RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 GAGE10A6NGK3 116 aa6.42□□□□□ -1.38
SF3B3-207ENST00000566095 K7EP34 96 aa6.42□□□□□ -1.38
SF3B3-207ENST00000566095 VAMP3Q15836 100 aa6.42□□□□□ -1.38
SF3B3-207ENST00000566095 SOSTDC1Q6X4U4 206 aa6.42□□□□□ -1.38
SF3B3-207ENST00000566095 LINC00526Q96FQ7 95 aa6.42□□□□□ -1.38
SF3B3-207ENST00000566095 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-207ENST00000566095 IGLV5-52A0A0A0MRZ9 124 aa6.41□□□□□ -1.38
SF3B3-207ENST00000566095 TSPAN13O95857 204 aa6.41□□□□□ -1.38
SF3B3-207ENST00000566095 RPL18AQ02543 176 aaKnown RBP6.41□□□□□ -1.38
SF3B3-207ENST00000566095 LINC01600Q96MT4 127 aa6.41□□□□□ -1.38
SF3B3-207ENST00000566095 TMEM126AQ9H061 195 aa6.41□□□□□ -1.38
SF3B3-207ENST00000566095 PLA2G2DQ9UNK4 145 aa6.41□□□□□ -1.38
SF3B3-207ENST00000566095 DNAH6Q9C0G6 4158 aa6.4□□□□□ -1.38
SF3B3-207ENST00000566095 A0A0U1RRA0 63 aa6.4□□□□□ -1.38
SF3B3-207ENST00000566095 M0QXV9 152 aa6.4□□□□□ -1.38
SF3B3-207ENST00000566095 RPL28P46779 137 aaKnown RBP6.4□□□□□ -1.38
SF3B3-207ENST00000566095 C10orf25Q5T742 122 aa6.4□□□□□ -1.38
SF3B3-207ENST00000566095 SPCS1Q9Y6A9 102 aa6.4□□□□□ -1.38
SF3B3-207ENST00000566095 DNAH1Q9P2D7 4330 aa6.39□□□□□ -1.39
SF3B3-207ENST00000566095 F8W1H4 67 aa6.39□□□□□ -1.39
SF3B3-207ENST00000566095 H0YGX0 51 aa6.39□□□□□ -1.39
SF3B3-207ENST00000566095 K7ERJ3 54 aa6.39□□□□□ -1.39
SF3B3-207ENST00000566095 RTL8CO15255 209 aa6.39□□□□□ -1.39
SF3B3-207ENST00000566095 WFDC2Q14508 124 aa6.39□□□□□ -1.39
SF3B3-207ENST00000566095 C9orf163Q8N9P6 203 aa6.39□□□□□ -1.39
SF3B3-207ENST00000566095 A0A1B0GX51 115 aa6.38□□□□□ -1.39
SF3B3-207ENST00000566095 C16orf90A8MZG2 172 aa6.38□□□□□ -1.39
SF3B3-207ENST00000566095 TNP2Q05952 138 aa6.38□□□□□ -1.39
SF3B3-207ENST00000566095 C9orf116Q5BN46 136 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-207ENST00000566095 DAND5Q8N907 189 aa6.38□□□□□ -1.39
SF3B3-207ENST00000566095 RYR3Q15413 4870 aa6.37□□□□□ -1.39
SF3B3-207ENST00000566095 IGKV2-28A0A075B6P5 120 aa6.37□□□□□ -1.39
SF3B3-207ENST00000566095 EIF4EBP3O60516 100 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-207ENST00000566095 IGKV2D-28P01615 120 aa6.37□□□□□ -1.39
SF3B3-207ENST00000566095 GAGE2EQ4V326 116 aa6.37□□□□□ -1.39
SF3B3-207ENST00000566095 LYSTQ99698 3801 aa6.37□□□□□ -1.39
SF3B3-207ENST00000566095 GAGE2DQ9UEU5 116 aa6.37□□□□□ -1.39
SF3B3-207ENST00000566095 TRBV7-6A0A0J9YX20 115 aa6.36□□□□□ -1.39
SF3B3-207ENST00000566095 RPL13AP40429 203 aaKnown RBP6.36□□□□□ -1.39
SF3B3-207ENST00000566095 GAGE2BQ13066 116 aa6.36□□□□□ -1.39
SF3B3-207ENST00000566095 NKAPP1Q8N9T2 125 aa6.36□□□□□ -1.39
SF3B3-207ENST00000566095 KMT2CQ8NEZ4 4911 aaKnown RBP6.35□□□□□ -1.39
SF3B3-207ENST00000566095 IGLV5-37A0A075B6J1 123 aa6.35□□□□□ -1.39
SF3B3-207ENST00000566095 SLPIP03973 132 aa6.35□□□□□ -1.39
SF3B3-207ENST00000566095 PSMB2P49721 201 aa6.35□□□□□ -1.39
SF3B3-207ENST00000566095 NPC2P61916 151 aa6.35□□□□□ -1.39
SF3B3-207ENST00000566095 ATXN8Q156A1 80 aa6.35□□□□□ -1.39
SF3B3-207ENST00000566095 Q1RN00 199 aa6.35□□□□□ -1.39
SF3B3-207ENST00000566095 Q6ZRP5 223 aa6.35□□□□□ -1.39
SF3B3-207ENST00000566095 LINC00337Q8N6G1 96 aa6.35□□□□□ -1.39
SF3B3-207ENST00000566095 H3BQ85 93 aa6.34□□□□□ -1.39
SF3B3-207ENST00000566095 SNCGO76070 127 aa6.34□□□□□ -1.39
SF3B3-207ENST00000566095 IGLV6-57P01721 117 aa6.34□□□□□ -1.39
SF3B3-207ENST00000566095 TRACP01848 142 aa6.34□□□□□ -1.39
SF3B3-207ENST00000566095 SCGB1C2P0DMR2 95 aa6.34□□□□□ -1.39
SF3B3-207ENST00000566095 DPH3Q96FX2 82 aa6.34□□□□□ -1.39
SF3B3-207ENST00000566095 TRIAP1O43715 76 aa6.33□□□□□ -1.4
SF3B3-207ENST00000566095 S100A7L2Q5SY68 101 aa6.33□□□□□ -1.4
SF3B3-207ENST00000566095 XAGE1AQ9HD64 81 aa6.33□□□□□ -1.4
SF3B3-207ENST00000566095 M0R378 163 aa6.32□□□□□ -1.4
SF3B3-207ENST00000566095 LST1O00453 97 aa6.32□□□□□ -1.4
SF3B3-207ENST00000566095 GHRHP01286 108 aa6.32□□□□□ -1.4
SF3B3-207ENST00000566095 SDIM1Q6ZPB5 146 aa6.32□□□□□ -1.4
SF3B3-207ENST00000566095 BIRC6Q9NR09 4857 aa6.31□□□□□ -1.4
SF3B3-207ENST00000566095 A0A096LNI7 61 aa6.31□□□□□ -1.4
SF3B3-207ENST00000566095 IGKV2-24A0A0C4DH68 120 aa6.31□□□□□ -1.4
SF3B3-207ENST00000566095 H3BT86 120 aa6.31□□□□□ -1.4
SF3B3-207ENST00000566095 VPREB1P12018 145 aa6.31□□□□□ -1.4
SF3B3-207ENST00000566095 OR13C6PQ8NH95 151 aa6.31□□□□□ -1.4
SF3B3-207ENST00000566095 TCL1BO95988 128 aa6.3□□□□□ -1.4
SF3B3-207ENST00000566095 SMIM11BQ8TCY0 68 aa6.3□□□□□ -1.4
SF3B3-207ENST00000566095 KMT2AQ03164 3969 aa6.3□□□□□ -1.4
SF3B3-207ENST00000566095 H3BMG7 143 aa6.29□□□□□ -1.4
SF3B3-207ENST00000566095 LINC01620Q4KN68 170 aa6.29□□□□□ -1.4
SF3B3-207ENST00000566095 C9orf129Q5T035 196 aaKnown RBP6.29□□□□□ -1.4
SF3B3-207ENST00000566095 PRO0461Q9UI25 63 aa6.29□□□□□ -1.4
SF3B3-207ENST00000566095 SACSQ9NZJ4 4579 aa6.29□□□□□ -1.4
SF3B3-207ENST00000566095 NCR3O14931 201 aa6.28□□□□□ -1.4
SF3B3-207ENST00000566095 FAM19A5Q7Z5A7 132 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-207ENST00000566095 SPACA4Q8TDM5 124 aa6.28□□□□□ -1.4
SF3B3-207ENST00000566095 NAA38Q9BRA0 125 aaKnown RBP6.28□□□□□ -1.4
SF3B3-207ENST00000566095 KCNQ1DNQ9H478 68 aa6.28□□□□□ -1.4
SF3B3-207ENST00000566095 EPM2AB3EWF7 344 aa6.27□□□□□ -1.41
SF3B3-207ENST00000566095 H7C2G1 150 aa6.27□□□□□ -1.41
SF3B3-207ENST00000566095 INAFM2P0DMQ5 153 aa6.27□□□□□ -1.41
SF3B3-207ENST00000566095 MRPL55Q7Z7F7 128 aaKnown RBP6.27□□□□□ -1.41
SF3B3-207ENST00000566095 J3QR89 54 aa6.26□□□□□ -1.41
SF3B3-207ENST00000566095 KRTAP10-2P60368 255 aa6.26□□□□□ -1.41
SF3B3-207ENST00000566095 C21orf62-AS1Q17RA5 79 aa6.26□□□□□ -1.41
SF3B3-207ENST00000566095 OCIAD2Q56VL3 154 aa6.26□□□□□ -1.41
SF3B3-207ENST00000566095 LINC00167Q96N53 147 aa6.26□□□□□ -1.41
SF3B3-207ENST00000566095 TRAV23DV6A0A075B6W5 121 aa6.25□□□□□ -1.41
SF3B3-207ENST00000566095 SLC25A20O43772 301 aa6.25□□□□□ -1.41
SF3B3-207ENST00000566095 UBE2BP63146 152 aa6.25□□□□□ -1.41
SF3B3-207ENST00000566095 TEN1Q86WV5 123 aa6.25□□□□□ -1.41
SF3B3-207ENST00000566095 ANKRD29Q8N6D5 301 aa6.25□□□□□ -1.41
SF3B3-207ENST00000566095 C7orf33Q8WU49 177 aa6.25□□□□□ -1.41
SF3B3-207ENST00000566095 DIRC1Q969H9 104 aa6.25□□□□□ -1.41
SF3B3-207ENST00000566095 KRTAP3-3Q9BYR6 98 aa6.25□□□□□ -1.41
SF3B3-207ENST00000566095 KRTAP3-2Q9BYR7 98 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms