RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 C19orf84I3L1E1 186 aa4.88□□□□□ -1.63
CNOT1-216ENST00000569240 LINC00528Q8N1L1 170 aa4.88□□□□□ -1.63
CNOT1-216ENST00000569240 PCNX1Q96RV3 2341 aa4.88□□□□□ -1.63
CNOT1-216ENST00000569240 LINC01554Q52M75 96 aa4.88□□□□□ -1.63
CNOT1-216ENST00000569240 SPINK6Q6UWN8 80 aa4.88□□□□□ -1.63
CNOT1-216ENST00000569240 KCNQ1DNQ9H478 68 aa4.88□□□□□ -1.63
CNOT1-216ENST00000569240 OCR1Q9BZK8 76 aa4.87□□□□□ -1.63
CNOT1-216ENST00000569240 C2CD3Q4AC94 2353 aa4.87□□□□□ -1.63
CNOT1-216ENST00000569240 LINC01556Q5JQF7 62 aa4.87□□□□□ -1.63
CNOT1-216ENST00000569240 C16orf95Q9H693 158 aa4.87□□□□□ -1.63
CNOT1-216ENST00000569240 LINC00476Q8WZB0 136 aa4.87□□□□□ -1.63
CNOT1-216ENST00000569240 MED13LQ71F56 2210 aa4.87□□□□□ -1.63
CNOT1-216ENST00000569240 Q9UF83 564 aa4.86□□□□□ -1.63
CNOT1-216ENST00000569240 SPEGQ15772 3267 aa4.86□□□□□ -1.63
CNOT1-216ENST00000569240 C22orf24Q9Y442 160 aa4.86□□□□□ -1.63
CNOT1-216ENST00000569240 LRP4O75096 1905 aa4.86□□□□□ -1.63
CNOT1-216ENST00000569240 PLA2G2DQ9UNK4 145 aa4.86□□□□□ -1.63
CNOT1-216ENST00000569240 GPR179Q6PRD1 2367 aa4.86□□□□□ -1.63
CNOT1-216ENST00000569240 RAI1Q7Z5J4 1906 aaPredicted RBP4.85□□□□□ -1.63
CNOT1-216ENST00000569240 MRPL34Q9BQ48 92 aaKnown RBP4.85□□□□□ -1.63
CNOT1-216ENST00000569240 IGLV9-49A0A0B4J1Y8 123 aa4.85□□□□□ -1.63
CNOT1-216ENST00000569240 DEFB4AO15263 64 aa4.85□□□□□ -1.63
CNOT1-216ENST00000569240 SPINT4Q6UDR6 99 aa4.85□□□□□ -1.63
CNOT1-216ENST00000569240 MAPK1IP1LQ8NDC0 245 aa4.85□□□□□ -1.63
CNOT1-216ENST00000569240 MDFIQ99750 246 aa4.85□□□□□ -1.63
CNOT1-216ENST00000569240 CEP192Q8TEP8 1941 aa4.84□□□□□ -1.63
CNOT1-216ENST00000569240 LINC01558Q9Y6Z2 57 aa4.84□□□□□ -1.63
CNOT1-216ENST00000569240 REV3LO60673 3130 aa4.84□□□□□ -1.63
CNOT1-216ENST00000569240 TECTAO75443 2155 aa4.84□□□□□ -1.63
CNOT1-216ENST00000569240 COL4A2P08572 1712 aa4.83□□□□□ -1.64
CNOT1-216ENST00000569240 EPM2AB3EWF7 344 aa4.83□□□□□ -1.64
CNOT1-216ENST00000569240 PHF5AQ7RTV0 110 aaKnown RBP4.83□□□□□ -1.64
CNOT1-216ENST00000569240 IGLV5-48A0A075B6I7 105 aa4.82□□□□□ -1.64
CNOT1-216ENST00000569240 K7EQZ3 153 aa4.82□□□□□ -1.64
CNOT1-216ENST00000569240 FP248Q71RG6 208 aaPredicted RBP4.82□□□□□ -1.64
CNOT1-216ENST00000569240 PTPRBP23467 1997 aa4.82□□□□□ -1.64
CNOT1-216ENST00000569240 A0A087X002 238 aa4.82□□□□□ -1.64
CNOT1-216ENST00000569240 PLA2G2AP14555 144 aa4.82□□□□□ -1.64
CNOT1-216ENST00000569240 FSHBP01225 129 aa4.81□□□□□ -1.64
CNOT1-216ENST00000569240 IGLV7-46A0A075B6I9 117 aa4.81□□□□□ -1.64
CNOT1-216ENST00000569240 CRIPTQ9P021 101 aa4.81□□□□□ -1.64
CNOT1-216ENST00000569240 CDSNQ15517 529 aa4.81□□□□□ -1.64
CNOT1-216ENST00000569240 UNC80Q8N2C7 3258 aa4.8□□□□□ -1.64
CNOT1-216ENST00000569240 J3QKU1 62 aa4.8□□□□□ -1.64
CNOT1-216ENST00000569240 LINC00588Q9Y4M8 146 aa4.8□□□□□ -1.64
CNOT1-216ENST00000569240 EIF4EBP3O60516 100 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-216ENST00000569240 ASPMQ8IZT6 3477 aa4.79□□□□□ -1.64
CNOT1-216ENST00000569240 RELNP78509 3460 aa4.79□□□□□ -1.64
CNOT1-216ENST00000569240 C10orf99Q6UWK7 81 aa4.79□□□□□ -1.64
CNOT1-216ENST00000569240 RIF1Q5UIP0 2472 aaKnown RBP4.79□□□□□ -1.64
CNOT1-216ENST00000569240 TLX1NBP0CAT3 122 aa4.79□□□□□ -1.64
CNOT1-216ENST00000569240 H3BS24 57 aa4.79□□□□□ -1.64
CNOT1-216ENST00000569240 TET2Q6N021 2002 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-216ENST00000569240 C8orf17Q9NRJ1 99 aa4.78□□□□□ -1.64
CNOT1-216ENST00000569240 Q8N9P0 234 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-216ENST00000569240 DSCAMO60469 2012 aa4.78□□□□□ -1.64
CNOT1-216ENST00000569240 PTPRSQ13332 1948 aa4.78□□□□□ -1.64
CNOT1-216ENST00000569240 NBASA2RRP1 2371 aa4.78□□□□□ -1.64
CNOT1-216ENST00000569240 FAM104AQ969W3 186 aa4.78□□□□□ -1.64
CNOT1-216ENST00000569240 DMAC1Q96GE9 116 aa4.78□□□□□ -1.64
CNOT1-216ENST00000569240 SPRR4Q96PI1 79 aa4.77□□□□□ -1.65
CNOT1-216ENST00000569240 SORL1Q92673 2214 aa4.77□□□□□ -1.65
CNOT1-216ENST00000569240 DEFB116Q30KQ4 102 aa4.77□□□□□ -1.65
CNOT1-216ENST00000569240 LINC00313P59037 77 aa4.76□□□□□ -1.65
CNOT1-216ENST00000569240 C16orf90A8MZG2 172 aa4.76□□□□□ -1.65
CNOT1-216ENST00000569240 IGLV1-50A0A075B6I6 118 aa4.76□□□□□ -1.65
CNOT1-216ENST00000569240 PRR34Q9NV39 138 aa4.76□□□□□ -1.65
CNOT1-216ENST00000569240 A0A1B0GVX0 72 aa4.76□□□□□ -1.65
CNOT1-216ENST00000569240 A0A0C4DFX4 3053 aa4.76□□□□□ -1.65
CNOT1-216ENST00000569240 NUPR2A6NF83 97 aa4.75□□□□□ -1.65
CNOT1-216ENST00000569240 C15orf56Q8N910 161 aa4.75□□□□□ -1.65
CNOT1-216ENST00000569240 CELSR3Q9NYQ7 3312 aa4.75□□□□□ -1.65
CNOT1-216ENST00000569240 SPINK1P00995 79 aa4.75□□□□□ -1.65
CNOT1-216ENST00000569240 IGLV5-37A0A075B6J1 123 aa4.75□□□□□ -1.65
CNOT1-216ENST00000569240 CIRBP-AS1Q8TBR5 109 aa4.75□□□□□ -1.65
CNOT1-216ENST00000569240 IGKV2D-30A0A075B6S6 120 aa4.75□□□□□ -1.65
CNOT1-216ENST00000569240 IGKV2-30P06310 120 aa4.75□□□□□ -1.65
CNOT1-216ENST00000569240 SSBP3-AS1Q7Z2R9 100 aa4.74□□□□□ -1.65
CNOT1-216ENST00000569240 PRLHP81277 87 aa4.74□□□□□ -1.65
CNOT1-216ENST00000569240 Q8N377 158 aa4.74□□□□□ -1.65
CNOT1-216ENST00000569240 DCHS1Q96JQ0 3298 aa4.74□□□□□ -1.65
CNOT1-216ENST00000569240 IGFL1Q6UW32 110 aa4.73□□□□□ -1.65
CNOT1-216ENST00000569240 LINC00612Q8N6U2 182 aa4.73□□□□□ -1.65
CNOT1-216ENST00000569240 PTPRQQ9UMZ3 2332 aa4.73□□□□□ -1.65
CNOT1-216ENST00000569240 ACACBO00763 2458 aa4.73□□□□□ -1.65
CNOT1-216ENST00000569240 Q5VV11 94 aa4.73□□□□□ -1.65
CNOT1-216ENST00000569240 HIVEP2P31629 2446 aa4.72□□□□□ -1.65
CNOT1-216ENST00000569240 C18orf65Q6ZTR6 163 aa4.72□□□□□ -1.65
CNOT1-216ENST00000569240 C5orf42Q9H799 3197 aa4.72□□□□□ -1.65
CNOT1-216ENST00000569240 CSPG4Q6UVK1 2322 aa4.71□□□□□ -1.65
CNOT1-216ENST00000569240 HTTP42858 3142 aa4.71□□□□□ -1.66
CNOT1-216ENST00000569240 A0A1W2PNM2 257 aa4.71□□□□□ -1.66
CNOT1-216ENST00000569240 ST20-AS1Q8NBB2 130 aa4.71□□□□□ -1.66
CNOT1-216ENST00000569240 PRO3102Q9H379 93 aa4.71□□□□□ -1.66
CNOT1-216ENST00000569240 DNAH10OSP0CZ25 163 aa4.7□□□□□ -1.66
CNOT1-216ENST00000569240 LAMA2P24043 3122 aaKnown RBP4.7□□□□□ -1.66
CNOT1-216ENST00000569240 X6R8D5 127 aa4.7□□□□□ -1.66
CNOT1-216ENST00000569240 SPENQ96T58 3664 aaKnown RBP4.69□□□□□ -1.66
CNOT1-216ENST00000569240 MUC4Q99102 2169 aa4.69□□□□□ -1.66
CNOT1-216ENST00000569240 A0A0A0MQY5 61 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms