RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 Q6ZRP5 223 aa12.13□□□□□ -0.47
COMMD4-213ENST00000565834 NHP2Q9NX24 153 aaKnown RBP12.13□□□□□ -0.47
COMMD4-213ENST00000565834 LOC107984156A0A0G2JMH3 177 aa12.13□□□□□ -0.47
COMMD4-213ENST00000565834 LOC107984640A0A0U1RRK4 108 aa12.13□□□□□ -0.47
COMMD4-213ENST00000565834 GAGE2EQ4V326 116 aa12.13□□□□□ -0.47
COMMD4-213ENST00000565834 ARL17AQ8IVW1 177 aa12.13□□□□□ -0.47
COMMD4-213ENST00000565834 GAGE2DQ9UEU5 116 aa12.13□□□□□ -0.47
COMMD4-213ENST00000565834 XAGE1AQ9HD64 81 aa12.12□□□□□ -0.47
COMMD4-213ENST00000565834 C9orf163Q8N9P6 203 aa12.1□□□□□ -0.47
COMMD4-213ENST00000565834 A0A1B0GWB2 263 aa12.08□□□□□ -0.48
COMMD4-213ENST00000565834 K7ERJ3 54 aa12.08□□□□□ -0.48
COMMD4-213ENST00000565834 CFC1BP0CG36 223 aa12.08□□□□□ -0.48
COMMD4-213ENST00000565834 CFC1P0CG37 223 aa12.08□□□□□ -0.48
COMMD4-213ENST00000565834 GAGE2BQ13066 116 aa12.08□□□□□ -0.48
COMMD4-213ENST00000565834 PKIGQ9Y2B9 76 aa12.08□□□□□ -0.48
COMMD4-213ENST00000565834 GAGE10A6NGK3 116 aa12.07□□□□□ -0.48
COMMD4-213ENST00000565834 A0A0B4J2C4 111 aa12.06□□□□□ -0.48
COMMD4-213ENST00000565834 RAB37Q96AX2 223 aa12.06□□□□□ -0.48
COMMD4-213ENST00000565834 NDUFC2O95298 119 aa12.06□□□□□ -0.48
COMMD4-213ENST00000565834 HECTD4Q9Y4D8 3996 aa12.05□□□□□ -0.48
COMMD4-213ENST00000565834 C9orf129Q5T035 196 aaKnown RBP12.05□□□□□ -0.48
COMMD4-213ENST00000565834 RYR3Q15413 4870 aa12.04□□□□□ -0.48
COMMD4-213ENST00000565834 IGLV5-52A0A0A0MRZ9 124 aa12.04□□□□□ -0.48
COMMD4-213ENST00000565834 FABP2P12104 132 aa12.04□□□□□ -0.48
COMMD4-213ENST00000565834 LINC01620Q4KN68 170 aa12.04□□□□□ -0.48
COMMD4-213ENST00000565834 RYR2Q92736 4967 aa12.04□□□□□ -0.48
COMMD4-213ENST00000565834 C16orf90A8MZG2 172 aa12.03□□□□□ -0.48
COMMD4-213ENST00000565834 FUSP35637 526 aaKnown RBP eCLIP12.03□□□□□ -0.48
COMMD4-213ENST00000565834 Q8NDZ9 215 aa12.03□□□□□ -0.48
COMMD4-213ENST00000565834 IGKV2-28A0A075B6P5 120 aa12.03□□□□□ -0.48
COMMD4-213ENST00000565834 A0A096LNI7 61 aa12.03□□□□□ -0.48
COMMD4-213ENST00000565834 A0A1W2PPM0 123 aa12.03□□□□□ -0.48
COMMD4-213ENST00000565834 H3BUT2 72 aa12.03□□□□□ -0.48
COMMD4-213ENST00000565834 K7EP34 96 aa12.03□□□□□ -0.48
COMMD4-213ENST00000565834 IGKV2D-28P01615 120 aa12.03□□□□□ -0.48
COMMD4-213ENST00000565834 PRO1854Q9UHT4 67 aa12.03□□□□□ -0.48
COMMD4-213ENST00000565834 SDIM1Q6ZPB5 146 aa12.02□□□□□ -0.49
COMMD4-213ENST00000565834 IGKV2-24A0A0C4DH68 120 aa12.01□□□□□ -0.49
COMMD4-213ENST00000565834 LINC00336Q6ZUF6 198 aa12.01□□□□□ -0.49
COMMD4-213ENST00000565834 NCR3O14931 201 aa12□□□□□ -0.49
COMMD4-213ENST00000565834 PRR3P79522 188 aaKnown RBP12□□□□□ -0.49
COMMD4-213ENST00000565834 CBY1Q9Y3M2 126 aa12□□□□□ -0.49
COMMD4-213ENST00000565834 FAT2Q9NYQ8 4349 aa12□□□□□ -0.49
COMMD4-213ENST00000565834 TRAV13-2A0A0B4J235 113 aa12□□□□□ -0.49
COMMD4-213ENST00000565834 VPREB1P12018 145 aa12□□□□□ -0.49
COMMD4-213ENST00000565834 LINC00337Q8N6G1 96 aa12□□□□□ -0.49
COMMD4-213ENST00000565834 RPL13AP40429 203 aaKnown RBP11.99□□□□□ -0.49
COMMD4-213ENST00000565834 KRTAP10-2P60368 255 aa11.98□□□□□ -0.49
COMMD4-213ENST00000565834 PGPEP1Q9NXJ5 209 aa11.98□□□□□ -0.49
COMMD4-213ENST00000565834 PLA2G2DQ9UNK4 145 aa11.98□□□□□ -0.49
COMMD4-213ENST00000565834 SPCS1Q9Y6A9 102 aa11.97□□□□□ -0.49
COMMD4-213ENST00000565834 DNAH11Q96DT5 4516 aa11.97□□□□□ -0.49
COMMD4-213ENST00000565834 TRBV10-2A0A0K0K1G8 114 aa11.97□□□□□ -0.49
COMMD4-213ENST00000565834 FAM168BA1KXE4 195 aa11.97□□□□□ -0.49
COMMD4-213ENST00000565834 H7C2G1 150 aa11.97□□□□□ -0.49
COMMD4-213ENST00000565834 CHTF8P0CG12 524 aa11.97□□□□□ -0.49
COMMD4-213ENST00000565834 SERTAD4-AS1Q5TG53 156 aa11.97□□□□□ -0.49
COMMD4-213ENST00000565834 OR13C6PQ8NH95 151 aa11.97□□□□□ -0.49
COMMD4-213ENST00000565834 LINC00474Q9P2X8 69 aa11.97□□□□□ -0.49
COMMD4-213ENST00000565834 NKAPP1Q8N9T2 125 aa11.96□□□□□ -0.5
COMMD4-213ENST00000565834 TSPAN13O95857 204 aa11.95□□□□□ -0.5
COMMD4-213ENST00000565834 Q1RN00 199 aa11.95□□□□□ -0.5
COMMD4-213ENST00000565834 K7ERU9 68 aa11.94□□□□□ -0.5
COMMD4-213ENST00000565834 FAM19A5Q7Z5A7 132 aaPredicted RBP11.94□□□□□ -0.5
COMMD4-213ENST00000565834 M0R378 163 aa11.94□□□□□ -0.5
COMMD4-213ENST00000565834 S100A7L2Q5SY68 101 aa11.94□□□□□ -0.5
COMMD4-213ENST00000565834 IGLV5-37A0A075B6J1 123 aa11.93□□□□□ -0.5
COMMD4-213ENST00000565834 NAA38Q9BRA0 125 aaKnown RBP11.93□□□□□ -0.5
COMMD4-213ENST00000565834 TMEM126AQ9H061 195 aa11.93□□□□□ -0.5
COMMD4-213ENST00000565834 PKD1P98161 4303 aa11.92□□□□□ -0.5
COMMD4-213ENST00000565834 LYRM7Q5U5X0 104 aa11.91□□□□□ -0.5
COMMD4-213ENST00000565834 KRTAP7-1Q8IUC3 87 aa11.91□□□□□ -0.5
COMMD4-213ENST00000565834 OCIAD2Q56VL3 154 aa11.91□□□□□ -0.5
COMMD4-213ENST00000565834 SPACA4Q8TDM5 124 aa11.91□□□□□ -0.5
COMMD4-213ENST00000565834 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.91□□□□□ -0.5
COMMD4-213ENST00000565834 A0A1W2PNN7 141 aa11.9□□□□□ -0.5
COMMD4-213ENST00000565834 PANO1I0J062 215 aa11.9□□□□□ -0.5
COMMD4-213ENST00000565834 DPH3Q96FX2 82 aa11.9□□□□□ -0.5
COMMD4-213ENST00000565834 C22orf24Q9Y442 160 aa11.9□□□□□ -0.5
COMMD4-213ENST00000565834 TRBV10-3A0A0K0K1G6 114 aa11.89□□□□□ -0.51
COMMD4-213ENST00000565834 IGLV6-57P01721 117 aa11.89□□□□□ -0.51
COMMD4-213ENST00000565834 PSMB2P49721 201 aa11.88□□□□□ -0.51
COMMD4-213ENST00000565834 C7orf33Q8WU49 177 aa11.88□□□□□ -0.51
COMMD4-213ENST00000565834 DNAH5Q8TE73 4624 aa11.88□□□□□ -0.51
COMMD4-213ENST00000565834 F8W1H4 67 aa11.87□□□□□ -0.51
COMMD4-213ENST00000565834 M0QXV9 152 aa11.87□□□□□ -0.51
COMMD4-213ENST00000565834 MRPL55Q7Z7F7 128 aaKnown RBP11.87□□□□□ -0.51
COMMD4-213ENST00000565834 SMIM11BQ8TCY0 68 aa11.87□□□□□ -0.51
COMMD4-213ENST00000565834 RPL28P46779 137 aaKnown RBP11.85□□□□□ -0.51
COMMD4-213ENST00000565834 A0A1B0GVY2 172 aa11.84□□□□□ -0.51
COMMD4-213ENST00000565834 TRIAP1O43715 76 aa11.84□□□□□ -0.51
COMMD4-213ENST00000565834 LINC00167Q96N53 147 aa11.84□□□□□ -0.51
COMMD4-213ENST00000565834 TRAV23DV6A0A075B6W5 121 aa11.83□□□□□ -0.52
COMMD4-213ENST00000565834 A0A087WYN8 130 aa11.83□□□□□ -0.52
COMMD4-213ENST00000565834 COX6CP09669 75 aa11.82□□□□□ -0.52
COMMD4-213ENST00000565834 SCGB1C2P0DMR2 95 aa11.82□□□□□ -0.52
COMMD4-213ENST00000565834 KRTAP10-1P60331 282 aa11.82□□□□□ -0.52
COMMD4-213ENST00000565834 RPL37AP8A6NKH3 93 aa11.81□□□□□ -0.52
COMMD4-213ENST00000565834 IGLV1-50A0A075B6I6 118 aa11.81□□□□□ -0.52
COMMD4-213ENST00000565834 TRBV20-1A0A075B6N2 111 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms