RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 TMEM126AQ9H061 195 aa9.38□□□□□ -0.91
VPS33B-208ENST00000574755 IGKV2D-24A0A075B6R9 120 aa9.38□□□□□ -0.91
VPS33B-208ENST00000574755 Q8NDZ9 215 aa9.38□□□□□ -0.91
VPS33B-208ENST00000574755 CAMK2N2Q96S95 79 aa9.38□□□□□ -0.91
VPS33B-208ENST00000574755 DNAH10OSP0CZ25 163 aa9.37□□□□□ -0.91
VPS33B-208ENST00000574755 HUWE1Q7Z6Z7 4374 aaKnown RBP9.37□□□□□ -0.91
VPS33B-208ENST00000574755 C15orf56Q8N910 161 aa9.36□□□□□ -0.91
VPS33B-208ENST00000574755 LECT2O14960 151 aa9.36□□□□□ -0.91
VPS33B-208ENST00000574755 S100A7L2Q5SY68 101 aa9.36□□□□□ -0.91
VPS33B-208ENST00000574755 LINC00588Q9Y4M8 146 aa9.35□□□□□ -0.91
VPS33B-208ENST00000574755 MDFIQ99750 246 aa9.34□□□□□ -0.91
VPS33B-208ENST00000574755 XAGE1AQ9HD64 81 aa9.34□□□□□ -0.91
VPS33B-208ENST00000574755 XGP55808 180 aa9.34□□□□□ -0.91
VPS33B-208ENST00000574755 Q6ZRU5 148 aa9.33□□□□□ -0.92
VPS33B-208ENST00000574755 RPL18AQ02543 176 aaKnown RBP9.32□□□□□ -0.92
VPS33B-208ENST00000574755 C2orf48Q96LS8 159 aa9.32□□□□□ -0.92
VPS33B-208ENST00000574755 C22orf24Q9Y442 160 aa9.32□□□□□ -0.92
VPS33B-208ENST00000574755 MT-ATP8P03928 68 aa9.31□□□□□ -0.92
VPS33B-208ENST00000574755 C6orf99Q4VX62 202 aa9.31□□□□□ -0.92
VPS33B-208ENST00000574755 COL7A1Q02388 2944 aa9.3□□□□□ -0.92
VPS33B-208ENST00000574755 SLPIP03973 132 aa9.29□□□□□ -0.92
VPS33B-208ENST00000574755 NDUFC2-KCTD14E9PQ53 114 aa9.29□□□□□ -0.92
VPS33B-208ENST00000574755 SCGB1A1P11684 91 aa9.29□□□□□ -0.92
VPS33B-208ENST00000574755 FAM240AA0A1B0GVK7 77 aa9.28□□□□□ -0.92
VPS33B-208ENST00000574755 IGLV6-57P01721 117 aa9.28□□□□□ -0.92
VPS33B-208ENST00000574755 A0A1B0GX51 115 aa9.28□□□□□ -0.92
VPS33B-208ENST00000574755 Q8N814 137 aa9.28□□□□□ -0.92
VPS33B-208ENST00000574755 ORMDL1Q9P0S3 153 aa9.28□□□□□ -0.92
VPS33B-208ENST00000574755 INAFM2P0DMQ5 153 aa9.27□□□□□ -0.93
VPS33B-208ENST00000574755 SYCNQ0VAF6 134 aa9.27□□□□□ -0.93
VPS33B-208ENST00000574755 F8WDY8 70 aa9.27□□□□□ -0.93
VPS33B-208ENST00000574755 GAGE2EQ4V326 116 aa9.27□□□□□ -0.93
VPS33B-208ENST00000574755 GAGE2DQ9UEU5 116 aa9.27□□□□□ -0.93
VPS33B-208ENST00000574755 TRBV10-3A0A0K0K1G6 114 aa9.26□□□□□ -0.93
VPS33B-208ENST00000574755 SNCGO76070 127 aa9.26□□□□□ -0.93
VPS33B-208ENST00000574755 UPK3BQ9BT76 320 aa9.26□□□□□ -0.93
VPS33B-208ENST00000574755 STAB2Q8WWQ8 2551 aa9.25□□□□□ -0.93
VPS33B-208ENST00000574755 Q6ZRP5 223 aa9.25□□□□□ -0.93
VPS33B-208ENST00000574755 C9orf129Q5T035 196 aaKnown RBP9.24□□□□□ -0.93
VPS33B-208ENST00000574755 LINC00167Q96N53 147 aa9.24□□□□□ -0.93
VPS33B-208ENST00000574755 TRAV23DV6A0A075B6W5 121 aa9.24□□□□□ -0.93
VPS33B-208ENST00000574755 VPREB1P12018 145 aa9.24□□□□□ -0.93
VPS33B-208ENST00000574755 RMI2Q96E14 147 aa9.24□□□□□ -0.93
VPS33B-208ENST00000574755 ACYP1P07311 99 aa9.23□□□□□ -0.93
VPS33B-208ENST00000574755 LINC00575Q6W349 94 aa9.23□□□□□ -0.93
VPS33B-208ENST00000574755 USP17L23D6RBM5 183 aa9.22□□□□□ -0.93
VPS33B-208ENST00000574755 CASC10Q5T4H9 136 aa9.22□□□□□ -0.93
VPS33B-208ENST00000574755 B9D2Q9BPU9 175 aa9.22□□□□□ -0.93
VPS33B-208ENST00000574755 C14orf132Q9NPU4 83 aa9.22□□□□□ -0.93
VPS33B-208ENST00000574755 GAGE2AQ6NT46 116 aa9.21□□□□□ -0.93
VPS33B-208ENST00000574755 DIRC1Q969H9 104 aa9.21□□□□□ -0.93
VPS33B-208ENST00000574755 A0A1B0GV72 72 aa9.21□□□□□ -0.94
VPS33B-208ENST00000574755 hADV29S1A0JD25 119 aa9.21□□□□□ -0.94
VPS33B-208ENST00000574755 TMEM256-PLSCR3K7ERE1 68 aa9.21□□□□□ -0.94
VPS33B-208ENST00000574755 TTC32Q5I0X7 151 aa9.21□□□□□ -0.94
VPS33B-208ENST00000574755 DNAH9Q9NYC9 4486 aa9.2□□□□□ -0.94
VPS33B-208ENST00000574755 M0R378 163 aa9.2□□□□□ -0.94
VPS33B-208ENST00000574755 OBSCN-AS1Q96MR7 158 aa9.2□□□□□ -0.94
VPS33B-208ENST00000574755 ZNF73O43830 326 aaPredicted RBP9.2□□□□□ -0.94
VPS33B-208ENST00000574755 DNAH1Q9P2D7 4330 aa9.19□□□□□ -0.94
VPS33B-208ENST00000574755 LYSTQ99698 3801 aa9.19□□□□□ -0.94
VPS33B-208ENST00000574755 UBE2DNLQ8IWF7 75 aa9.17□□□□□ -0.94
VPS33B-208ENST00000574755 TLX1NBP0CAT3 122 aa9.16□□□□□ -0.94
VPS33B-208ENST00000574755 GAGE2BQ13066 116 aa9.16□□□□□ -0.94
VPS33B-208ENST00000574755 JMJD7-PLA2G4BH0Y9G9 81 aa9.16□□□□□ -0.94
VPS33B-208ENST00000574755 DNHD1Q96M86 4753 aa9.16□□□□□ -0.94
VPS33B-208ENST00000574755 COX7BP24311 80 aa9.15□□□□□ -0.94
VPS33B-208ENST00000574755 NKAPP1Q8N9T2 125 aa9.15□□□□□ -0.94
VPS33B-208ENST00000574755 SMCR5Q8TEV8 140 aa9.15□□□□□ -0.94
VPS33B-208ENST00000574755 APLNQ9ULZ1 77 aa9.15□□□□□ -0.94
VPS33B-208ENST00000574755 ELOF1P60002 83 aaKnown RBP9.15□□□□□ -0.95
VPS33B-208ENST00000574755 Q6ZQY7 126 aa9.15□□□□□ -0.95
VPS33B-208ENST00000574755 KRTAP1-5Q9BYS1 174 aa9.14□□□□□ -0.95
VPS33B-208ENST00000574755 SERTAD4-AS1Q5TG53 156 aa9.14□□□□□ -0.95
VPS33B-208ENST00000574755 TRBV7-6A0A0J9YX20 115 aa9.13□□□□□ -0.95
VPS33B-208ENST00000574755 Q6Q795 121 aa9.12□□□□□ -0.95
VPS33B-208ENST00000574755 SDIM1Q6ZPB5 146 aa9.12□□□□□ -0.95
VPS33B-208ENST00000574755 LINC00643Q86TS7 51 aa9.12□□□□□ -0.95
VPS33B-208ENST00000574755 CSMD3Q7Z407 3707 aa9.11□□□□□ -0.95
VPS33B-208ENST00000574755 PSCAO43653 123 aa9.1□□□□□ -0.95
VPS33B-208ENST00000574755 C7orf33Q8WU49 177 aa9.1□□□□□ -0.95
VPS33B-208ENST00000574755 LAMTOR3Q9UHA4 124 aa9.1□□□□□ -0.95
VPS33B-208ENST00000574755 CCKP06307 115 aa9.1□□□□□ -0.95
VPS33B-208ENST00000574755 PLA2G2DQ9UNK4 145 aa9.1□□□□□ -0.95
VPS33B-208ENST00000574755 FAM168BA1KXE4 195 aa9.09□□□□□ -0.95
VPS33B-208ENST00000574755 NHLRC4P0CG21 123 aaPredicted RBP9.09□□□□□ -0.95
VPS33B-208ENST00000574755 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.09□□□□□ -0.95
VPS33B-208ENST00000574755 LINC00528Q8N1L1 170 aa9.09□□□□□ -0.95
VPS33B-208ENST00000574755 TENM2Q9NT68 2774 aa9.09□□□□□ -0.95
VPS33B-208ENST00000574755 TRBV7-7A0A0K0K1E9 115 aa9.08□□□□□ -0.96
VPS33B-208ENST00000574755 LOC107984640A0A0U1RRK4 108 aa9.08□□□□□ -0.96
VPS33B-208ENST00000574755 H3BQ85 93 aa9.08□□□□□ -0.96
VPS33B-208ENST00000574755 KCNQ1DNQ9H478 68 aa9.08□□□□□ -0.96
VPS33B-208ENST00000574755 LINC00846Q9NV44 126 aa9.08□□□□□ -0.96
VPS33B-208ENST00000574755 NUPR2A6NF83 97 aa9.08□□□□□ -0.96
VPS33B-208ENST00000574755 RBM3P98179 157 aaKnown RBP9.08□□□□□ -0.96
VPS33B-208ENST00000574755 DNAH10Q8IVF4 4471 aa9.07□□□□□ -0.96
VPS33B-208ENST00000574755 GHRHP01286 108 aa9.07□□□□□ -0.96
VPS33B-208ENST00000574755 RPL37AP8A6NKH3 93 aa9.06□□□□□ -0.96
VPS33B-208ENST00000574755 DYNC2H1Q8NCM8 4307 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms