RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 C15orf56Q8N910 161 aa12.09□□□□□ -0.47
SMPD3-211ENST00000568373 CDIP1Q9H305 208 aa12.09□□□□□ -0.47
SMPD3-211ENST00000568373 TMEM126AQ9H061 195 aa12.08□□□□□ -0.48
SMPD3-211ENST00000568373 A0A087WYN8 130 aa12.07□□□□□ -0.48
SMPD3-211ENST00000568373 LINC00588Q9Y4M8 146 aa12.07□□□□□ -0.48
SMPD3-211ENST00000568373 IGKV2D-24A0A075B6R9 120 aa12.07□□□□□ -0.48
SMPD3-211ENST00000568373 CAMK2N2Q96S95 79 aa12.07□□□□□ -0.48
SMPD3-211ENST00000568373 BAALC-AS2P0C853 105 aa12.06□□□□□ -0.48
SMPD3-211ENST00000568373 NCR3O14931 201 aa12.06□□□□□ -0.48
SMPD3-211ENST00000568373 Q9HAA7 133 aa12.06□□□□□ -0.48
SMPD3-211ENST00000568373 DNAL4O96015 105 aa12.04□□□□□ -0.48
SMPD3-211ENST00000568373 C2orf48Q96LS8 159 aa12.04□□□□□ -0.48
SMPD3-211ENST00000568373 A0A1B0GV72 72 aa12.03□□□□□ -0.48
SMPD3-211ENST00000568373 DNAH9Q9NYC9 4486 aa12.03□□□□□ -0.48
SMPD3-211ENST00000568373 Q6ZRU5 148 aa12.02□□□□□ -0.48
SMPD3-211ENST00000568373 S100A7L2Q5SY68 101 aa12.02□□□□□ -0.49
SMPD3-211ENST00000568373 LECT2O14960 151 aa12.01□□□□□ -0.49
SMPD3-211ENST00000568373 C22orf24Q9Y442 160 aa12.01□□□□□ -0.49
SMPD3-211ENST00000568373 STAB2Q8WWQ8 2551 aa12.01□□□□□ -0.49
SMPD3-211ENST00000568373 MEGF8Q7Z7M0 2845 aa12.01□□□□□ -0.49
SMPD3-211ENST00000568373 COL7A1Q02388 2944 aa12.01□□□□□ -0.49
SMPD3-211ENST00000568373 XAGE1AQ9HD64 81 aa12.01□□□□□ -0.49
SMPD3-211ENST00000568373 F8WDY8 70 aa11.99□□□□□ -0.49
SMPD3-211ENST00000568373 DNAH1Q9P2D7 4330 aa11.99□□□□□ -0.49
SMPD3-211ENST00000568373 RPL18AQ02543 176 aaKnown RBP11.98□□□□□ -0.49
SMPD3-211ENST00000568373 UPK3BQ9BT76 320 aa11.98□□□□□ -0.49
SMPD3-211ENST00000568373 IGLV6-57P01721 117 aa11.98□□□□□ -0.49
SMPD3-211ENST00000568373 XGP55808 180 aa11.98□□□□□ -0.49
SMPD3-211ENST00000568373 NDUFC2-KCTD14E9PQ53 114 aa11.97□□□□□ -0.49
SMPD3-211ENST00000568373 C6orf99Q4VX62 202 aa11.97□□□□□ -0.49
SMPD3-211ENST00000568373 A0A1B0GX51 115 aa11.96□□□□□ -0.49
SMPD3-211ENST00000568373 FAM240AA0A1B0GVK7 77 aa11.95□□□□□ -0.5
SMPD3-211ENST00000568373 SYCNQ0VAF6 134 aa11.95□□□□□ -0.5
SMPD3-211ENST00000568373 B9D2Q9BPU9 175 aa11.95□□□□□ -0.5
SMPD3-211ENST00000568373 PRKDCP78527 4128 aaKnown RBP11.94□□□□□ -0.5
SMPD3-211ENST00000568373 MT-ATP8P03928 68 aa11.94□□□□□ -0.5
SMPD3-211ENST00000568373 LINC00167Q96N53 147 aa11.94□□□□□ -0.5
SMPD3-211ENST00000568373 Q8N814 137 aa11.93□□□□□ -0.5
SMPD3-211ENST00000568373 SLPIP03973 132 aa11.93□□□□□ -0.5
SMPD3-211ENST00000568373 RMI2Q96E14 147 aa11.93□□□□□ -0.5
SMPD3-211ENST00000568373 ORMDL1Q9P0S3 153 aa11.93□□□□□ -0.5
SMPD3-211ENST00000568373 VPREB1P12018 145 aa11.92□□□□□ -0.5
SMPD3-211ENST00000568373 TRBV10-3A0A0K0K1G6 114 aa11.91□□□□□ -0.5
SMPD3-211ENST00000568373 INAFM2P0DMQ5 153 aa11.91□□□□□ -0.5
SMPD3-211ENST00000568373 GAGE2EQ4V326 116 aa11.91□□□□□ -0.5
SMPD3-211ENST00000568373 Q6ZRP5 223 aa11.91□□□□□ -0.5
SMPD3-211ENST00000568373 GAGE2DQ9UEU5 116 aa11.91□□□□□ -0.5
SMPD3-211ENST00000568373 USP17L23D6RBM5 183 aa11.9□□□□□ -0.51
SMPD3-211ENST00000568373 CASC10Q5T4H9 136 aa11.9□□□□□ -0.51
SMPD3-211ENST00000568373 LINC00575Q6W349 94 aa11.89□□□□□ -0.51
SMPD3-211ENST00000568373 TRAV23DV6A0A075B6W5 121 aa11.88□□□□□ -0.51
SMPD3-211ENST00000568373 SNCGO76070 127 aa11.88□□□□□ -0.51
SMPD3-211ENST00000568373 C9orf129Q5T035 196 aaKnown RBP11.88□□□□□ -0.51
SMPD3-211ENST00000568373 OBSCN-AS1Q96MR7 158 aa11.88□□□□□ -0.51
SMPD3-211ENST00000568373 DYNC2H1Q8NCM8 4307 aaKnown RBP11.87□□□□□ -0.51
SMPD3-211ENST00000568373 ACYP1P07311 99 aa11.87□□□□□ -0.51
SMPD3-211ENST00000568373 M0R378 163 aa11.87□□□□□ -0.51
SMPD3-211ENST00000568373 DIRC1Q969H9 104 aa11.85□□□□□ -0.51
SMPD3-211ENST00000568373 LYSTQ99698 3801 aa11.85□□□□□ -0.51
SMPD3-211ENST00000568373 TLX1NBP0CAT3 122 aa11.85□□□□□ -0.51
SMPD3-211ENST00000568373 APLNQ9ULZ1 77 aa11.85□□□□□ -0.51
SMPD3-211ENST00000568373 hADV29S1A0JD25 119 aa11.84□□□□□ -0.51
SMPD3-211ENST00000568373 TMEM256-PLSCR3K7ERE1 68 aa11.84□□□□□ -0.51
SMPD3-211ENST00000568373 ZNF73O43830 326 aaPredicted RBP11.84□□□□□ -0.51
SMPD3-211ENST00000568373 SVIPQ8NHG7 77 aa11.83□□□□□ -0.52
SMPD3-211ENST00000568373 C14orf132Q9NPU4 83 aa11.82□□□□□ -0.52
SMPD3-211ENST00000568373 UBE2DNLQ8IWF7 75 aa11.81□□□□□ -0.52
SMPD3-211ENST00000568373 KRTAP1-5Q9BYS1 174 aa11.81□□□□□ -0.52
SMPD3-211ENST00000568373 GAGE2AQ6NT46 116 aa11.8□□□□□ -0.52
SMPD3-211ENST00000568373 TRBV7-6A0A0J9YX20 115 aa11.8□□□□□ -0.52
SMPD3-211ENST00000568373 FBN3Q75N90 2809 aa11.8□□□□□ -0.52
SMPD3-211ENST00000568373 NHLRC4P0CG21 123 aaPredicted RBP11.79□□□□□ -0.52
SMPD3-211ENST00000568373 TTC32Q5I0X7 151 aa11.79□□□□□ -0.52
SMPD3-211ENST00000568373 COX7BP24311 80 aa11.79□□□□□ -0.52
SMPD3-211ENST00000568373 ELOF1P60002 83 aaKnown RBP11.79□□□□□ -0.52
SMPD3-211ENST00000568373 CSMD3Q7Z407 3707 aa11.78□□□□□ -0.52
SMPD3-211ENST00000568373 JMJD7-PLA2G4BH0Y9G9 81 aa11.78□□□□□ -0.52
SMPD3-211ENST00000568373 SERTAD4-AS1Q5TG53 156 aa11.78□□□□□ -0.52
SMPD3-211ENST00000568373 NKAPP1Q8N9T2 125 aa11.77□□□□□ -0.52
SMPD3-211ENST00000568373 PLA2G2DQ9UNK4 145 aa11.77□□□□□ -0.52
SMPD3-211ENST00000568373 DNAH10Q8IVF4 4471 aa11.76□□□□□ -0.53
SMPD3-211ENST00000568373 SDIM1Q6ZPB5 146 aa11.76□□□□□ -0.53
SMPD3-211ENST00000568373 Q6ZQY7 126 aa11.75□□□□□ -0.53
SMPD3-211ENST00000568373 SMCR5Q8TEV8 140 aa11.75□□□□□ -0.53
SMPD3-211ENST00000568373 GAGE2BQ13066 116 aa11.74□□□□□ -0.53
SMPD3-211ENST00000568373 TGP01266 2768 aa11.74□□□□□ -0.53
SMPD3-211ENST00000568373 PLECQ15149 4684 aaKnown RBP11.74□□□□□ -0.53
SMPD3-211ENST00000568373 NUPR2A6NF83 97 aa11.74□□□□□ -0.53
SMPD3-211ENST00000568373 C7orf33Q8WU49 177 aa11.74□□□□□ -0.53
SMPD3-211ENST00000568373 TENM2Q9NT68 2774 aa11.74□□□□□ -0.53
SMPD3-211ENST00000568373 Q6Q795 121 aa11.73□□□□□ -0.53
SMPD3-211ENST00000568373 H3BQ85 93 aa11.72□□□□□ -0.53
SMPD3-211ENST00000568373 KCNQ1DNQ9H478 68 aa11.72□□□□□ -0.53
SMPD3-211ENST00000568373 IGLV5-37A0A075B6J1 123 aa11.72□□□□□ -0.53
SMPD3-211ENST00000568373 LOC107984640A0A0U1RRK4 108 aa11.72□□□□□ -0.53
SMPD3-211ENST00000568373 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.72□□□□□ -0.53
SMPD3-211ENST00000568373 LINC00643Q86TS7 51 aa11.72□□□□□ -0.53
SMPD3-211ENST00000568373 LINC00528Q8N1L1 170 aa11.72□□□□□ -0.53
SMPD3-211ENST00000568373 PSCAO43653 123 aa11.71□□□□□ -0.53
SMPD3-211ENST00000568373 FAM168BA1KXE4 195 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms