RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-218	ENST00000583821		E9PLD3	99 aa		5.01	□□□□□ -1.61
MSI2-218	ENST00000583821	SMKR1	H3BMG3	65 aa		5.01	□□□□□ -1.61
MSI2-218	ENST00000583821		H7C423	109 aa		5.01	□□□□□ -1.61
MSI2-218	ENST00000583821		I3L3M4	83 aa		5.01	□□□□□ -1.61
MSI2-218	ENST00000583821	KRTAP15-1	Q3LI76	137 aa		5.01	□□□□□ -1.61
MSI2-218	ENST00000583821	RNASE13	Q5GAN3	156 aa	Known RBP	5.01	□□□□□ -1.61
MSI2-218	ENST00000583821	LINC01545	Q5VT33	79 aa		5.01	□□□□□ -1.61
MSI2-218	ENST00000583821	TMEM101	Q96IK0	257 aa		5.01	□□□□□ -1.61
MSI2-218	ENST00000583821	IGHV1-58	A0A0C4DH39	117 aa		5	□□□□□ -1.61
MSI2-218	ENST00000583821		A0A0J9YXV3	536 aa		5	□□□□□ -1.61
MSI2-218	ENST00000583821	TRBV6-5	A0A0K0K1A5	114 aa		5	□□□□□ -1.61
MSI2-218	ENST00000583821	MEIG1	Q5JSS6	88 aa		5	□□□□□ -1.61
MSI2-218	ENST00000583821	C2orf91	Q6ZV80	131 aa		5	□□□□□ -1.61
MSI2-218	ENST00000583821	SMIM27	A0A1W2PRY6	76 aa		4.99	□□□□□ -1.61
MSI2-218	ENST00000583821	CAMP	P49913	170 aa		4.99	□□□□□ -1.61
MSI2-218	ENST00000583821	KRTAP10-8	P60410	259 aa		4.99	□□□□□ -1.61
MSI2-218	ENST00000583821	SYCN	Q0VAF6	134 aa		4.99	□□□□□ -1.61
MSI2-218	ENST00000583821	ETDB	Q3ZM63	59 aa		4.99	□□□□□ -1.61
MSI2-218	ENST00000583821	FAM231D	Q6ZW35	169 aa		4.99	□□□□□ -1.61
MSI2-218	ENST00000583821	FAM19A2	Q8N3H0	131 aa		4.99	□□□□□ -1.61
MSI2-218	ENST00000583821	CDC42SE2	Q9NRR3	84 aa		4.99	□□□□□ -1.61
MSI2-218	ENST00000583821	IGLV4-69	A0A075B6H9	119 aa		4.98	□□□□□ -1.61
MSI2-218	ENST00000583821	TRBV20-1	A0A075B6N2	111 aa		4.98	□□□□□ -1.61
MSI2-218	ENST00000583821		A0A1W2PNN7	141 aa		4.98	□□□□□ -1.61
MSI2-218	ENST00000583821	HIGD1C	A8MV81	97 aa		4.98	□□□□□ -1.61
MSI2-218	ENST00000583821		A8MWL6	223 aa		4.98	□□□□□ -1.61
MSI2-218	ENST00000583821	MT-ATP8	P03928	68 aa		4.98	□□□□□ -1.61
MSI2-218	ENST00000583821	POLR2K	P53803	58 aa	Known RBP	4.98	□□□□□ -1.61
MSI2-218	ENST00000583821	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
MSI2-218	ENST00000583821	SS18	Q15532	418 aa		4.98	□□□□□ -1.61
MSI2-218	ENST00000583821	REG3G	Q6UW15	175 aa		4.98	□□□□□ -1.61
MSI2-218	ENST00000583821	CD164L2	Q6UWJ8	174 aa		4.98	□□□□□ -1.61
MSI2-218	ENST00000583821	SPINK6	Q6UWN8	80 aa		4.98	□□□□□ -1.61
MSI2-218	ENST00000583821	AMN1	Q8IY45	258 aa		4.98	□□□□□ -1.61
MSI2-218	ENST00000583821	NUP35	Q8NFH5	326 aa		4.98	□□□□□ -1.61
MSI2-218	ENST00000583821	PRELID3A	Q96N28	172 aa		4.98	□□□□□ -1.61
MSI2-218	ENST00000583821	KRTAP9-8	Q9BYQ0	159 aa		4.98	□□□□□ -1.61
MSI2-218	ENST00000583821	LINC00474	Q9P2X8	69 aa		4.98	□□□□□ -1.61
MSI2-218	ENST00000583821		V9GYV3	84 aa		4.98	□□□□□ -1.61
MSI2-218	ENST00000583821		A0A1B0GUT8	65 aa		4.97	□□□□□ -1.61
MSI2-218	ENST00000583821		C9JAW5	83 aa		4.97	□□□□□ -1.61
MSI2-218	ENST00000583821	MAL	P21145	153 aa		4.97	□□□□□ -1.61
MSI2-218	ENST00000583821	KIAA1644	Q3SXP7	199 aa		4.97	□□□□□ -1.61
MSI2-218	ENST00000583821		Q6ZRP5	223 aa		4.97	□□□□□ -1.61
MSI2-218	ENST00000583821	TEN1	Q86WV5	123 aa		4.97	□□□□□ -1.61
MSI2-218	ENST00000583821	PPDPF	Q9H3Y8	114 aa		4.97	□□□□□ -1.61
MSI2-218	ENST00000583821	TRAV13-1	A0A0B4J241	112 aa		4.96	□□□□□ -1.62
MSI2-218	ENST00000583821	TRBV27	A0A0K0K1C4	114 aa		4.96	□□□□□ -1.62
MSI2-218	ENST00000583821	LOC107984640	A0A0U1RRK4	108 aa		4.96	□□□□□ -1.62
MSI2-218	ENST00000583821	COX7A2L	O14548	114 aa		4.96	□□□□□ -1.62
MSI2-218	ENST00000583821	FCER1G	P30273	86 aa		4.96	□□□□□ -1.62
MSI2-218	ENST00000583821	RPL18A	Q02543	176 aa	Known RBP	4.96	□□□□□ -1.62
MSI2-218	ENST00000583821	C5orf38	Q86SI9	138 aa		4.96	□□□□□ -1.62
MSI2-218	ENST00000583821	NRAC	Q8N912	160 aa		4.96	□□□□□ -1.62
MSI2-218	ENST00000583821	OPRPN	Q99935	248 aa	Predicted RBP	4.96	□□□□□ -1.62
MSI2-218	ENST00000583821	IMUP	Q9GZP8	106 aa		4.96	□□□□□ -1.62
MSI2-218	ENST00000583821	PSORS1C2	Q9UIG4	136 aa		4.96	□□□□□ -1.62
MSI2-218	ENST00000583821	SCGB1C2	P0DMR2	95 aa		4.95	□□□□□ -1.62
MSI2-218	ENST00000583821	HBB	P68871	147 aa		4.95	□□□□□ -1.62
MSI2-218	ENST00000583821	PHF5A	Q7RTV0	110 aa	Known RBP	4.95	□□□□□ -1.62
MSI2-218	ENST00000583821	CAMK2N2	Q96S95	79 aa		4.95	□□□□□ -1.62
MSI2-218	ENST00000583821	C20orf78	Q9BR46	151 aa		4.95	□□□□□ -1.62
MSI2-218	ENST00000583821	PKIG	Q9Y2B9	76 aa		4.95	□□□□□ -1.62
MSI2-218	ENST00000583821	UBE2D4	Q9Y2X8	147 aa		4.95	□□□□□ -1.62
MSI2-218	ENST00000583821	CCDC179	H3BU77	68 aa		4.94	□□□□□ -1.62
MSI2-218	ENST00000583821	UQCRQ	O14949	82 aa		4.94	□□□□□ -1.62
MSI2-218	ENST00000583821	RPL39	P62891	51 aa	Known RBP	4.94	□□□□□ -1.62
MSI2-218	ENST00000583821	SPAG11B	Q08648	103 aa		4.94	□□□□□ -1.62
MSI2-218	ENST00000583821	MRPL51	Q4U2R6	128 aa	Known RBP	4.94	□□□□□ -1.62
MSI2-218	ENST00000583821	C9orf116	Q5BN46	136 aa	Predicted RBP	4.94	□□□□□ -1.62
MSI2-218	ENST00000583821	KRTAP11-1	Q8IUC1	163 aa		4.94	□□□□□ -1.62
MSI2-218	ENST00000583821	CEND1	Q8N111	149 aa		4.94	□□□□□ -1.62
MSI2-218	ENST00000583821	FAM104A	Q969W3	186 aa		4.94	□□□□□ -1.62
MSI2-218	ENST00000583821	PRO0461	Q9UI25	63 aa		4.94	□□□□□ -1.62
MSI2-218	ENST00000583821	FAM168B	A1KXE4	195 aa		4.93	□□□□□ -1.62
MSI2-218	ENST00000583821	VCY	O14598	125 aa		4.93	□□□□□ -1.62
MSI2-218	ENST00000583821	SEC61G	P60059	68 aa		4.93	□□□□□ -1.62
MSI2-218	ENST00000583821	SUMO2	P61956	95 aa	Known RBP	4.93	□□□□□ -1.62
MSI2-218	ENST00000583821	C1orf137	Q5JT78	98 aa		4.93	□□□□□ -1.62
MSI2-218	ENST00000583821	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.93	□□□□□ -1.62
MSI2-218	ENST00000583821	PRO0628	Q9UI54	55 aa		4.93	□□□□□ -1.62
MSI2-218	ENST00000583821		V9GYY9	64 aa		4.93	□□□□□ -1.62
MSI2-218	ENST00000583821	RIG	Q13278	110 aa		4.92	□□□□□ -1.62
MSI2-218	ENST00000583821	C10orf25	Q5T742	122 aa		4.92	□□□□□ -1.62
MSI2-218	ENST00000583821	C9orf153	Q5TBE3	101 aa		4.92	□□□□□ -1.62
MSI2-218	ENST00000583821	C3orf22	Q8N5N4	141 aa		4.92	□□□□□ -1.62
MSI2-218	ENST00000583821	C2orf48	Q96LS8	159 aa		4.92	□□□□□ -1.62
MSI2-218	ENST00000583821	TNFRSF6B	O95407	300 aa		4.91	□□□□□ -1.62
MSI2-218	ENST00000583821	TMEM258	P61165	79 aa		4.91	□□□□□ -1.62
MSI2-218	ENST00000583821	FAM104B	Q5XKR9	115 aa		4.91	□□□□□ -1.62
MSI2-218	ENST00000583821	PRR26	Q8N8Z3	221 aa		4.91	□□□□□ -1.62
MSI2-218	ENST00000583821	KIR2DL4	Q99706	377 aa		4.91	□□□□□ -1.62
MSI2-218	ENST00000583821	NHP2	Q9NX24	153 aa	Known RBP	4.91	□□□□□ -1.62
MSI2-218	ENST00000583821	FAM240A	A0A1B0GVK7	77 aa		4.9	□□□□□ -1.63
MSI2-218	ENST00000583821	ACYP1	P07311	99 aa		4.9	□□□□□ -1.63
MSI2-218	ENST00000583821	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.9	□□□□□ -1.63
MSI2-218	ENST00000583821	KRTAP7-1	Q8IUC3	87 aa		4.9	□□□□□ -1.63
MSI2-218	ENST00000583821	COPS9	Q8WXC6	57 aa		4.9	□□□□□ -1.63
MSI2-218	ENST00000583821	TIMM21	Q9BVV7	248 aa		4.9	□□□□□ -1.63
MSI2-218	ENST00000583821	SMIM2	Q9BVW6	85 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms