RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 NTN5Q8WTR8 489 aaPredicted RBP3.62□□□□□ -1.83
SF3B3-213ENST00000569687 CLEC2BQ92478 149 aa3.62□□□□□ -1.83
SF3B3-213ENST00000569687 SIGMAR1Q99720 223 aa3.62□□□□□ -1.83
SF3B3-213ENST00000569687 DNAH9Q9NYC9 4486 aa3.61□□□□□ -1.83
SF3B3-213ENST00000569687 CRPP02741 224 aa3.61□□□□□ -1.83
SF3B3-213ENST00000569687 NANOS2P60321 138 aaKnown RBP3.61□□□□□ -1.83
SF3B3-213ENST00000569687 SMIM11BQ8TCY0 68 aa3.61□□□□□ -1.83
SF3B3-213ENST00000569687 TRAV10A0A0B4J240 114 aa3.6□□□□□ -1.83
SF3B3-213ENST00000569687 A0A1B0GX51 115 aa3.6□□□□□ -1.83
SF3B3-213ENST00000569687 DNAH10OSP0CZ25 163 aa3.6□□□□□ -1.83
SF3B3-213ENST00000569687 SCGB1A1P11684 91 aa3.6□□□□□ -1.83
SF3B3-213ENST00000569687 SPAG11BQ08648 103 aa3.6□□□□□ -1.83
SF3B3-213ENST00000569687 C10orf25Q5T742 122 aa3.6□□□□□ -1.83
SF3B3-213ENST00000569687 UNQ6190/PRO20217Q6UXQ8 127 aa3.6□□□□□ -1.83
SF3B3-213ENST00000569687 WFDC10BQ8IUB3 73 aa3.6□□□□□ -1.83
SF3B3-213ENST00000569687 C15orf53Q8NAA6 179 aa3.6□□□□□ -1.83
SF3B3-213ENST00000569687 UBE2WQ96B02 151 aa3.6□□□□□ -1.83
SF3B3-213ENST00000569687 C2orf48Q96LS8 159 aa3.6□□□□□ -1.83
SF3B3-213ENST00000569687 TMEM126AQ9H061 195 aa3.6□□□□□ -1.83
SF3B3-213ENST00000569687 DNAH7Q8WXX0 4024 aa3.6□□□□□ -1.83
SF3B3-213ENST00000569687 BAALC-AS2P0C853 105 aa3.59□□□□□ -1.83
SF3B3-213ENST00000569687 FAM218AQ96MZ4 157 aa3.59□□□□□ -1.83
SF3B3-213ENST00000569687 C22orf24Q9Y442 160 aa3.59□□□□□ -1.83
SF3B3-213ENST00000569687 DYNC2H1Q8NCM8 4307 aaKnown RBP3.58□□□□□ -1.84
SF3B3-213ENST00000569687 TEX49A0A1B0GTD5 131 aa3.58□□□□□ -1.84
SF3B3-213ENST00000569687 FAM240AA0A1B0GVK7 77 aa3.58□□□□□ -1.84
SF3B3-213ENST00000569687 C9orf116Q5BN46 136 aaPredicted RBP3.58□□□□□ -1.84
SF3B3-213ENST00000569687 C6orf223Q8N319 242 aa3.58□□□□□ -1.84
SF3B3-213ENST00000569687 OR13C6PQ8NH95 151 aa3.58□□□□□ -1.84
SF3B3-213ENST00000569687 LINC00167Q96N53 147 aa3.58□□□□□ -1.84
SF3B3-213ENST00000569687 C6orf48Q9UBA6 75 aa3.58□□□□□ -1.84
SF3B3-213ENST00000569687 PRKDCP78527 4128 aaKnown RBP3.58□□□□□ -1.84
SF3B3-213ENST00000569687 NBEAL1Q6ZS30 2694 aa3.57□□□□□ -1.84
SF3B3-213ENST00000569687 IGLV6-57P01721 117 aa3.57□□□□□ -1.84
SF3B3-213ENST00000569687 ACYP1P07311 99 aa3.57□□□□□ -1.84
SF3B3-213ENST00000569687 PRR3P79522 188 aaKnown RBP3.57□□□□□ -1.84
SF3B3-213ENST00000569687 MRAPQ8TCY5 172 aa3.57□□□□□ -1.84
SF3B3-213ENST00000569687 LINC00476Q8WZB0 136 aa3.57□□□□□ -1.84
SF3B3-213ENST00000569687 OBSCN-AS1Q96MR7 158 aa3.57□□□□□ -1.84
SF3B3-213ENST00000569687 UPK3BQ9BT76 320 aa3.57□□□□□ -1.84
SF3B3-213ENST00000569687 TENM3Q9P273 2699 aa3.57□□□□□ -1.84
SF3B3-213ENST00000569687 TRBV7-6A0A0J9YX20 115 aa3.56□□□□□ -1.84
SF3B3-213ENST00000569687 NHLRC4P0CG21 123 aaPredicted RBP3.56□□□□□ -1.84
SF3B3-213ENST00000569687 C15orf56Q8N910 161 aa3.56□□□□□ -1.84
SF3B3-213ENST00000569687 Q8NDZ9 215 aa3.56□□□□□ -1.84
SF3B3-213ENST00000569687 LINC00526Q96FQ7 95 aa3.56□□□□□ -1.84
SF3B3-213ENST00000569687 B9D2Q9BPU9 175 aa3.56□□□□□ -1.84
SF3B3-213ENST00000569687 LINC00588Q9Y4M8 146 aa3.56□□□□□ -1.84
SF3B3-213ENST00000569687 NOTCH1P46531 2555 aa3.56□□□□□ -1.84
SF3B3-213ENST00000569687 A0A087WYN8 130 aa3.55□□□□□ -1.84
SF3B3-213ENST00000569687 NDUFC2-KCTD14E9PQ53 114 aa3.55□□□□□ -1.84
SF3B3-213ENST00000569687 H3BQ85 93 aa3.55□□□□□ -1.84
SF3B3-213ENST00000569687 SNCGO76070 127 aa3.55□□□□□ -1.84
SF3B3-213ENST00000569687 DNAL4O96015 105 aa3.55□□□□□ -1.84
SF3B3-213ENST00000569687 TLX1NBP0CAT3 122 aa3.55□□□□□ -1.84
SF3B3-213ENST00000569687 INAFM2P0DMQ5 153 aa3.55□□□□□ -1.84
SF3B3-213ENST00000569687 LINC00575Q6W349 94 aa3.55□□□□□ -1.84
SF3B3-213ENST00000569687 SDIM1Q6ZPB5 146 aa3.55□□□□□ -1.84
SF3B3-213ENST00000569687 Q8N814 137 aa3.55□□□□□ -1.84
SF3B3-213ENST00000569687 CAMK2N2Q96S95 79 aa3.55□□□□□ -1.84
SF3B3-213ENST00000569687 MGAM2Q2M2H8 2515 aa3.55□□□□□ -1.84
SF3B3-213ENST00000569687 DNAH1Q9P2D7 4330 aa3.55□□□□□ -1.84
SF3B3-213ENST00000569687 IGKV2D-24A0A075B6R9 120 aa3.54□□□□□ -1.84
SF3B3-213ENST00000569687 M0R378 163 aa3.54□□□□□ -1.84
SF3B3-213ENST00000569687 LECT2O14960 151 aa3.54□□□□□ -1.84
SF3B3-213ENST00000569687 XGP55808 180 aa3.54□□□□□ -1.84
SF3B3-213ENST00000569687 SYCNQ0VAF6 134 aa3.54□□□□□ -1.84
SF3B3-213ENST00000569687 S100A7L2Q5SY68 101 aa3.54□□□□□ -1.84
SF3B3-213ENST00000569687 Q6Q795 121 aa3.54□□□□□ -1.84
SF3B3-213ENST00000569687 Q6ZRU5 148 aa3.54□□□□□ -1.84
SF3B3-213ENST00000569687 RMI2Q96E14 147 aa3.54□□□□□ -1.84
SF3B3-213ENST00000569687 Q9HAA7 133 aa3.54□□□□□ -1.84
SF3B3-213ENST00000569687 ORMDL1Q9P0S3 153 aa3.54□□□□□ -1.84
SF3B3-213ENST00000569687 MEGF8Q7Z7M0 2845 aa3.53□□□□□ -1.84
SF3B3-213ENST00000569687 TMEM256-PLSCR3K7ERE1 68 aa3.53□□□□□ -1.84
SF3B3-213ENST00000569687 MT-ATP8P03928 68 aa3.53□□□□□ -1.84
SF3B3-213ENST00000569687 HIGD2BQ4VC39 106 aa3.53□□□□□ -1.84
SF3B3-213ENST00000569687 C6orf99Q4VX62 202 aa3.53□□□□□ -1.84
SF3B3-213ENST00000569687 LYSTQ99698 3801 aa3.53□□□□□ -1.84
SF3B3-213ENST00000569687 JMJD7-PLA2G4BH0Y9G9 81 aa3.52□□□□□ -1.85
SF3B3-213ENST00000569687 NCR3O14931 201 aa3.52□□□□□ -1.85
SF3B3-213ENST00000569687 SLPIP03973 132 aa3.52□□□□□ -1.85
SF3B3-213ENST00000569687 RPL18AQ02543 176 aaKnown RBP3.52□□□□□ -1.85
SF3B3-213ENST00000569687 XAGE1AQ9HD64 81 aa3.52□□□□□ -1.85
SF3B3-213ENST00000569687 COL7A1Q02388 2944 aa3.52□□□□□ -1.85
SF3B3-213ENST00000569687 CSMD3Q7Z407 3707 aa3.52□□□□□ -1.85
SF3B3-213ENST00000569687 IGLV5-37A0A075B6J1 123 aa3.51□□□□□ -1.85
SF3B3-213ENST00000569687 TRBV10-3A0A0K0K1G6 114 aa3.51□□□□□ -1.85
SF3B3-213ENST00000569687 hADV29S1A0JD25 119 aa3.51□□□□□ -1.85
SF3B3-213ENST00000569687 PLECQ15149 4684 aaKnown RBP3.51□□□□□ -1.85
SF3B3-213ENST00000569687 Q6ZRP5 223 aa3.51□□□□□ -1.85
SF3B3-213ENST00000569687 LINC00643Q86TS7 51 aa3.51□□□□□ -1.85
SF3B3-213ENST00000569687 IMUPQ9GZP8 106 aa3.51□□□□□ -1.85
SF3B3-213ENST00000569687 APLNQ9ULZ1 77 aa3.51□□□□□ -1.85
SF3B3-213ENST00000569687 STARD9Q9P2P6 4700 aa3.51□□□□□ -1.85
SF3B3-213ENST00000569687 TRAV23DV6A0A075B6W5 121 aa3.5□□□□□ -1.85
SF3B3-213ENST00000569687 TRBV7-7A0A0K0K1E9 115 aa3.5□□□□□ -1.85
SF3B3-213ENST00000569687 ZNF73O43830 326 aaPredicted RBP3.5□□□□□ -1.85
SF3B3-213ENST00000569687 CCKP06307 115 aa3.5□□□□□ -1.85
SF3B3-213ENST00000569687 COX7BP24311 80 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms