 HIGD2AQ9BW72 106 aa8.38□□□□□ -1.07
SCAMP4-212ENST00000590266 DDTP30046 118 aa8.37□□□□□ -1.07
SCAMP4-212ENST00000590266 RPL13AP40429 203 aaKnown RBP8.37□□□□□ -1.07
SCAMP4-212ENST00000590266 S100A12P80511 92 aa8.37□□□□□ -1.07
SCAMP4-212ENST00000590266 SOSTDC1Q6X4U4 206 aa8.37□□□□□ -1.07
SCAMP4-212ENST00000590266 SPANXB1Q9NS25 103 aaPredicted RBP8.37□□□□□ -1.07
SCAMP4-212ENST00000590266 TNXBP22105 4242 aa8.37□□□□□ -1.07
SCAMP4-212ENST00000590266 LOC107984156A0A0G2JMH3 177 aa8.36□□□□□ -1.07
SCAMP4-212ENST00000590266 EIF4EBP3O60516 100 aaPredicted RBP8.36□□□□□ -1.07
SCAMP4-212ENST00000590266 S100A7L2Q5SY68 101 aa8.36□□□□□ -1.07
SCAMP4-212ENST00000590266 PCP2Q8IVA1 136 aa8.36□□□□□ -1.07
SCAMP4-212ENST00000590266 ARL17AQ8IVW1 177 aa8.36□□□□□ -1.07
SCAMP4-212ENST00000590266 A0A087X002 238 aa8.35□□□□□ -1.07
SCAMP4-212ENST00000590266 ETDCA0A1B0GVM5 59 aa8.35□□□□□ -1.07
SCAMP4-212ENST00000590266 SCGB1D4Q6XE38 83 aa8.35□□□□□ -1.07
SCAMP4-212ENST00000590266 TRBV10-2A0A0K0K1G8 114 aa8.34□□□□□ -1.07
SCAMP4-212ENST00000590266 CRYGAP11844 174 aa8.34□□□□□ -1.07
SCAMP4-212ENST00000590266 LITAFQ99732 161 aa8.34□□□□□ -1.07
SCAMP4-212ENST00000590266 KCNQ1DNQ9H478 68 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms