RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 FAT1Q14517 4588 aa6.45□□□□□ -1.38
GGA3-209ENST00000580646 C9JAW5 83 aa6.44□□□□□ -1.38
GGA3-209ENST00000580646 K7ERJ3 54 aa6.44□□□□□ -1.38
GGA3-209ENST00000580646 HERVK_113P63121 156 aa6.44□□□□□ -1.38
GGA3-209ENST00000580646 IFI27L1Q96BM0 104 aa6.44□□□□□ -1.38
GGA3-209ENST00000580646 IMUPQ9GZP8 106 aa6.44□□□□□ -1.38
GGA3-209ENST00000580646 A0A087WZ39 114 aa6.43□□□□□ -1.38
GGA3-209ENST00000580646 HIST1H4GQ99525 98 aa6.43□□□□□ -1.38
GGA3-209ENST00000580646 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.42□□□□□ -1.38
GGA3-209ENST00000580646 TINCRA0A1B0GVN0 87 aa6.42□□□□□ -1.38
GGA3-209ENST00000580646 UQCRQO14949 82 aa6.42□□□□□ -1.38
GGA3-209ENST00000580646 DPM2O94777 84 aa6.42□□□□□ -1.38
GGA3-209ENST00000580646 SMR3BP02814 79 aaPredicted RBP6.42□□□□□ -1.38
GGA3-209ENST00000580646 MALP21145 153 aa6.42□□□□□ -1.38
GGA3-209ENST00000580646 ZC2HC1BQ5TFG8 222 aa6.42□□□□□ -1.38
GGA3-209ENST00000580646 PCP2Q8IVA1 136 aa6.42□□□□□ -1.38
GGA3-209ENST00000580646 LINC01600Q96MT4 127 aa6.42□□□□□ -1.38
GGA3-209ENST00000580646 FAM30AQ9NZY2 134 aa6.42□□□□□ -1.38
GGA3-209ENST00000580646 VPS13BQ7Z7G8 4022 aa6.41□□□□□ -1.38
GGA3-209ENST00000580646 IGHV3-64A0A075B6Q5 118 aa6.41□□□□□ -1.38
GGA3-209ENST00000580646 IGLV5-45A0A087WSX0 123 aa6.41□□□□□ -1.38
GGA3-209ENST00000580646 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.41□□□□□ -1.38
GGA3-209ENST00000580646 TRAV12-1A0A0B4J245 112 aa6.41□□□□□ -1.38
GGA3-209ENST00000580646 TRBV7-7A0A0K0K1E9 115 aa6.41□□□□□ -1.38
GGA3-209ENST00000580646 MYMXA0A1B0GTQ4 84 aa6.41□□□□□ -1.38
GGA3-209ENST00000580646 FAM240AA0A1B0GVK7 77 aa6.41□□□□□ -1.38
GGA3-209ENST00000580646 IGKCP01834 107 aa6.41□□□□□ -1.38
GGA3-209ENST00000580646 HAMPP81172 84 aa6.41□□□□□ -1.38
GGA3-209ENST00000580646 COX6A2Q02221 97 aa6.41□□□□□ -1.38
GGA3-209ENST00000580646 C9orf153Q5TBE3 101 aa6.41□□□□□ -1.38
GGA3-209ENST00000580646 C5orf38Q86SI9 138 aa6.41□□□□□ -1.38
GGA3-209ENST00000580646 C9orf163Q8N9P6 203 aa6.41□□□□□ -1.38
GGA3-209ENST00000580646 C2orf48Q96LS8 159 aa6.41□□□□□ -1.38
GGA3-209ENST00000580646 CARD19Q96LW7 228 aa6.41□□□□□ -1.38
GGA3-209ENST00000580646 ZNF561-AS1K7EIQ3 104 aa6.4□□□□□ -1.38
GGA3-209ENST00000580646 RPL13AP40429 203 aaKnown RBP6.4□□□□□ -1.38
GGA3-209ENST00000580646 PSMB2P49721 201 aa6.4□□□□□ -1.38
GGA3-209ENST00000580646 SMCPP49901 116 aaPredicted RBP6.4□□□□□ -1.38
GGA3-209ENST00000580646 Q5VSD8 79 aa6.4□□□□□ -1.38
GGA3-209ENST00000580646 FAM19A5Q7Z5A7 132 aaPredicted RBP6.4□□□□□ -1.38
GGA3-209ENST00000580646 C3orf22Q8N5N4 141 aa6.4□□□□□ -1.38
GGA3-209ENST00000580646 A0A0J9YXV3 536 aa6.39□□□□□ -1.39
GGA3-209ENST00000580646 SLPIP03973 132 aa6.39□□□□□ -1.39
GGA3-209ENST00000580646 INAFM2P0DMQ5 153 aa6.39□□□□□ -1.39
GGA3-209ENST00000580646 PLNP26678 52 aa6.39□□□□□ -1.39
GGA3-209ENST00000580646 HIGD2BQ4VC39 106 aa6.39□□□□□ -1.39
GGA3-209ENST00000580646 ANKRD29Q8N6D5 301 aa6.39□□□□□ -1.39
GGA3-209ENST00000580646 CDKN2A-AS1Q9UH64 79 aa6.39□□□□□ -1.39
GGA3-209ENST00000580646 PKIGQ9Y2B9 76 aa6.39□□□□□ -1.39
GGA3-209ENST00000580646 IGLV4-69A0A075B6H9 119 aa6.38□□□□□ -1.39
GGA3-209ENST00000580646 FAM229AH3BQW9 127 aa6.38□□□□□ -1.39
GGA3-209ENST00000580646 SPAG11BQ08648 103 aa6.38□□□□□ -1.39
GGA3-209ENST00000580646 LINC01620Q4KN68 170 aa6.38□□□□□ -1.39
GGA3-209ENST00000580646 Q6ZSA8 131 aa6.38□□□□□ -1.39
GGA3-209ENST00000580646 LINC00526Q96FQ7 95 aa6.38□□□□□ -1.39
GGA3-209ENST00000580646 HMCN2Q8NDA2 5059 aa6.38□□□□□ -1.39
GGA3-209ENST00000580646 LOC107984156A0A0G2JMH3 177 aa6.37□□□□□ -1.39
GGA3-209ENST00000580646 F8VRH5 84 aa6.37□□□□□ -1.39
GGA3-209ENST00000580646 ACYP1P07311 99 aa6.37□□□□□ -1.39
GGA3-209ENST00000580646 TMEM258P61165 79 aa6.37□□□□□ -1.39
GGA3-209ENST00000580646 SYCNQ0VAF6 134 aa6.37□□□□□ -1.39
GGA3-209ENST00000580646 KIAA0087Q14695 138 aa6.37□□□□□ -1.39
GGA3-209ENST00000580646 ARL17AQ8IVW1 177 aa6.37□□□□□ -1.39
GGA3-209ENST00000580646 Q8IZM0 81 aa6.37□□□□□ -1.39
GGA3-209ENST00000580646 DMBT1Q9UGM3 2413 aaPredicted RBP6.37□□□□□ -1.39
GGA3-209ENST00000580646 CAMK2N2Q96S95 79 aa6.36□□□□□ -1.39
GGA3-209ENST00000580646 MRPL35Q9NZE8 188 aaKnown RBP6.36□□□□□ -1.39
GGA3-209ENST00000580646 SMIM1B2RUZ4 78 aa6.35□□□□□ -1.39
GGA3-209ENST00000580646 NDUFA1O15239 70 aa6.35□□□□□ -1.39
GGA3-209ENST00000580646 SLC25A20O43772 301 aa6.35□□□□□ -1.39
GGA3-209ENST00000580646 ZNF22P17026 224 aaPredicted RBP6.35□□□□□ -1.39
GGA3-209ENST00000580646 CXCL5P42830 114 aa6.35□□□□□ -1.39
GGA3-209ENST00000580646 TMEM170BQ5T4T1 132 aa6.35□□□□□ -1.39
GGA3-209ENST00000580646 SDIM1Q6ZPB5 146 aa6.35□□□□□ -1.39
GGA3-209ENST00000580646 IGLV5-39A0A0G2JS06 123 aa6.34□□□□□ -1.39
GGA3-209ENST00000580646 C11orf86A6NJI1 115 aa6.34□□□□□ -1.39
GGA3-209ENST00000580646 PRSS2P07478 247 aa6.34□□□□□ -1.39
GGA3-209ENST00000580646 CRYGAP11844 174 aa6.34□□□□□ -1.39
GGA3-209ENST00000580646 CIRBPQ14011 172 aaKnown RBP6.34□□□□□ -1.39
GGA3-209ENST00000580646 GAGE2AQ6NT46 116 aa6.34□□□□□ -1.39
GGA3-209ENST00000580646 Q6ZRU5 148 aa6.34□□□□□ -1.39
GGA3-209ENST00000580646 PRO0628Q9UI54 55 aa6.34□□□□□ -1.39
GGA3-209ENST00000580646 TRBV30A0A0K0K1B3 111 aa6.33□□□□□ -1.4
GGA3-209ENST00000580646 TLX1NBP0CAT3 122 aa6.33□□□□□ -1.4
GGA3-209ENST00000580646 ATXN8Q156A1 80 aa6.33□□□□□ -1.4
GGA3-209ENST00000580646 SCXQ7RTU7 201 aa6.33□□□□□ -1.4
GGA3-209ENST00000580646 SRRM2Q9UQ35 2752 aaKnown RBP6.33□□□□□ -1.4
GGA3-209ENST00000580646 IGKV2D-26A0A0A0MRZ7 120 aa6.32□□□□□ -1.4
GGA3-209ENST00000580646 C6orf226Q5I0X4 101 aa6.32□□□□□ -1.4
GGA3-209ENST00000580646 SFTA2Q6UW10 78 aa6.32□□□□□ -1.4
GGA3-209ENST00000580646 LINC00528Q8N1L1 170 aa6.32□□□□□ -1.4
GGA3-209ENST00000580646 COX7B2Q8TF08 81 aa6.32□□□□□ -1.4
GGA3-209ENST00000580646 LINC00474Q9P2X8 69 aa6.32□□□□□ -1.4
GGA3-209ENST00000580646 LOC107984640A0A0U1RRK4 108 aa6.31□□□□□ -1.4
GGA3-209ENST00000580646 TMEM223A0PJW6 202 aa6.31□□□□□ -1.4
GGA3-209ENST00000580646 H3BT86 120 aa6.31□□□□□ -1.4
GGA3-209ENST00000580646 ATOX1O00244 68 aa6.31□□□□□ -1.4
GGA3-209ENST00000580646 TRACP01848 142 aa6.31□□□□□ -1.4
GGA3-209ENST00000580646 PLA2G1BP04054 148 aaKnown RBP6.31□□□□□ -1.4
GGA3-209ENST00000580646 COX7CP15954 63 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms