RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 PCP2Q8IVA1 136 aa10.18□□□□□ -0.78
USB1-215ENST00000569252 MIR7-3HGQ8N6C7 128 aa10.18□□□□□ -0.78
USB1-215ENST00000569252 CIRBP-AS1Q8TBR5 109 aa10.18□□□□□ -0.78
USB1-215ENST00000569252 TTTY13Q9BZ97 58 aa10.18□□□□□ -0.78
USB1-215ENST00000569252 PANO1I0J062 215 aa10.17□□□□□ -0.78
USB1-215ENST00000569252 RPL24P83731 157 aaKnown RBP10.17□□□□□ -0.78
USB1-215ENST00000569252 SCXQ7RTU7 201 aa10.17□□□□□ -0.78
USB1-215ENST00000569252 SND1-IT1Q9HBX3 110 aa10.17□□□□□ -0.78
USB1-215ENST00000569252 DNAH8Q96JB1 4490 aa10.17□□□□□ -0.78
USB1-215ENST00000569252 TMEM238C9JI98 176 aa10.16□□□□□ -0.78
USB1-215ENST00000569252 TIMM17BO60830 172 aa10.16□□□□□ -0.78
USB1-215ENST00000569252 C9orf129Q5T035 196 aaKnown RBP10.16□□□□□ -0.78
USB1-215ENST00000569252 FAM19A5Q7Z5A7 132 aaPredicted RBP10.15□□□□□ -0.78
USB1-215ENST00000569252 COPS9Q8WXC6 57 aa10.15□□□□□ -0.78
USB1-215ENST00000569252 PLAC8Q9NZF1 115 aa10.15□□□□□ -0.78
USB1-215ENST00000569252 COX8AP10176 69 aa10.14□□□□□ -0.79
USB1-215ENST00000569252 C7orf33Q8WU49 177 aa10.14□□□□□ -0.79
USB1-215ENST00000569252 A0A1W2PNN7 141 aa10.13□□□□□ -0.79
USB1-215ENST00000569252 LBHQ53QV2 105 aaPredicted RBP10.13□□□□□ -0.79
USB1-215ENST00000569252 DAND5Q8N907 189 aa10.13□□□□□ -0.79
USB1-215ENST00000569252 NKAPP1Q8N9T2 125 aa10.13□□□□□ -0.79
USB1-215ENST00000569252 C14orf144Q96I85 54 aa10.13□□□□□ -0.79
USB1-215ENST00000569252 FAM168BA1KXE4 195 aa10.12□□□□□ -0.79
USB1-215ENST00000569252 SRSF9Q13242 221 aaKnown RBP eCLIP10.12□□□□□ -0.79
USB1-215ENST00000569252 BOD1L2Q8IYS8 172 aa10.12□□□□□ -0.79
USB1-215ENST00000569252 PLA2G2DQ9UNK4 145 aa10.12□□□□□ -0.79
USB1-215ENST00000569252 LOC105371267A0A1B0GV96 52 aa10.11□□□□□ -0.79
USB1-215ENST00000569252 DLEU1O43261 78 aa10.11□□□□□ -0.79
USB1-215ENST00000569252 SLC25A34Q6PIV7 304 aa10.11□□□□□ -0.79
USB1-215ENST00000569252 Q6ZVH6 145 aa10.11□□□□□ -0.79
USB1-215ENST00000569252 FAM229AH3BQW9 127 aa10.1□□□□□ -0.79
USB1-215ENST00000569252 M0QXV9 152 aa10.1□□□□□ -0.79
USB1-215ENST00000569252 SMIM6P0DI80 62 aa10.1□□□□□ -0.79
USB1-215ENST00000569252 NPC2P61916 151 aa10.1□□□□□ -0.79
USB1-215ENST00000569252 ADAMTSL4-AS1Q5T5F5 129 aa10.1□□□□□ -0.79
USB1-215ENST00000569252 C22orf24Q9Y442 160 aa10.1□□□□□ -0.79
USB1-215ENST00000569252 UBE2BP63146 152 aa10.09□□□□□ -0.79
USB1-215ENST00000569252 SPANXDQ9BXN6 97 aa10.09□□□□□ -0.79
USB1-215ENST00000569252 SPANXCQ9NY87 97 aa10.09□□□□□ -0.79
USB1-215ENST00000569252 UBR4Q5T4S7 5183 aa10.08□□□□□ -0.8
USB1-215ENST00000569252 LRP1Q07954 4544 aaKnown RBP10.08□□□□□ -0.8
USB1-215ENST00000569252 IFITM1P13164 125 aa10.08□□□□□ -0.8
USB1-215ENST00000569252 SERTAD4-AS1Q5TG53 156 aa10.08□□□□□ -0.8
USB1-215ENST00000569252 HMCN2Q8NDA2 5059 aa10.07□□□□□ -0.8
USB1-215ENST00000569252 PHF5AQ7RTV0 110 aaKnown RBP10.07□□□□□ -0.8
USB1-215ENST00000569252 MRPL55Q7Z7F7 128 aaKnown RBP10.07□□□□□ -0.8
USB1-215ENST00000569252 LINC00308Q8TCZ7 52 aa10.07□□□□□ -0.8
USB1-215ENST00000569252 TP73-AS1Q9UF72 201 aa10.07□□□□□ -0.8
USB1-215ENST00000569252 LOC107984156A0A0G2JMH3 177 aa10.06□□□□□ -0.8
USB1-215ENST00000569252 ARL17AQ8IVW1 177 aa10.06□□□□□ -0.8
USB1-215ENST00000569252 LITAFQ99732 161 aa10.06□□□□□ -0.8
USB1-215ENST00000569252 IGLV5-37A0A075B6J1 123 aa10.05□□□□□ -0.8
USB1-215ENST00000569252 LINC00528Q8N1L1 170 aa10.05□□□□□ -0.8
USB1-215ENST00000569252 HIST1H4GQ99525 98 aa10.05□□□□□ -0.8
USB1-215ENST00000569252 SPANXB1Q9NS25 103 aaPredicted RBP10.05□□□□□ -0.8
USB1-215ENST00000569252 J3QL48 77 aa10.04□□□□□ -0.8
USB1-215ENST00000569252 M0R378 163 aa10.04□□□□□ -0.8
USB1-215ENST00000569252 NDUFC2O95298 119 aa10.04□□□□□ -0.8
USB1-215ENST00000569252 VPREB1P12018 145 aa10.04□□□□□ -0.8
USB1-215ENST00000569252 GAGE10A6NGK3 116 aa10.03□□□□□ -0.8
USB1-215ENST00000569252 PLA2G1BP04054 148 aaKnown RBP10.03□□□□□ -0.8
USB1-215ENST00000569252 MUSTN1Q8IVN3 82 aa10.03□□□□□ -0.8
USB1-215ENST00000569252 UQCR10Q9UDW1 63 aa10.03□□□□□ -0.8
USB1-215ENST00000569252 NCR3O14931 201 aa10.02□□□□□ -0.81
USB1-215ENST00000569252 S100A7L2Q5SY68 101 aa10.02□□□□□ -0.81
USB1-215ENST00000569252 LINC00518Q8N0U6 118 aa10.02□□□□□ -0.81
USB1-215ENST00000569252 LINC00167Q96N53 147 aa10.02□□□□□ -0.81
USB1-215ENST00000569252 HIGD1BQ9P298 99 aa10.02□□□□□ -0.81
USB1-215ENST00000569252 RPL37AP8A6NKH3 93 aa10.01□□□□□ -0.81
USB1-215ENST00000569252 RPL37AP61513 92 aaKnown RBP10.01□□□□□ -0.81
USB1-215ENST00000569252 PRR3P79522 188 aaKnown RBP10.01□□□□□ -0.81
USB1-215ENST00000569252 KRTAP7-1Q8IUC3 87 aa10.01□□□□□ -0.81
USB1-215ENST00000569252 TRBV10-2A0A0K0K1G8 114 aa10□□□□□ -0.81
USB1-215ENST00000569252 SOSTDC1Q6X4U4 206 aa10□□□□□ -0.81
USB1-215ENST00000569252 C12orf57Q99622 126 aa10□□□□□ -0.81
USB1-215ENST00000569252 PPDPFQ9H3Y8 114 aa10□□□□□ -0.81
USB1-215ENST00000569252 FAT3Q8TDW7 4589 aa10□□□□□ -0.81
USB1-215ENST00000569252 CBY1Q9Y3M2 126 aa9.99□□□□□ -0.81
USB1-215ENST00000569252 OR13C6PQ8NH95 151 aa9.98□□□□□ -0.81
USB1-215ENST00000569252 IGKV2-28A0A075B6P5 120 aa9.97□□□□□ -0.81
USB1-215ENST00000569252 IGKV2D-28P01615 120 aa9.97□□□□□ -0.81
USB1-215ENST00000569252 C1orf137Q5JT78 98 aa9.97□□□□□ -0.81
USB1-215ENST00000569252 Q8NDZ9 215 aa9.97□□□□□ -0.81
USB1-215ENST00000569252 IGLV1-50A0A075B6I6 118 aa9.96□□□□□ -0.82
USB1-215ENST00000569252 TSTD3H0UI37 97 aa9.96□□□□□ -0.82
USB1-215ENST00000569252 EIF4EBP3O60516 100 aaPredicted RBP9.96□□□□□ -0.82
USB1-215ENST00000569252 DDTP30046 118 aa9.96□□□□□ -0.82
USB1-215ENST00000569252 TAL2Q16559 108 aa9.96□□□□□ -0.82
USB1-215ENST00000569252 PRO1933Q9H354 126 aa9.96□□□□□ -0.82
USB1-215ENST00000569252 PSORS1C2Q9UIG4 136 aa9.96□□□□□ -0.82
USB1-215ENST00000569252 HNRNPA3P51991 378 aaKnown RBP9.95□□□□□ -0.82
USB1-215ENST00000569252 C2orf91Q6ZV80 131 aa9.95□□□□□ -0.82
USB1-215ENST00000569252 TMEM126AQ9H061 195 aa9.95□□□□□ -0.82
USB1-215ENST00000569252 TRAV13-2A0A0B4J235 113 aa9.94□□□□□ -0.82
USB1-215ENST00000569252 A6NDN8 102 aa9.94□□□□□ -0.82
USB1-215ENST00000569252 TMEM238LA0A1B0GVL6 79 aa9.93□□□□□ -0.82
USB1-215ENST00000569252 A6NJY4 79 aa9.93□□□□□ -0.82
USB1-215ENST00000569252 REG3GQ6UW15 175 aa9.93□□□□□ -0.82
USB1-215ENST00000569252 TRBV10-3A0A0K0K1G6 114 aa9.92□□□□□ -0.82
USB1-215ENST00000569252 A4D1N5 150 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms