RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 SCGB1D4Q6XE38 83 aa9.74□□□□□ -0.85
RPRD1A-208ENST00000589050 DAND5Q8N907 189 aa9.74□□□□□ -0.85
RPRD1A-208ENST00000589050 EPM2AB3EWF7 344 aa9.73□□□□□ -0.85
RPRD1A-208ENST00000589050 SERTAD4-AS1Q5TG53 156 aa9.73□□□□□ -0.85
RPRD1A-208ENST00000589050 TIMM17BO60830 172 aa9.72□□□□□ -0.85
RPRD1A-208ENST00000589050 ADAMTSL4-AS1Q5T5F5 129 aa9.72□□□□□ -0.85
RPRD1A-208ENST00000589050 KRTAP7-1Q8IUC3 87 aa9.72□□□□□ -0.85
RPRD1A-208ENST00000589050 RYR1P21817 5038 aa9.72□□□□□ -0.85
RPRD1A-208ENST00000589050 M0QXV9 152 aa9.71□□□□□ -0.86
RPRD1A-208ENST00000589050 LITAFQ99732 161 aa9.71□□□□□ -0.86
RPRD1A-208ENST00000589050 PLA2G2DQ9UNK4 145 aa9.71□□□□□ -0.86
RPRD1A-208ENST00000589050 COX8AP10176 69 aa9.7□□□□□ -0.86
RPRD1A-208ENST00000589050 PHF5AQ7RTV0 110 aaKnown RBP9.7□□□□□ -0.86
RPRD1A-208ENST00000589050 LINC00528Q8N1L1 170 aa9.7□□□□□ -0.86
RPRD1A-208ENST00000589050 KIAA1109Q2LD37 5005 aa9.7□□□□□ -0.86
RPRD1A-208ENST00000589050 TMEM238C9JI98 176 aa9.69□□□□□ -0.86
RPRD1A-208ENST00000589050 NPC2P61916 151 aa9.69□□□□□ -0.86
RPRD1A-208ENST00000589050 C7orf33Q8WU49 177 aa9.69□□□□□ -0.86
RPRD1A-208ENST00000589050 MIEN1Q9BRT3 115 aa9.69□□□□□ -0.86
RPRD1A-208ENST00000589050 C22orf24Q9Y442 160 aa9.69□□□□□ -0.86
RPRD1A-208ENST00000589050 LOC105371267A0A1B0GV96 52 aa9.68□□□□□ -0.86
RPRD1A-208ENST00000589050 RPL24P83731 157 aaKnown RBP9.68□□□□□ -0.86
RPRD1A-208ENST00000589050 BOD1L2Q8IYS8 172 aa9.68□□□□□ -0.86
RPRD1A-208ENST00000589050 NKAPP1Q8N9T2 125 aa9.68□□□□□ -0.86
RPRD1A-208ENST00000589050 C14orf144Q96I85 54 aa9.68□□□□□ -0.86
RPRD1A-208ENST00000589050 TP73-AS1Q9UF72 201 aa9.68□□□□□ -0.86
RPRD1A-208ENST00000589050 IGLV5-37A0A075B6J1 123 aa9.67□□□□□ -0.86
RPRD1A-208ENST00000589050 VPREB1P12018 145 aa9.67□□□□□ -0.86
RPRD1A-208ENST00000589050 Q8N1X5 172 aa9.67□□□□□ -0.86
RPRD1A-208ENST00000589050 Q8NDZ9 215 aa9.67□□□□□ -0.86
RPRD1A-208ENST00000589050 LOC107984156A0A0G2JMH3 177 aa9.66□□□□□ -0.86
RPRD1A-208ENST00000589050 FAM229AH3BQW9 127 aa9.66□□□□□ -0.86
RPRD1A-208ENST00000589050 S100A12P80511 92 aa9.66□□□□□ -0.86
RPRD1A-208ENST00000589050 LBHQ53QV2 105 aaPredicted RBP9.66□□□□□ -0.86
RPRD1A-208ENST00000589050 SOSTDC1Q6X4U4 206 aa9.66□□□□□ -0.86
RPRD1A-208ENST00000589050 MRPL55Q7Z7F7 128 aaKnown RBP9.66□□□□□ -0.86
RPRD1A-208ENST00000589050 ARL17AQ8IVW1 177 aa9.66□□□□□ -0.86
RPRD1A-208ENST00000589050 SPANXDQ9BXN6 97 aa9.66□□□□□ -0.86
RPRD1A-208ENST00000589050 SPANXCQ9NY87 97 aa9.66□□□□□ -0.86
RPRD1A-208ENST00000589050 DLEU1O43261 78 aa9.65□□□□□ -0.86
RPRD1A-208ENST00000589050 UBE2BP63146 152 aa9.65□□□□□ -0.86
RPRD1A-208ENST00000589050 LINC00308Q8TCZ7 52 aa9.65□□□□□ -0.86
RPRD1A-208ENST00000589050 KRTAP17-1Q9BYP8 105 aa9.65□□□□□ -0.86
RPRD1A-208ENST00000589050 HSPG2P98160 4391 aa9.64□□□□□ -0.87
RPRD1A-208ENST00000589050 GAGE10A6NGK3 116 aa9.64□□□□□ -0.87
RPRD1A-208ENST00000589050 EIF4EBP3O60516 100 aaPredicted RBP9.64□□□□□ -0.87
RPRD1A-208ENST00000589050 Q5VSD8 79 aa9.64□□□□□ -0.87
RPRD1A-208ENST00000589050 SLC25A34Q6PIV7 304 aa9.64□□□□□ -0.87
RPRD1A-208ENST00000589050 NCR3O14931 201 aa9.63□□□□□ -0.87
RPRD1A-208ENST00000589050 SMIM6P0DI80 62 aa9.63□□□□□ -0.87
RPRD1A-208ENST00000589050 RPL37AP61513 92 aaKnown RBP9.63□□□□□ -0.87
RPRD1A-208ENST00000589050 PRR3P79522 188 aaKnown RBP9.63□□□□□ -0.87
RPRD1A-208ENST00000589050 Q6ZVH6 145 aa9.63□□□□□ -0.87
RPRD1A-208ENST00000589050 LINC00167Q96N53 147 aa9.63□□□□□ -0.87
RPRD1A-208ENST00000589050 PLA2G1BP04054 148 aaKnown RBP9.62□□□□□ -0.87
RPRD1A-208ENST00000589050 SRSF9Q13242 221 aaKnown RBP eCLIP9.62□□□□□ -0.87
RPRD1A-208ENST00000589050 SPANXB1Q9NS25 103 aaPredicted RBP9.62□□□□□ -0.87
RPRD1A-208ENST00000589050 RPL37AP8A6NKH3 93 aa9.61□□□□□ -0.87
RPRD1A-208ENST00000589050 M0R378 163 aa9.61□□□□□ -0.87
RPRD1A-208ENST00000589050 NDUFC2O95298 119 aa9.61□□□□□ -0.87
RPRD1A-208ENST00000589050 IFITM1P13164 125 aa9.61□□□□□ -0.87
RPRD1A-208ENST00000589050 KRTAP11-1Q8IUC1 163 aa9.61□□□□□ -0.87
RPRD1A-208ENST00000589050 COPS9Q8WXC6 57 aa9.61□□□□□ -0.87
RPRD1A-208ENST00000589050 MUSTN1Q8IVN3 82 aa9.6□□□□□ -0.87
RPRD1A-208ENST00000589050 HERC2O95714 4834 aa9.6□□□□□ -0.87
RPRD1A-208ENST00000589050 PSORS1C2Q9UIG4 136 aa9.59□□□□□ -0.87
RPRD1A-208ENST00000589050 IGKV2-28A0A075B6P5 120 aa9.58□□□□□ -0.88
RPRD1A-208ENST00000589050 IGKV2D-28P01615 120 aa9.58□□□□□ -0.88
RPRD1A-208ENST00000589050 HIST1H4GQ99525 98 aa9.58□□□□□ -0.88
RPRD1A-208ENST00000589050 HIGD1BQ9P298 99 aa9.58□□□□□ -0.88
RPRD1A-208ENST00000589050 IGLV1-50A0A075B6I6 118 aa9.57□□□□□ -0.88
RPRD1A-208ENST00000589050 TRBV10-2A0A0K0K1G8 114 aa9.57□□□□□ -0.88
RPRD1A-208ENST00000589050 C2orf91Q6ZV80 131 aa9.57□□□□□ -0.88
RPRD1A-208ENST00000589050 PPDPFQ9H3Y8 114 aa9.57□□□□□ -0.88
RPRD1A-208ENST00000589050 KRTAP10-4P60372 401 aaPredicted RBP9.56□□□□□ -0.88
RPRD1A-208ENST00000589050 C1orf137Q5JT78 98 aa9.56□□□□□ -0.88
RPRD1A-208ENST00000589050 UQCR10Q9UDW1 63 aa9.55□□□□□ -0.88
RPRD1A-208ENST00000589050 TRBV10-3A0A0K0K1G6 114 aa9.54□□□□□ -0.88
RPRD1A-208ENST00000589050 DDTP30046 118 aa9.54□□□□□ -0.88
RPRD1A-208ENST00000589050 S100A7L2Q5SY68 101 aa9.54□□□□□ -0.88
RPRD1A-208ENST00000589050 KRTAP4-5Q9BYR2 181 aa9.54□□□□□ -0.88
RPRD1A-208ENST00000589050 LORP23490 312 aaPredicted RBP9.53□□□□□ -0.88
RPRD1A-208ENST00000589050 LINC00518Q8N0U6 118 aa9.53□□□□□ -0.88
RPRD1A-208ENST00000589050 C12orf57Q99622 126 aa9.53□□□□□ -0.88
RPRD1A-208ENST00000589050 PRO1933Q9H354 126 aa9.53□□□□□ -0.88
RPRD1A-208ENST00000589050 OR13C6PQ8NH95 151 aa9.52□□□□□ -0.89
RPRD1A-208ENST00000589050 REG3GQ6UW15 175 aa9.51□□□□□ -0.89
RPRD1A-208ENST00000589050 TMEM126AQ9H061 195 aa9.51□□□□□ -0.89
RPRD1A-208ENST00000589050 VPS13BQ7Z7G8 4022 aa9.51□□□□□ -0.89
RPRD1A-208ENST00000589050 FAT1Q14517 4588 aa9.5□□□□□ -0.89
RPRD1A-208ENST00000589050 A4D1N5 150 aa9.5□□□□□ -0.89
RPRD1A-208ENST00000589050 PRYO14603 147 aa9.5□□□□□ -0.89
RPRD1A-208ENST00000589050 BCE1O60756 84 aa9.5□□□□□ -0.89
RPRD1A-208ENST00000589050 IGLV6-57P01721 117 aa9.5□□□□□ -0.89
RPRD1A-208ENST00000589050 IGLV7-43P04211 117 aa9.5□□□□□ -0.89
RPRD1A-208ENST00000589050 TAL2Q16559 108 aa9.5□□□□□ -0.89
RPRD1A-208ENST00000589050 LINC00337Q8N6G1 96 aa9.5□□□□□ -0.89
RPRD1A-208ENST00000589050 KCNQ1DNQ9H478 68 aa9.5□□□□□ -0.89
RPRD1A-208ENST00000589050 HNRNPA3P51991 378 aaKnown RBP9.49□□□□□ -0.89
RPRD1A-208ENST00000589050 CEND1Q8N111 149 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms