RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 CFC1BP0CG36 223 aa6.58□□□□□ -1.36
GTF3C1-209ENST00000568569 COX17Q14061 63 aa6.58□□□□□ -1.36
GTF3C1-209ENST00000568569 FAM19A2Q8N3H0 131 aa6.58□□□□□ -1.36
GTF3C1-209ENST00000568569 CST9LQ9H4G1 147 aa6.58□□□□□ -1.36
GTF3C1-209ENST00000568569 ERG28Q9UKR5 140 aa6.58□□□□□ -1.36
GTF3C1-209ENST00000568569 XP32Q5T750 250 aa6.57□□□□□ -1.36
GTF3C1-209ENST00000568569 LINC01549A6NIU2 74 aa6.56□□□□□ -1.36
GTF3C1-209ENST00000568569 MT1HP80294 61 aa6.56□□□□□ -1.36
GTF3C1-209ENST00000568569 Q8NDZ9 215 aa6.56□□□□□ -1.36
GTF3C1-209ENST00000568569 IGLV5-39A0A0G2JS06 123 aa6.55□□□□□ -1.36
GTF3C1-209ENST00000568569 TMEM218A2RU14 115 aa6.55□□□□□ -1.36
GTF3C1-209ENST00000568569 RPS29P62273 56 aaKnown RBP6.55□□□□□ -1.36
GTF3C1-209ENST00000568569 PMVKQ15126 192 aa6.55□□□□□ -1.36
GTF3C1-209ENST00000568569 UQCC3Q6UW78 93 aa6.55□□□□□ -1.36
GTF3C1-209ENST00000568569 KRTAP19-2Q3LHN2 52 aa6.54□□□□□ -1.36
GTF3C1-209ENST00000568569 Q8N377 158 aa6.54□□□□□ -1.36
GTF3C1-209ENST00000568569 ANAPC16Q96DE5 110 aa6.53□□□□□ -1.36
GTF3C1-209ENST00000568569 SLC25A20O43772 301 aa6.52□□□□□ -1.37
GTF3C1-209ENST00000568569 MT-ND4LP03901 98 aa6.52□□□□□ -1.37
GTF3C1-209ENST00000568569 LINC00483Q53H64 154 aa6.52□□□□□ -1.37
GTF3C1-209ENST00000568569 SFTA2Q6UW10 78 aa6.52□□□□□ -1.37
GTF3C1-209ENST00000568569 ZNF625Q96I27 306 aaPredicted RBP6.52□□□□□ -1.37
GTF3C1-209ENST00000568569 PRYO14603 147 aa6.51□□□□□ -1.37
GTF3C1-209ENST00000568569 IGLC3P0DOY3 106 aa6.51□□□□□ -1.37
GTF3C1-209ENST00000568569 MOBPQ13875 183 aa6.51□□□□□ -1.37
GTF3C1-209ENST00000568569 SMCR5Q8TEV8 140 aa6.51□□□□□ -1.37
GTF3C1-209ENST00000568569 SEC11CQ9BY50 192 aa6.51□□□□□ -1.37
GTF3C1-209ENST00000568569 LINC01546A6NGU7 62 aa6.5□□□□□ -1.37
GTF3C1-209ENST00000568569 LORP23490 312 aaPredicted RBP6.5□□□□□ -1.37
GTF3C1-209ENST00000568569 KIAA1644Q3SXP7 199 aa6.5□□□□□ -1.37
GTF3C1-209ENST00000568569 IGLV9-49A0A0B4J1Y8 123 aa6.49□□□□□ -1.37
GTF3C1-209ENST00000568569 ZNF22P17026 224 aaPredicted RBP6.49□□□□□ -1.37
GTF3C1-209ENST00000568569 SPRR1AP35321 89 aa6.49□□□□□ -1.37
GTF3C1-209ENST00000568569 C10orf91Q5T1B1 145 aa6.49□□□□□ -1.37
GTF3C1-209ENST00000568569 GAGE2AQ6NT46 116 aa6.49□□□□□ -1.37
GTF3C1-209ENST00000568569 SSBP3-AS1Q7Z2R9 100 aa6.49□□□□□ -1.37
GTF3C1-209ENST00000568569 ETDCA0A1B0GVM5 59 aa6.48□□□□□ -1.37
GTF3C1-209ENST00000568569 KRTAP10-6P60371 365 aaPredicted RBP6.48□□□□□ -1.37
GTF3C1-209ENST00000568569 KRTAP4-16G5E9R7 235 aaPredicted RBP6.47□□□□□ -1.37
GTF3C1-209ENST00000568569 LINC00158P58513 81 aa6.47□□□□□ -1.37
GTF3C1-209ENST00000568569 KCNQ1DNQ9H478 68 aa6.47□□□□□ -1.37
GTF3C1-209ENST00000568569 IGLV8-61A0A075B6I0 122 aa6.46□□□□□ -1.38
GTF3C1-209ENST00000568569 NDUFA6P56556 154 aa6.46□□□□□ -1.38
GTF3C1-209ENST00000568569 RHEBQ15382 184 aa6.46□□□□□ -1.38
GTF3C1-209ENST00000568569 PCOTHQ58A44 107 aa6.46□□□□□ -1.38
GTF3C1-209ENST00000568569 SMCO4Q9NRQ5 59 aa6.46□□□□□ -1.38
GTF3C1-209ENST00000568569 FA2HQ7L5A8 372 aa6.45□□□□□ -1.38
GTF3C1-209ENST00000568569 RPS10P5Q9NQ39 176 aa6.45□□□□□ -1.38
GTF3C1-209ENST00000568569 A0A0U1RRA0 63 aa6.44□□□□□ -1.38
GTF3C1-209ENST00000568569 NCR3O14931 201 aa6.44□□□□□ -1.38
GTF3C1-209ENST00000568569 APOC3P02656 99 aa6.44□□□□□ -1.38
GTF3C1-209ENST00000568569 BOD1L2Q8IYS8 172 aa6.44□□□□□ -1.38
GTF3C1-209ENST00000568569 TRAV9-1A0A075B6T8 112 aa6.43□□□□□ -1.38
GTF3C1-209ENST00000568569 S100A12P80511 92 aa6.43□□□□□ -1.38
GTF3C1-209ENST00000568569 TMEM170BQ5T4T1 132 aa6.43□□□□□ -1.38
GTF3C1-209ENST00000568569 TRBV10-3A0A0K0K1G6 114 aa6.42□□□□□ -1.38
GTF3C1-209ENST00000568569 C11orf86A6NJI1 115 aa6.42□□□□□ -1.38
GTF3C1-209ENST00000568569 B5MCH6 92 aa6.42□□□□□ -1.38
GTF3C1-209ENST00000568569 M0R2T5 61 aa6.42□□□□□ -1.38
GTF3C1-209ENST00000568569 ATP6V1G1O75348 118 aa6.42□□□□□ -1.38
GTF3C1-209ENST00000568569 ERC2-IT1O76042 136 aa6.42□□□□□ -1.38
GTF3C1-209ENST00000568569 S100PP25815 95 aa6.42□□□□□ -1.38
GTF3C1-209ENST00000568569 C9orf153Q5TBE3 101 aa6.41□□□□□ -1.38
GTF3C1-209ENST00000568569 A0A096LNJ9 63 aa6.4□□□□□ -1.38
GTF3C1-209ENST00000568569 SMIM13P0DJ93 91 aa6.4□□□□□ -1.38
GTF3C1-209ENST00000568569 SLC7A5P1Q8MH63 180 aa6.4□□□□□ -1.38
GTF3C1-209ENST00000568569 SVBPQ8N300 66 aa6.4□□□□□ -1.38
GTF3C1-209ENST00000568569 YPEL4Q96NS1 127 aa6.4□□□□□ -1.38
GTF3C1-209ENST00000568569 KRTAP9-7A8MTY7 169 aa6.39□□□□□ -1.39
GTF3C1-209ENST00000568569 SNAPINO95295 136 aa6.39□□□□□ -1.39
GTF3C1-209ENST00000568569 MEIG1Q5JSS6 88 aa6.39□□□□□ -1.39
GTF3C1-209ENST00000568569 BAGE3Q86Y29 109 aa6.39□□□□□ -1.39
GTF3C1-209ENST00000568569 MIR7-3HGQ8N6C7 128 aa6.39□□□□□ -1.39
GTF3C1-209ENST00000568569 Q9BRP9 147 aa6.39□□□□□ -1.39
GTF3C1-209ENST00000568569 C9orf92A6NGG3 77 aa6.38□□□□□ -1.39
GTF3C1-209ENST00000568569 NDUFA5Q16718 116 aa6.38□□□□□ -1.39
GTF3C1-209ENST00000568569 Q6ZRX8 168 aa6.38□□□□□ -1.39
GTF3C1-209ENST00000568569 HBDP02042 147 aa6.37□□□□□ -1.39
GTF3C1-209ENST00000568569 LIMD2Q9BT23 127 aa6.37□□□□□ -1.39
GTF3C1-209ENST00000568569 FLGP20930 4061 aaPredicted RBP6.36□□□□□ -1.39
GTF3C1-209ENST00000568569 TMEM223A0PJW6 202 aa6.36□□□□□ -1.39
GTF3C1-209ENST00000568569 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.36□□□□□ -1.39
GTF3C1-209ENST00000568569 LINC00587B1AMM8 73 aa6.36□□□□□ -1.39
GTF3C1-209ENST00000568569 HERV-K104P63124 156 aa6.36□□□□□ -1.39
GTF3C1-209ENST00000568569 FABP9Q0Z7S8 132 aa6.36□□□□□ -1.39
GTF3C1-209ENST00000568569 COX6B2Q6YFQ2 88 aa6.36□□□□□ -1.39
GTF3C1-209ENST00000568569 URB1-AS1Q96HZ7 61 aa6.36□□□□□ -1.39
GTF3C1-209ENST00000568569 DDTP30046 118 aa6.35□□□□□ -1.39
GTF3C1-209ENST00000568569 COX19Q49B96 90 aa6.35□□□□□ -1.39
GTF3C1-209ENST00000568569 CHTOPQ9Y3Y2 248 aaKnown RBP6.35□□□□□ -1.39
GTF3C1-209ENST00000568569 TRBV10-2A0A0K0K1G8 114 aa6.34□□□□□ -1.39
GTF3C1-209ENST00000568569 LINC00614P0C842 121 aa6.34□□□□□ -1.39
GTF3C1-209ENST00000568569 JOSD1Q15040 202 aaPredicted RBP6.34□□□□□ -1.39
GTF3C1-209ENST00000568569 PMCHL1Q16048 86 aa6.34□□□□□ -1.39
GTF3C1-209ENST00000568569 C18orf32Q8TCD1 76 aa6.34□□□□□ -1.39
GTF3C1-209ENST00000568569 MAP1LC3CQ9BXW4 147 aa6.34□□□□□ -1.39
GTF3C1-209ENST00000568569 TRAPPC1Q9Y5R8 145 aa6.34□□□□□ -1.39
GTF3C1-209ENST00000568569 IGLV6-57P01721 117 aa6.33□□□□□ -1.4
GTF3C1-209ENST00000568569 SPANXB1Q9NS25 103 aaPredicted RBP6.31□□□□□ -1.4
GTF3C1-209ENST00000568569 LOC107984156A0A0G2JMH3 177 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms