RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 F8WDY8 70 aa13.42□□□□□ -0.26
ATG4D-204ENST00000586417 USP17L23D6RBM5 183 aa13.41□□□□□ -0.26
ATG4D-204ENST00000586417 TRIAP1O43715 76 aa13.41□□□□□ -0.26
ATG4D-204ENST00000586417 PSMB2P49721 201 aa13.41□□□□□ -0.26
ATG4D-204ENST00000586417 LYRM7Q5U5X0 104 aa13.41□□□□□ -0.26
ATG4D-204ENST00000586417 TRAV13-2A0A0B4J235 113 aa13.4□□□□□ -0.26
ATG4D-204ENST00000586417 DNAH2Q9P225 4427 aa13.4□□□□□ -0.27
ATG4D-204ENST00000586417 H3BMG7 143 aa13.38□□□□□ -0.27
ATG4D-204ENST00000586417 Q8NDZ9 215 aa13.38□□□□□ -0.27
ATG4D-204ENST00000586417 NDUFC2O95298 119 aa13.37□□□□□ -0.27
ATG4D-204ENST00000586417 TCL1BO95988 128 aa13.37□□□□□ -0.27
ATG4D-204ENST00000586417 SYCNQ0VAF6 134 aa13.37□□□□□ -0.27
ATG4D-204ENST00000586417 SCGB1C2P0DMR2 95 aa13.37□□□□□ -0.27
ATG4D-204ENST00000586417 SLPIP03973 132 aa13.36□□□□□ -0.27
ATG4D-204ENST00000586417 TRBV20-1A0A075B6N2 111 aa13.35□□□□□ -0.27
ATG4D-204ENST00000586417 LECT2O14960 151 aa13.34□□□□□ -0.27
ATG4D-204ENST00000586417 PRR3P79522 188 aaKnown RBP13.34□□□□□ -0.27
ATG4D-204ENST00000586417 NDUFC2-KCTD14E9PQ53 114 aa13.33□□□□□ -0.28
ATG4D-204ENST00000586417 FRAS1Q86XX4 4008 aa13.33□□□□□ -0.28
ATG4D-204ENST00000586417 WFDC2Q14508 124 aa13.32□□□□□ -0.28
ATG4D-204ENST00000586417 Q6ZRN7 208 aaPredicted RBP13.32□□□□□ -0.28
ATG4D-204ENST00000586417 PSCAO43653 123 aa13.32□□□□□ -0.28
ATG4D-204ENST00000586417 CARD19Q96LW7 228 aa13.32□□□□□ -0.28
ATG4D-204ENST00000586417 XAGE1AQ9HD64 81 aa13.32□□□□□ -0.28
ATG4D-204ENST00000586417 COX6CP09669 75 aa13.31□□□□□ -0.28
ATG4D-204ENST00000586417 RNF151Q2KHN1 245 aa13.31□□□□□ -0.28
ATG4D-204ENST00000586417 PRO0461Q9UI25 63 aa13.31□□□□□ -0.28
ATG4D-204ENST00000586417 RYR2Q92736 4967 aa13.31□□□□□ -0.28
ATG4D-204ENST00000586417 RPL28P46779 137 aaKnown RBP13.3□□□□□ -0.28
ATG4D-204ENST00000586417 Q6ZRP5 223 aa13.3□□□□□ -0.28
ATG4D-204ENST00000586417 C1orf134Q5TEV5 83 aa13.29□□□□□ -0.28
ATG4D-204ENST00000586417 SMIM11BQ8TCY0 68 aa13.29□□□□□ -0.28
ATG4D-204ENST00000586417 OR13C6PQ8NH95 151 aa13.28□□□□□ -0.28
ATG4D-204ENST00000586417 NCR3O14931 201 aa13.27□□□□□ -0.28
ATG4D-204ENST00000586417 MTURNQ8N3F0 131 aa13.27□□□□□ -0.28
ATG4D-204ENST00000586417 CLEC2BQ92478 149 aa13.27□□□□□ -0.28
ATG4D-204ENST00000586417 F8W1H4 67 aa13.27□□□□□ -0.29
ATG4D-204ENST00000586417 TLX1NBP0CAT3 122 aa13.27□□□□□ -0.29
ATG4D-204ENST00000586417 ATXN8Q156A1 80 aa13.27□□□□□ -0.29
ATG4D-204ENST00000586417 GAGE2EQ4V326 116 aa13.25□□□□□ -0.29
ATG4D-204ENST00000586417 GAGE2DQ9UEU5 116 aa13.25□□□□□ -0.29
ATG4D-204ENST00000586417 LST1O00453 97 aa13.25□□□□□ -0.29
ATG4D-204ENST00000586417 RTL8CO15255 209 aa13.24□□□□□ -0.29
ATG4D-204ENST00000586417 TRBV10-2A0A0K0K1G8 114 aa13.23□□□□□ -0.29
ATG4D-204ENST00000586417 VPREB1P12018 145 aa13.23□□□□□ -0.29
ATG4D-204ENST00000586417 SMCPP49901 116 aaPredicted RBP13.23□□□□□ -0.29
ATG4D-204ENST00000586417 TMEM126AQ9H061 195 aa13.23□□□□□ -0.29
ATG4D-204ENST00000586417 C9orf129Q5T035 196 aaKnown RBP13.22□□□□□ -0.29
ATG4D-204ENST00000586417 RPL18AQ02543 176 aaKnown RBP13.22□□□□□ -0.29
ATG4D-204ENST00000586417 LINC01620Q4KN68 170 aa13.22□□□□□ -0.29
ATG4D-204ENST00000586417 DNAH17Q9UFH2 4485 aa13.22□□□□□ -0.29
ATG4D-204ENST00000586417 LRCOL1A6NCL2 159 aa13.2□□□□□ -0.3
ATG4D-204ENST00000586417 IGLV6-57P01721 117 aa13.2□□□□□ -0.3
ATG4D-204ENST00000586417 CNBPP62633 177 aaKnown RBP13.2□□□□□ -0.3
ATG4D-204ENST00000586417 C14orf177Q52M58 125 aa13.2□□□□□ -0.3
ATG4D-204ENST00000586417 FAM218AQ96MZ4 157 aa13.2□□□□□ -0.3
ATG4D-204ENST00000586417 RYR3Q15413 4870 aa13.19□□□□□ -0.3
ATG4D-204ENST00000586417 C9JAW5 83 aa13.19□□□□□ -0.3
ATG4D-204ENST00000586417 S100A7L2Q5SY68 101 aa13.18□□□□□ -0.3
ATG4D-204ENST00000586417 FAT2Q9NYQ8 4349 aa13.18□□□□□ -0.3
ATG4D-204ENST00000586417 TNP2Q05952 138 aa13.17□□□□□ -0.3
ATG4D-204ENST00000586417 TRBV10-3A0A0K0K1G6 114 aa13.15□□□□□ -0.3
ATG4D-204ENST00000586417 SLC25A20O43772 301 aa13.15□□□□□ -0.3
ATG4D-204ENST00000586417 HECTD4Q9Y4D8 3996 aa13.15□□□□□ -0.3
ATG4D-204ENST00000586417 A0A087WTM6 91 aa13.15□□□□□ -0.31
ATG4D-204ENST00000586417 LOC107984640A0A0U1RRK4 108 aa13.15□□□□□ -0.31
ATG4D-204ENST00000586417 H0YGX0 51 aa13.15□□□□□ -0.31
ATG4D-204ENST00000586417 M0R378 163 aa13.14□□□□□ -0.31
ATG4D-204ENST00000586417 SERTAD4-AS1Q5TG53 156 aa13.14□□□□□ -0.31
ATG4D-204ENST00000586417 PLA2G2DQ9UNK4 145 aa13.14□□□□□ -0.31
ATG4D-204ENST00000586417 TRACP01848 142 aa13.13□□□□□ -0.31
ATG4D-204ENST00000586417 ETDBQ3ZM63 59 aa13.13□□□□□ -0.31
ATG4D-204ENST00000586417 LINC01600Q96MT4 127 aa13.13□□□□□ -0.31
ATG4D-204ENST00000586417 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.12□□□□□ -0.31
ATG4D-204ENST00000586417 M0QXV9 152 aa13.12□□□□□ -0.31
ATG4D-204ENST00000586417 GAGE2BQ13066 116 aa13.12□□□□□ -0.31
ATG4D-204ENST00000586417 A0A087WYN8 130 aa13.12□□□□□ -0.31
ATG4D-204ENST00000586417 C6orf99Q4VX62 202 aa13.11□□□□□ -0.31
ATG4D-204ENST00000586417 ANKRD29Q8N6D5 301 aa13.1□□□□□ -0.31
ATG4D-204ENST00000586417 PKD1P98161 4303 aa13.1□□□□□ -0.31
ATG4D-204ENST00000586417 OCIAD2Q56VL3 154 aa13.09□□□□□ -0.31
ATG4D-204ENST00000586417 KRTAP7-1Q8IUC3 87 aa13.09□□□□□ -0.31
ATG4D-204ENST00000586417 IGLV5-37A0A075B6J1 123 aa13.09□□□□□ -0.31
ATG4D-204ENST00000586417 FAM168BA1KXE4 195 aa13.09□□□□□ -0.31
ATG4D-204ENST00000586417 FUSP35637 526 aaKnown RBP eCLIP13.09□□□□□ -0.31
ATG4D-204ENST00000586417 Q8N814 137 aa13.09□□□□□ -0.31
ATG4D-204ENST00000586417 DNAH11Q96DT5 4516 aa13.08□□□□□ -0.32
ATG4D-204ENST00000586417 TRAV23DV6A0A075B6W5 121 aa13.08□□□□□ -0.32
ATG4D-204ENST00000586417 H3BT86 120 aa13.07□□□□□ -0.32
ATG4D-204ENST00000586417 A0A096LNI7 61 aa13.07□□□□□ -0.32
ATG4D-204ENST00000586417 NKAPP1Q8N9T2 125 aa13.07□□□□□ -0.32
ATG4D-204ENST00000586417 C16orf90A8MZG2 172 aa13.06□□□□□ -0.32
ATG4D-204ENST00000586417 TEN1Q86WV5 123 aa13.06□□□□□ -0.32
ATG4D-204ENST00000586417 C7orf33Q8WU49 177 aa13.06□□□□□ -0.32
ATG4D-204ENST00000586417 C9orf163Q8N9P6 203 aa13.05□□□□□ -0.32
ATG4D-204ENST00000586417 ZNF73O43830 326 aaPredicted RBP13.03□□□□□ -0.32
ATG4D-204ENST00000586417 DIRC1Q969H9 104 aa13.02□□□□□ -0.32
ATG4D-204ENST00000586417 A0A1B0GX51 115 aa13.02□□□□□ -0.33
ATG4D-204ENST00000586417 LINC00336Q6ZUF6 198 aa13.02□□□□□ -0.33
ATG4D-204ENST00000586417 KRTAP10-2P60368 255 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms