RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 C2orf48Q96LS8 159 aa9.75□□□□□ -0.85
COMMD4-221ENST00000567935 SND1-IT1Q9HBX3 110 aa9.75□□□□□ -0.85
COMMD4-221ENST00000567935 ZNF561-AS1K7EIQ3 104 aa9.74□□□□□ -0.85
COMMD4-221ENST00000567935 COX6CP09669 75 aa9.74□□□□□ -0.85
COMMD4-221ENST00000567935 IGKV2D-24A0A075B6R9 120 aa9.73□□□□□ -0.85
COMMD4-221ENST00000567935 A0A1B0GVY2 172 aa9.73□□□□□ -0.85
COMMD4-221ENST00000567935 SCGB1C2P0DMR2 95 aa9.73□□□□□ -0.85
COMMD4-221ENST00000567935 RPL13AP40429 203 aaKnown RBP9.73□□□□□ -0.85
COMMD4-221ENST00000567935 APLNQ9ULZ1 77 aa9.73□□□□□ -0.85
COMMD4-221ENST00000567935 NDUFC2O95298 119 aa9.72□□□□□ -0.85
COMMD4-221ENST00000567935 F8W1H4 67 aa9.7□□□□□ -0.86
COMMD4-221ENST00000567935 H7C2G1 150 aa9.7□□□□□ -0.86
COMMD4-221ENST00000567935 UNQ6190/PRO20217Q6UXQ8 127 aa9.7□□□□□ -0.86
COMMD4-221ENST00000567935 UBE2DNLQ8IWF7 75 aa9.7□□□□□ -0.86
COMMD4-221ENST00000567935 PKD1P98161 4303 aa9.7□□□□□ -0.86
COMMD4-221ENST00000567935 C15orf56Q8N910 161 aa9.69□□□□□ -0.86
COMMD4-221ENST00000567935 CAMK2N2Q96S95 79 aa9.69□□□□□ -0.86
COMMD4-221ENST00000567935 TRIAP1O43715 76 aa9.68□□□□□ -0.86
COMMD4-221ENST00000567935 C6orf223Q8N319 242 aa9.68□□□□□ -0.86
COMMD4-221ENST00000567935 Q9HAA7 133 aa9.68□□□□□ -0.86
COMMD4-221ENST00000567935 H3BMG7 143 aa9.67□□□□□ -0.86
COMMD4-221ENST00000567935 ATXN8Q156A1 80 aa9.67□□□□□ -0.86
COMMD4-221ENST00000567935 TCL1BO95988 128 aa9.66□□□□□ -0.86
COMMD4-221ENST00000567935 RNF151Q2KHN1 245 aa9.66□□□□□ -0.86
COMMD4-221ENST00000567935 HIGD2BQ4VC39 106 aa9.66□□□□□ -0.86
COMMD4-221ENST00000567935 C10orf25Q5T742 122 aa9.66□□□□□ -0.86
COMMD4-221ENST00000567935 C6orf48Q9UBA6 75 aa9.66□□□□□ -0.86
COMMD4-221ENST00000567935 IGKV2-28A0A075B6P5 120 aa9.65□□□□□ -0.86
COMMD4-221ENST00000567935 IGKV2D-28P01615 120 aa9.65□□□□□ -0.86
COMMD4-221ENST00000567935 TTC32Q5I0X7 151 aa9.65□□□□□ -0.86
COMMD4-221ENST00000567935 RPL28P46779 137 aaKnown RBP9.64□□□□□ -0.87
COMMD4-221ENST00000567935 C9orf116Q5BN46 136 aaPredicted RBP9.64□□□□□ -0.87
COMMD4-221ENST00000567935 LINC00337Q8N6G1 96 aa9.64□□□□□ -0.87
COMMD4-221ENST00000567935 M0QXV9 152 aa9.63□□□□□ -0.87
COMMD4-221ENST00000567935 SYCNQ0VAF6 134 aa9.63□□□□□ -0.87
COMMD4-221ENST00000567935 LINC00336Q6ZUF6 198 aa9.63□□□□□ -0.87
COMMD4-221ENST00000567935 LINC00526Q96FQ7 95 aa9.63□□□□□ -0.87
COMMD4-221ENST00000567935 TRBV10-2A0A0K0K1G8 114 aa9.62□□□□□ -0.87
COMMD4-221ENST00000567935 NDUFC2-KCTD14E9PQ53 114 aa9.62□□□□□ -0.87
COMMD4-221ENST00000567935 Q6ZRU5 148 aa9.62□□□□□ -0.87
COMMD4-221ENST00000567935 USP17L23D6RBM5 183 aa9.61□□□□□ -0.87
COMMD4-221ENST00000567935 TMEM126AQ9H061 195 aa9.61□□□□□ -0.87
COMMD4-221ENST00000567935 PRO0461Q9UI25 63 aa9.61□□□□□ -0.87
COMMD4-221ENST00000567935 H0YGX0 51 aa9.6□□□□□ -0.87
COMMD4-221ENST00000567935 LST1O00453 97 aa9.6□□□□□ -0.87
COMMD4-221ENST00000567935 TLX1NBP0CAT3 122 aa9.59□□□□□ -0.87
COMMD4-221ENST00000567935 LINC01620Q4KN68 170 aa9.59□□□□□ -0.87
COMMD4-221ENST00000567935 OR13C6PQ8NH95 151 aa9.59□□□□□ -0.87
COMMD4-221ENST00000567935 CARD19Q96LW7 228 aa9.59□□□□□ -0.87
COMMD4-221ENST00000567935 LINC01600Q96MT4 127 aa9.59□□□□□ -0.87
COMMD4-221ENST00000567935 LRP1BQ9NZR2 4599 aa9.59□□□□□ -0.87
COMMD4-221ENST00000567935 C14orf177Q52M58 125 aa9.58□□□□□ -0.88
COMMD4-221ENST00000567935 SMIM11BQ8TCY0 68 aa9.58□□□□□ -0.88
COMMD4-221ENST00000567935 TRACP01848 142 aa9.57□□□□□ -0.88
COMMD4-221ENST00000567935 WFDC2Q14508 124 aa9.57□□□□□ -0.88
COMMD4-221ENST00000567935 CBY1Q9Y3M2 126 aa9.57□□□□□ -0.88
COMMD4-221ENST00000567935 C9JAW5 83 aa9.56□□□□□ -0.88
COMMD4-221ENST00000567935 H3BT86 120 aa9.56□□□□□ -0.88
COMMD4-221ENST00000567935 K7ERU9 68 aa9.56□□□□□ -0.88
COMMD4-221ENST00000567935 SLC25A20O43772 301 aa9.56□□□□□ -0.88
COMMD4-221ENST00000567935 APOBP04114 4563 aaKnown RBP9.55□□□□□ -0.88
COMMD4-221ENST00000567935 NBDYA0A0U1RRE5 68 aa9.55□□□□□ -0.88
COMMD4-221ENST00000567935 OCIAD2Q56VL3 154 aa9.55□□□□□ -0.88
COMMD4-221ENST00000567935 S100A7L2Q5SY68 101 aa9.55□□□□□ -0.88
COMMD4-221ENST00000567935 CLEC2BQ92478 149 aa9.55□□□□□ -0.88
COMMD4-221ENST00000567935 PSCAO43653 123 aa9.54□□□□□ -0.88
COMMD4-221ENST00000567935 KRTAP1-5Q9BYS1 174 aa9.54□□□□□ -0.88
COMMD4-221ENST00000567935 A0A1B0GX51 115 aa9.53□□□□□ -0.88
COMMD4-221ENST00000567935 J3QR89 54 aa9.53□□□□□ -0.88
COMMD4-221ENST00000567935 SMCPP49901 116 aaPredicted RBP9.53□□□□□ -0.88
COMMD4-221ENST00000567935 ANKRD29Q8N6D5 301 aa9.53□□□□□ -0.88
COMMD4-221ENST00000567935 NCR3O14931 201 aa9.52□□□□□ -0.89
COMMD4-221ENST00000567935 RTL8CO15255 209 aa9.52□□□□□ -0.89
COMMD4-221ENST00000567935 IGLV6-57P01721 117 aa9.52□□□□□ -0.89
COMMD4-221ENST00000567935 TEN1Q86WV5 123 aa9.52□□□□□ -0.89
COMMD4-221ENST00000567935 XAGE1AQ9HD64 81 aa9.52□□□□□ -0.89
COMMD4-221ENST00000567935 PLA2G2DQ9UNK4 145 aa9.52□□□□□ -0.89
COMMD4-221ENST00000567935 PKIGQ9Y2B9 76 aa9.52□□□□□ -0.89
COMMD4-221ENST00000567935 M0R378 163 aa9.51□□□□□ -0.89
COMMD4-221ENST00000567935 VPREB1P12018 145 aa9.51□□□□□ -0.89
COMMD4-221ENST00000567935 CNBPP62633 177 aaKnown RBP9.51□□□□□ -0.89
COMMD4-221ENST00000567935 ETDBQ3ZM63 59 aa9.51□□□□□ -0.89
COMMD4-221ENST00000567935 MTURNQ8N3F0 131 aa9.51□□□□□ -0.89
COMMD4-221ENST00000567935 SNCGO76070 127 aa9.5□□□□□ -0.89
COMMD4-221ENST00000567935 PRR3P79522 188 aaKnown RBP9.5□□□□□ -0.89
COMMD4-221ENST00000567935 Q6ZRP5 223 aa9.5□□□□□ -0.89
COMMD4-221ENST00000567935 Q8NDZ9 215 aa9.5□□□□□ -0.89
COMMD4-221ENST00000567935 DMBT1Q9UGM3 2413 aaPredicted RBP9.5□□□□□ -0.89
COMMD4-221ENST00000567935 LOC107984640A0A0U1RRK4 108 aa9.49□□□□□ -0.89
COMMD4-221ENST00000567935 SLPIP03973 132 aa9.49□□□□□ -0.89
COMMD4-221ENST00000567935 RPL18AQ02543 176 aaKnown RBP9.49□□□□□ -0.89
COMMD4-221ENST00000567935 GAGE2EQ4V326 116 aa9.49□□□□□ -0.89
COMMD4-221ENST00000567935 GAGE2DQ9UEU5 116 aa9.49□□□□□ -0.89
COMMD4-221ENST00000567935 DNAL4O96015 105 aa9.48□□□□□ -0.89
COMMD4-221ENST00000567935 Q8N1X5 172 aa9.48□□□□□ -0.89
COMMD4-221ENST00000567935 PPDPFLQ8WWR9 84 aa9.48□□□□□ -0.89
COMMD4-221ENST00000567935 CDK2AP2O75956 126 aa9.47□□□□□ -0.89
COMMD4-221ENST00000567935 IGLV5-37A0A075B6J1 123 aa9.46□□□□□ -0.9
COMMD4-221ENST00000567935 TRBV7-6A0A0J9YX20 115 aa9.46□□□□□ -0.9
COMMD4-221ENST00000567935 FAM218AQ96MZ4 157 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 406.4 ms