RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 TGIF2-C20orf24A0A0A6YYL0 155 aa3.33□□□□□ -1.88
PPP4R1-216ENST00000580283 FAM19A1Q7Z5A9 133 aa3.33□□□□□ -1.88
PPP4R1-216ENST00000580283 LINC01561Q8N1V8 128 aa3.33□□□□□ -1.88
PPP4R1-216ENST00000580283 SPRR4Q96PI1 79 aa3.33□□□□□ -1.88
PPP4R1-216ENST00000580283 TMEM126AQ9H061 195 aa3.33□□□□□ -1.88
PPP4R1-216ENST00000580283 GNG13Q9P2W3 67 aa3.33□□□□□ -1.88
PPP4R1-216ENST00000580283 M0R378 163 aa3.32□□□□□ -1.88
PPP4R1-216ENST00000580283 HBBP68871 147 aa3.32□□□□□ -1.88
PPP4R1-216ENST00000580283 SMAGPQ0VAQ4 97 aa3.32□□□□□ -1.88
PPP4R1-216ENST00000580283 KRTAP6-3Q3LI67 103 aa3.32□□□□□ -1.88
PPP4R1-216ENST00000580283 C6orf226Q5I0X4 101 aa3.32□□□□□ -1.88
PPP4R1-216ENST00000580283 Q8IZM0 81 aa3.32□□□□□ -1.88
PPP4R1-216ENST00000580283 VCX2Q9H322 139 aa3.32□□□□□ -1.88
PPP4R1-216ENST00000580283 SPANXA1Q9NS26 97 aa3.32□□□□□ -1.88
PPP4R1-216ENST00000580283 MED9Q9NWA0 146 aa3.32□□□□□ -1.88
PPP4R1-216ENST00000580283 TOMM7Q9P0U1 55 aa3.32□□□□□ -1.88
PPP4R1-216ENST00000580283 LOC105371267A0A1B0GV96 52 aa3.31□□□□□ -1.88
PPP4R1-216ENST00000580283 MRPL51Q4U2R6 128 aaKnown RBP3.31□□□□□ -1.88
PPP4R1-216ENST00000580283 LINC00299Q6ZSB3 139 aa3.31□□□□□ -1.88
PPP4R1-216ENST00000580283 CBLN2Q8IUK8 224 aa3.31□□□□□ -1.88
PPP4R1-216ENST00000580283 Q8NDZ9 215 aa3.31□□□□□ -1.88
PPP4R1-216ENST00000580283 MANBALQ9NQG1 85 aa3.31□□□□□ -1.88
PPP4R1-216ENST00000580283 TRBV24-1A0A075B6N3 115 aa3.3□□□□□ -1.88
PPP4R1-216ENST00000580283 A0A1B0GUT8 65 aa3.3□□□□□ -1.88
PPP4R1-216ENST00000580283 UMAD1C9J7I0 102 aa3.3□□□□□ -1.88
PPP4R1-216ENST00000580283 F8VRH5 84 aa3.3□□□□□ -1.88
PPP4R1-216ENST00000580283 TCAPO15273 167 aa3.3□□□□□ -1.88
PPP4R1-216ENST00000580283 GATCO43716 136 aaKnown RBP3.3□□□□□ -1.88
PPP4R1-216ENST00000580283 GIPP09681 153 aaPredicted RBP3.3□□□□□ -1.88
PPP4R1-216ENST00000580283 S100A1P23297 94 aa3.3□□□□□ -1.88
PPP4R1-216ENST00000580283 CKS1BP61024 79 aa3.3□□□□□ -1.88
PPP4R1-216ENST00000580283 Q6ZN92 141 aa3.3□□□□□ -1.88
PPP4R1-216ENST00000580283 S100ZQ8WXG8 99 aa3.3□□□□□ -1.88
PPP4R1-216ENST00000580283 BIN3Q9NQY0 253 aa3.3□□□□□ -1.88
PPP4R1-216ENST00000580283 C9orf92A6NGG3 77 aa3.29□□□□□ -1.88
PPP4R1-216ENST00000580283 HIGD1CA8MV81 97 aa3.29□□□□□ -1.88
PPP4R1-216ENST00000580283 A8MWL6 223 aa3.29□□□□□ -1.88
PPP4R1-216ENST00000580283 ARPC5O15511 151 aa3.29□□□□□ -1.88
PPP4R1-216ENST00000580283 PDE6DO43924 150 aa3.29□□□□□ -1.88
PPP4R1-216ENST00000580283 TAGLN2P37802 199 aaKnown RBP3.29□□□□□ -1.88
PPP4R1-216ENST00000580283 RPS29P62273 56 aaKnown RBP3.29□□□□□ -1.88
PPP4R1-216ENST00000580283 COX6B2Q6YFQ2 88 aa3.29□□□□□ -1.88
PPP4R1-216ENST00000580283 FAM231DQ6ZW35 169 aa3.29□□□□□ -1.88
PPP4R1-216ENST00000580283 FAM19A3Q7Z5A8 133 aa3.29□□□□□ -1.88
PPP4R1-216ENST00000580283 C20orf78Q9BR46 151 aa3.29□□□□□ -1.88
PPP4R1-216ENST00000580283 HIGD2AQ9BW72 106 aa3.29□□□□□ -1.88
PPP4R1-216ENST00000580283 GNB1LQ9BYB4 327 aa3.29□□□□□ -1.88
PPP4R1-216ENST00000580283 NEBP20929 6669 aa3.28□□□□□ -1.88
PPP4R1-216ENST00000580283 SMLR1H3BR10 107 aa3.28□□□□□ -1.88
PPP4R1-216ENST00000580283 PPP1R2P9O14990 202 aa3.28□□□□□ -1.88
PPP4R1-216ENST00000580283 SLC25A20O43772 301 aa3.28□□□□□ -1.88
PPP4R1-216ENST00000580283 MT2AP02795 61 aa3.28□□□□□ -1.88
PPP4R1-216ENST00000580283 RAB5BP61020 215 aa3.28□□□□□ -1.88
PPP4R1-216ENST00000580283 FAM104BQ5XKR9 115 aa3.28□□□□□ -1.88
PPP4R1-216ENST00000580283 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
PPP4R1-216ENST00000580283 AMELXQ99217 191 aa3.28□□□□□ -1.88
PPP4R1-216ENST00000580283 EIF5A2Q9GZV4 153 aaKnown RBP3.28□□□□□ -1.88
PPP4R1-216ENST00000580283 CDKN2A-AS1Q9UH64 79 aa3.28□□□□□ -1.88
PPP4R1-216ENST00000580283 MUC12Q9UKN1 5478 aa3.27□□□□□ -1.89
PPP4R1-216ENST00000580283 PPP1R17O96001 155 aa3.27□□□□□ -1.89
PPP4R1-216ENST00000580283 NDUFA5Q16718 116 aa3.27□□□□□ -1.89
PPP4R1-216ENST00000580283 KRTAP19-6Q3LI70 58 aa3.27□□□□□ -1.89
PPP4R1-216ENST00000580283 NKAPP1Q8N9T2 125 aa3.27□□□□□ -1.89
PPP4R1-216ENST00000580283 TMEM141Q96I45 108 aa3.27□□□□□ -1.89
PPP4R1-216ENST00000580283 SMIM2Q9BVW6 85 aa3.27□□□□□ -1.89
PPP4R1-216ENST00000580283 NDUFA12Q9UI09 145 aa3.27□□□□□ -1.89
PPP4R1-216ENST00000580283 NPYP01303 97 aa3.26□□□□□ -1.89
PPP4R1-216ENST00000580283 MT1FP04733 61 aa3.26□□□□□ -1.89
PPP4R1-216ENST00000580283 LINC00483Q53H64 154 aa3.26□□□□□ -1.89
PPP4R1-216ENST00000580283 FAM19A2Q8N3H0 131 aa3.26□□□□□ -1.89
PPP4R1-216ENST00000580283 Q8N9L7 120 aa3.26□□□□□ -1.89
PPP4R1-216ENST00000580283 LINC00862A6NCI5 91 aa3.25□□□□□ -1.89
PPP4R1-216ENST00000580283 H0Y8G0 127 aa3.25□□□□□ -1.89
PPP4R1-216ENST00000580283 IFI27P40305 119 aaPredicted RBP3.25□□□□□ -1.89
PPP4R1-216ENST00000580283 MOBPQ13875 183 aa3.25□□□□□ -1.89
PPP4R1-216ENST00000580283 TEX43Q6ZNM6 134 aa3.25□□□□□ -1.89
PPP4R1-216ENST00000580283 SSBP3-AS1Q7Z2R9 100 aa3.25□□□□□ -1.89
PPP4R1-216ENST00000580283 SMCR5Q8TEV8 140 aa3.25□□□□□ -1.89
PPP4R1-216ENST00000580283 IGIPA6NJ69 53 aa3.24□□□□□ -1.89
PPP4R1-216ENST00000580283 D6R8Y8 96 aa3.24□□□□□ -1.89
PPP4R1-216ENST00000580283 CKS2P33552 79 aa3.24□□□□□ -1.89
PPP4R1-216ENST00000580283 IFITM2Q01629 132 aa3.24□□□□□ -1.89
PPP4R1-216ENST00000580283 ZNF345Q14585 488 aa3.24□□□□□ -1.89
PPP4R1-216ENST00000580283 BORCS7Q96B45 105 aa3.24□□□□□ -1.89
PPP4R1-216ENST00000580283 GEMIN7Q9H840 131 aaKnown RBP3.24□□□□□ -1.89
PPP4R1-216ENST00000580283 V9GYV3 84 aa3.24□□□□□ -1.89
PPP4R1-216ENST00000580283 E9PLD3 99 aa3.23□□□□□ -1.89
PPP4R1-216ENST00000580283 ERC2-IT1O76042 136 aa3.23□□□□□ -1.89
PPP4R1-216ENST00000580283 COX7B2Q8TF08 81 aa3.23□□□□□ -1.89
PPP4R1-216ENST00000580283 SND1-IT1Q9HBX3 110 aa3.23□□□□□ -1.89
PPP4R1-216ENST00000580283 PCP4L1A6NKN8 68 aa3.22□□□□□ -1.89
PPP4R1-216ENST00000580283 CXCL5P42830 114 aa3.22□□□□□ -1.89
PPP4R1-216ENST00000580283 RPL37P61927 97 aaKnown RBP3.22□□□□□ -1.89
PPP4R1-216ENST00000580283 FAM74A3Q4VXF1 159 aa3.22□□□□□ -1.89
PPP4R1-216ENST00000580283 LINC01551Q86U37 167 aa3.22□□□□□ -1.89
PPP4R1-216ENST00000580283 SLC51BQ86UW2 128 aa3.22□□□□□ -1.89
PPP4R1-216ENST00000580283 OSTCQ9NRP0 149 aa3.22□□□□□ -1.89
PPP4R1-216ENST00000580283 ZNF706Q9Y5V0 76 aaPredicted RBP3.22□□□□□ -1.89
PPP4R1-216ENST00000580283 HMSDA8MTL9 139 aa3.21□□□□□ -1.9
PPP4R1-216ENST00000580283 IGLV6-57P01721 117 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms