RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 SNAPINO95295 136 aa10.68□□□□□ -0.7
USB1-213ENST00000566292 SFTA2Q6UW10 78 aa10.68□□□□□ -0.7
USB1-213ENST00000566292 YPEL4Q96NS1 127 aa10.68□□□□□ -0.7
USB1-213ENST00000566292 SVBPQ8N300 66 aa10.67□□□□□ -0.7
USB1-213ENST00000566292 TMEM223A0PJW6 202 aa10.66□□□□□ -0.7
USB1-213ENST00000566292 TRAV12-1A0A0B4J245 112 aa10.65□□□□□ -0.7
USB1-213ENST00000566292 LINC00158P58513 81 aa10.65□□□□□ -0.7
USB1-213ENST00000566292 LINC00304Q8N9R0 145 aa10.65□□□□□ -0.7
USB1-213ENST00000566292 A0A0U1RRA0 63 aa10.64□□□□□ -0.71
USB1-213ENST00000566292 NDUFA5Q16718 116 aa10.64□□□□□ -0.71
USB1-213ENST00000566292 IFI27L1Q96BM0 104 aa10.64□□□□□ -0.71
USB1-213ENST00000566292 CHCHD1Q96BP2 118 aaKnown RBP10.64□□□□□ -0.71
USB1-213ENST00000566292 PLEKHB2Q96CS7 222 aa10.64□□□□□ -0.71
USB1-213ENST00000566292 IGKV2D-26A0A0A0MRZ7 120 aa10.63□□□□□ -0.71
USB1-213ENST00000566292 RETNLBQ9BQ08 111 aa10.62□□□□□ -0.71
USB1-213ENST00000566292 CBLN2Q8IUK8 224 aa10.61□□□□□ -0.71
USB1-213ENST00000566292 SMIM13P0DJ93 91 aa10.6□□□□□ -0.71
USB1-213ENST00000566292 C3orf22Q8N5N4 141 aa10.6□□□□□ -0.71
USB1-213ENST00000566292 HIGD2AQ9BW72 106 aa10.59□□□□□ -0.71
USB1-213ENST00000566292 FAM19A2Q8N3H0 131 aa10.58□□□□□ -0.72
USB1-213ENST00000566292 MEIG1Q5JSS6 88 aa10.56□□□□□ -0.72
USB1-213ENST00000566292 BOD1L2Q8IYS8 172 aa10.56□□□□□ -0.72
USB1-213ENST00000566292 MIR7-3HGQ8N6C7 128 aa10.56□□□□□ -0.72
USB1-213ENST00000566292 SPRR4Q96PI1 79 aa10.56□□□□□ -0.72
USB1-213ENST00000566292 ATP6V1G1O75348 118 aa10.55□□□□□ -0.72
USB1-213ENST00000566292 HSBP1O75506 76 aa10.55□□□□□ -0.72
USB1-213ENST00000566292 PRYO14603 147 aa10.54□□□□□ -0.72
USB1-213ENST00000566292 NCR3O14931 201 aa10.54□□□□□ -0.72
USB1-213ENST00000566292 HERV-K104P63124 156 aa10.54□□□□□ -0.72
USB1-213ENST00000566292 NDUFA12Q9UI09 145 aa10.54□□□□□ -0.72
USB1-213ENST00000566292 CTAG1AP78358 180 aa10.53□□□□□ -0.72
USB1-213ENST00000566292 H0Y8G0 127 aa10.52□□□□□ -0.73
USB1-213ENST00000566292 SPRR1AP35321 89 aa10.52□□□□□ -0.73
USB1-213ENST00000566292 LINC00310P59036 64 aa10.52□□□□□ -0.73
USB1-213ENST00000566292 KCNQ1DNQ9H478 68 aa10.52□□□□□ -0.73
USB1-213ENST00000566292 MUC17Q685J3 4493 aa10.51□□□□□ -0.73
USB1-213ENST00000566292 KRTAP4-16G5E9R7 235 aaPredicted RBP10.51□□□□□ -0.73
USB1-213ENST00000566292 TSPEAR-AS2P59090 65 aa10.51□□□□□ -0.73
USB1-213ENST00000566292 TPRXLQ17RH7 258 aa10.51□□□□□ -0.73
USB1-213ENST00000566292 LINC00337Q8N6G1 96 aa10.51□□□□□ -0.73
USB1-213ENST00000566292 IGLV7-46A0A075B6I9 117 aa10.5□□□□□ -0.73
USB1-213ENST00000566292 MYMXA0A1B0GTQ4 84 aa10.5□□□□□ -0.73
USB1-213ENST00000566292 TRGC2P03986 189 aa10.5□□□□□ -0.73
USB1-213ENST00000566292 TRBV10-3A0A0K0K1G6 114 aa10.49□□□□□ -0.73
USB1-213ENST00000566292 LINC00587B1AMM8 73 aa10.49□□□□□ -0.73
USB1-213ENST00000566292 ZNF706Q9Y5V0 76 aaPredicted RBP10.49□□□□□ -0.73
USB1-213ENST00000566292 SERF1AO75920 110 aa10.48□□□□□ -0.73
USB1-213ENST00000566292 LEPROTL1O95214 131 aa10.48□□□□□ -0.73
USB1-213ENST00000566292 SMCR5Q8TEV8 140 aa10.48□□□□□ -0.73
USB1-213ENST00000566292 A0A0U1RQV1 116 aa10.47□□□□□ -0.73
USB1-213ENST00000566292 LEPROTO15243 131 aa10.47□□□□□ -0.73
USB1-213ENST00000566292 DAND5Q8N907 189 aa10.47□□□□□ -0.73
USB1-213ENST00000566292 MAP1LC3CQ9BXW4 147 aa10.47□□□□□ -0.73
USB1-213ENST00000566292 CDIP1Q9H305 208 aa10.47□□□□□ -0.73
USB1-213ENST00000566292 LOC107984156A0A0G2JMH3 177 aa10.46□□□□□ -0.73
USB1-213ENST00000566292 ETDCA0A1B0GVM5 59 aa10.46□□□□□ -0.73
USB1-213ENST00000566292 SPAG11AQ6PDA7 123 aa10.46□□□□□ -0.73
USB1-213ENST00000566292 ARL17AQ8IVW1 177 aa10.46□□□□□ -0.73
USB1-213ENST00000566292 PPDPFQ9H3Y8 114 aa10.46□□□□□ -0.73
USB1-213ENST00000566292 Q8NBF4 154 aa10.44□□□□□ -0.74
USB1-213ENST00000566292 J3QQQ9 107 aa10.43□□□□□ -0.74
USB1-213ENST00000566292 PLNP26678 52 aa10.43□□□□□ -0.74
USB1-213ENST00000566292 PMCHL2Q9BQD1 86 aa10.43□□□□□ -0.74
USB1-213ENST00000566292 B5MCH6 92 aa10.42□□□□□ -0.74
USB1-213ENST00000566292 FABP4P15090 132 aa10.42□□□□□ -0.74
USB1-213ENST00000566292 LINC00483Q53H64 154 aa10.42□□□□□ -0.74
USB1-213ENST00000566292 TRBV10-2A0A0K0K1G8 114 aa10.41□□□□□ -0.74
USB1-213ENST00000566292 ERC2-IT1O76042 136 aa10.41□□□□□ -0.74
USB1-213ENST00000566292 DPM2O94777 84 aa10.41□□□□□ -0.74
USB1-213ENST00000566292 DDTP30046 118 aa10.41□□□□□ -0.74
USB1-213ENST00000566292 C4orf48Q5BLP8 95 aa10.41□□□□□ -0.74
USB1-213ENST00000566292 HSPB8Q9UJY1 196 aa10.41□□□□□ -0.74
USB1-213ENST00000566292 FAT4Q6V0I7 4981 aa10.4□□□□□ -0.74
USB1-213ENST00000566292 IGKCP01834 107 aa10.39□□□□□ -0.75
USB1-213ENST00000566292 HERVK_113P61574 105 aa10.39□□□□□ -0.75
USB1-213ENST00000566292 S100A12P80511 92 aa10.39□□□□□ -0.75
USB1-213ENST00000566292 GAGE2AQ6NT46 116 aa10.39□□□□□ -0.75
USB1-213ENST00000566292 NMUP48645 174 aa10.38□□□□□ -0.75
USB1-213ENST00000566292 LCE2AQ5TA79 106 aaPredicted RBP10.38□□□□□ -0.75
USB1-213ENST00000566292 FP248Q71RG6 208 aaPredicted RBP10.38□□□□□ -0.75
USB1-213ENST00000566292 Q9BRP9 147 aa10.38□□□□□ -0.75
USB1-213ENST00000566292 SPANXB1Q9NS25 103 aaPredicted RBP10.38□□□□□ -0.75
USB1-213ENST00000566292 COLCA2A8K830 154 aa10.37□□□□□ -0.75
USB1-213ENST00000566292 LGALS3P17931 250 aaKnown RBP10.37□□□□□ -0.75
USB1-213ENST00000566292 SOSTDC1Q6X4U4 206 aa10.36□□□□□ -0.75
USB1-213ENST00000566292 Q6ZRX8 168 aa10.36□□□□□ -0.75
USB1-213ENST00000566292 MIEN1Q9BRT3 115 aa10.36□□□□□ -0.75
USB1-213ENST00000566292 EIF4EBP3O60516 100 aaPredicted RBP10.35□□□□□ -0.75
USB1-213ENST00000566292 NDUFC2O95298 119 aa10.35□□□□□ -0.75
USB1-213ENST00000566292 SPINK1P00995 79 aa10.35□□□□□ -0.75
USB1-213ENST00000566292 IGLV6-57P01721 117 aa10.35□□□□□ -0.75
USB1-213ENST00000566292 SLC7A5P1Q8MH63 180 aa10.35□□□□□ -0.75
USB1-213ENST00000566292 MOBPQ13875 183 aa10.34□□□□□ -0.75
USB1-213ENST00000566292 KRTAP13-3Q3SY46 172 aa10.34□□□□□ -0.75
USB1-213ENST00000566292 ADAMTSL4-AS1Q5T5F5 129 aa10.34□□□□□ -0.75
USB1-213ENST00000566292 IGLV9-49A0A0B4J1Y8 123 aa10.33□□□□□ -0.76
USB1-213ENST00000566292 A0A0J9YXY3 114 aa10.33□□□□□ -0.76
USB1-213ENST00000566292 NPC2P61916 151 aa10.33□□□□□ -0.76
USB1-213ENST00000566292 S100A7L2Q5SY68 101 aa10.33□□□□□ -0.76
USB1-213ENST00000566292 TRAV23DV6A0A075B6W5 121 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms