RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 C12orf57Q99622 126 aa10.75□□□□□ -0.69
H3F3B-209ENST00000589949 CST9LQ9H4G1 147 aa10.75□□□□□ -0.69
H3F3B-209ENST00000589949 CHTOPQ9Y3Y2 248 aaKnown RBP10.74□□□□□ -0.69
H3F3B-209ENST00000589949 SMIM1B2RUZ4 78 aa10.73□□□□□ -0.69
H3F3B-209ENST00000589949 F8VRH5 84 aa10.73□□□□□ -0.69
H3F3B-209ENST00000589949 ZNF861PO60384 105 aa10.73□□□□□ -0.69
H3F3B-209ENST00000589949 GEMIN7Q9H840 131 aaKnown RBP10.73□□□□□ -0.69
H3F3B-209ENST00000589949 S100A12P80511 92 aa10.72□□□□□ -0.69
H3F3B-209ENST00000589949 PMCHL2Q9BQD1 86 aa10.72□□□□□ -0.69
H3F3B-209ENST00000589949 DPM2O94777 84 aa10.71□□□□□ -0.69
H3F3B-209ENST00000589949 SEC11AP67812 179 aa10.71□□□□□ -0.69
H3F3B-209ENST00000589949 IGKCP01834 107 aa10.7□□□□□ -0.7
H3F3B-209ENST00000589949 PLNP26678 52 aa10.7□□□□□ -0.7
H3F3B-209ENST00000589949 ATOH7Q8N100 152 aa10.7□□□□□ -0.7
H3F3B-209ENST00000589949 IGLV5-45A0A087WSX0 123 aa10.69□□□□□ -0.7
H3F3B-209ENST00000589949 TINCRA0A1B0GVN0 87 aa10.68□□□□□ -0.7
H3F3B-209ENST00000589949 LBHQ53QV2 105 aaPredicted RBP10.68□□□□□ -0.7
H3F3B-209ENST00000589949 MRPL55Q7Z7F7 128 aaKnown RBP10.68□□□□□ -0.7
H3F3B-209ENST00000589949 VAMP8Q9BV40 100 aa10.68□□□□□ -0.7
H3F3B-209ENST00000589949 TP73-AS1Q9UF72 201 aa10.68□□□□□ -0.7
H3F3B-209ENST00000589949 IGLC3P0DOY3 106 aa10.67□□□□□ -0.7
H3F3B-209ENST00000589949 COX7B2Q8TF08 81 aa10.67□□□□□ -0.7
H3F3B-209ENST00000589949 A0A087X002 238 aa10.66□□□□□ -0.7
H3F3B-209ENST00000589949 RPL37AP8A6NKH3 93 aa10.66□□□□□ -0.7
H3F3B-209ENST00000589949 HSBP1L1C9JCN9 74 aa10.66□□□□□ -0.7
H3F3B-209ENST00000589949 SPINK8P0C7L1 97 aa10.66□□□□□ -0.7
H3F3B-209ENST00000589949 RPL13AP40429 203 aaKnown RBP10.66□□□□□ -0.7
H3F3B-209ENST00000589949 CXCL5P42830 114 aa10.66□□□□□ -0.7
H3F3B-209ENST00000589949 LINC00167Q96N53 147 aa10.66□□□□□ -0.7
H3F3B-209ENST00000589949 C11orf86A6NJI1 115 aa10.64□□□□□ -0.71
H3F3B-209ENST00000589949 BCE1O60756 84 aa10.64□□□□□ -0.71
H3F3B-209ENST00000589949 PAM16Q9Y3D7 125 aa10.64□□□□□ -0.71
H3F3B-209ENST00000589949 GAGE10A6NGK3 116 aa10.63□□□□□ -0.71
H3F3B-209ENST00000589949 PRR4Q16378 134 aa10.63□□□□□ -0.71
H3F3B-209ENST00000589949 SPATA45Q537H7 98 aa10.63□□□□□ -0.71
H3F3B-209ENST00000589949 ANAPC11Q9NYG5 84 aa10.62□□□□□ -0.71
H3F3B-209ENST00000589949 IGLV5-37A0A075B6J1 123 aa10.6□□□□□ -0.71
H3F3B-209ENST00000589949 TSPAN13O95857 204 aa10.6□□□□□ -0.71
H3F3B-209ENST00000589949 ZNF22P17026 224 aaPredicted RBP10.6□□□□□ -0.71
H3F3B-209ENST00000589949 RPL28P46779 137 aaKnown RBP10.6□□□□□ -0.71
H3F3B-209ENST00000589949 TMEM170BQ5T4T1 132 aa10.6□□□□□ -0.71
H3F3B-209ENST00000589949 KRTAP13-1Q8IUC0 172 aa10.6□□□□□ -0.71
H3F3B-209ENST00000589949 HERVK_113P61574 105 aa10.59□□□□□ -0.71
H3F3B-209ENST00000589949 ANKRD39Q53RE8 183 aa10.59□□□□□ -0.71
H3F3B-209ENST00000589949 IGLV5-39A0A0G2JS06 123 aa10.57□□□□□ -0.72
H3F3B-209ENST00000589949 TMEM223A0PJW6 202 aa10.57□□□□□ -0.72
H3F3B-209ENST00000589949 KRTAP13-2Q52LG2 175 aa10.57□□□□□ -0.72
H3F3B-209ENST00000589949 PRO1933Q9H354 126 aa10.57□□□□□ -0.72
H3F3B-209ENST00000589949 E9PLD3 99 aa10.56□□□□□ -0.72
H3F3B-209ENST00000589949 TSTD3H0UI37 97 aa10.56□□□□□ -0.72
H3F3B-209ENST00000589949 H3BRM9 83 aa10.56□□□□□ -0.72
H3F3B-209ENST00000589949 MUC2Q02817 5179 aa10.56□□□□□ -0.72
H3F3B-209ENST00000589949 PFN2P35080 140 aa10.55□□□□□ -0.72
H3F3B-209ENST00000589949 Q8NDZ9 215 aa10.55□□□□□ -0.72
H3F3B-209ENST00000589949 IGKV2-28A0A075B6P5 120 aa10.54□□□□□ -0.72
H3F3B-209ENST00000589949 IGKV2D-26A0A0A0MRZ7 120 aa10.54□□□□□ -0.72
H3F3B-209ENST00000589949 IGKV2D-28P01615 120 aa10.54□□□□□ -0.72
H3F3B-209ENST00000589949 COX8AP10176 69 aa10.54□□□□□ -0.72
H3F3B-209ENST00000589949 CRYGAP11844 174 aa10.54□□□□□ -0.72
H3F3B-209ENST00000589949 TYMSOSQ8TAI1 123 aa10.54□□□□□ -0.72
H3F3B-209ENST00000589949 NMUP48645 174 aa10.53□□□□□ -0.72
H3F3B-209ENST00000589949 NKAPP1Q8N9T2 125 aa10.53□□□□□ -0.72
H3F3B-209ENST00000589949 C14orf144Q96I85 54 aa10.53□□□□□ -0.72
H3F3B-209ENST00000589949 UQCR10Q9UDW1 63 aa10.53□□□□□ -0.72
H3F3B-209ENST00000589949 LEPROTO15243 131 aa10.52□□□□□ -0.73
H3F3B-209ENST00000589949 VPREB1P12018 145 aa10.52□□□□□ -0.73
H3F3B-209ENST00000589949 MIEN1Q9BRT3 115 aa10.52□□□□□ -0.73
H3F3B-209ENST00000589949 SND1-IT1Q9HBX3 110 aa10.52□□□□□ -0.73
H3F3B-209ENST00000589949 DLEU1O43261 78 aa10.51□□□□□ -0.73
H3F3B-209ENST00000589949 UBE2AP49459 152 aa10.51□□□□□ -0.73
H3F3B-209ENST00000589949 PLEKHB2Q96CS7 222 aa10.51□□□□□ -0.73
H3F3B-209ENST00000589949 TMEM238C9JI98 176 aa10.5□□□□□ -0.73
H3F3B-209ENST00000589949 PRLHP81277 87 aa10.5□□□□□ -0.73
H3F3B-209ENST00000589949 SLC25A34Q6PIV7 304 aa10.5□□□□□ -0.73
H3F3B-209ENST00000589949 BOD1L2Q8IYS8 172 aa10.5□□□□□ -0.73
H3F3B-209ENST00000589949 ZNF625Q96I27 306 aaPredicted RBP10.5□□□□□ -0.73
H3F3B-209ENST00000589949 ERG28Q9UKR5 140 aa10.5□□□□□ -0.73
H3F3B-209ENST00000589949 PCP2Q8IVA1 136 aa10.49□□□□□ -0.73
H3F3B-209ENST00000589949 J3QQQ9 107 aa10.48□□□□□ -0.73
H3F3B-209ENST00000589949 LGALS3P17931 250 aaKnown RBP10.48□□□□□ -0.73
H3F3B-209ENST00000589949 M0R378 163 aa10.47□□□□□ -0.73
H3F3B-209ENST00000589949 TMEM126AQ9H061 195 aa10.47□□□□□ -0.73
H3F3B-209ENST00000589949 PCP4L1A6NKN8 68 aa10.46□□□□□ -0.73
H3F3B-209ENST00000589949 DDTP30046 118 aa10.46□□□□□ -0.73
H3F3B-209ENST00000589949 RETNLBQ9BQ08 111 aa10.46□□□□□ -0.73
H3F3B-209ENST00000589949 MYMXA0A1B0GTQ4 84 aa10.45□□□□□ -0.74
H3F3B-209ENST00000589949 TSPEAR-AS2P59090 65 aa10.45□□□□□ -0.74
H3F3B-209ENST00000589949 FAM229BQ4G0N7 80 aa10.45□□□□□ -0.74
H3F3B-209ENST00000589949 TTTY13Q9BZ97 58 aa10.45□□□□□ -0.74
H3F3B-209ENST00000589949 ZNF815PA8K554 130 aa10.44□□□□□ -0.74
H3F3B-209ENST00000589949 COX17Q14061 63 aa10.44□□□□□ -0.74
H3F3B-209ENST00000589949 FAM19A1Q7Z5A9 133 aa10.44□□□□□ -0.74
H3F3B-209ENST00000589949 LINC00304Q8N9R0 145 aa10.42□□□□□ -0.74
H3F3B-209ENST00000589949 HIGD1BQ9P298 99 aa10.41□□□□□ -0.74
H3F3B-209ENST00000589949 NDUFA12Q9UI09 145 aa10.41□□□□□ -0.74
H3F3B-209ENST00000589949 RPL24P83731 157 aaKnown RBP10.4□□□□□ -0.74
H3F3B-209ENST00000589949 C2orf91Q6ZV80 131 aa10.4□□□□□ -0.74
H3F3B-209ENST00000589949 C3orf22Q8N5N4 141 aa10.4□□□□□ -0.74
H3F3B-209ENST00000589949 A0A0U1RRA0 63 aa10.39□□□□□ -0.75
H3F3B-209ENST00000589949 SCGB1D4Q6XE38 83 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms