RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 Q6ZVH6 145 aa7.17□□□□□ -1.26
SF3B3-205ENST00000564899 FLG2Q5D862 2391 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-205ENST00000564899 HMCN2Q8NDA2 5059 aa7.17□□□□□ -1.26
SF3B3-205ENST00000564899 RPL18AQ02543 176 aaKnown RBP7.16□□□□□ -1.26
SF3B3-205ENST00000564899 IGLV5-52A0A0A0MRZ9 124 aa7.15□□□□□ -1.26
SF3B3-205ENST00000564899 TLX1NBP0CAT3 122 aa7.15□□□□□ -1.26
SF3B3-205ENST00000564899 IFITM1P13164 125 aa7.15□□□□□ -1.26
SF3B3-205ENST00000564899 GCSHP23434 173 aa7.15□□□□□ -1.26
SF3B3-205ENST00000564899 MUSTN1Q8IVN3 82 aa7.15□□□□□ -1.26
SF3B3-205ENST00000564899 CEND1Q8N111 149 aa7.15□□□□□ -1.26
SF3B3-205ENST00000564899 LINC00308Q8TCZ7 52 aa7.15□□□□□ -1.26
SF3B3-205ENST00000564899 COPS9Q8WXC6 57 aa7.15□□□□□ -1.26
SF3B3-205ENST00000564899 LOC107984640A0A0U1RRK4 108 aa7.14□□□□□ -1.27
SF3B3-205ENST00000564899 GAGE2EQ4V326 116 aa7.14□□□□□ -1.27
SF3B3-205ENST00000564899 SOSTDC1Q6X4U4 206 aa7.14□□□□□ -1.27
SF3B3-205ENST00000564899 Q6ZRP5 223 aa7.14□□□□□ -1.27
SF3B3-205ENST00000564899 C9orf163Q8N9P6 203 aa7.14□□□□□ -1.27
SF3B3-205ENST00000564899 SND1-IT1Q9HBX3 110 aa7.14□□□□□ -1.27
SF3B3-205ENST00000564899 GAGE2DQ9UEU5 116 aa7.14□□□□□ -1.27
SF3B3-205ENST00000564899 PKIGQ9Y2B9 76 aa7.14□□□□□ -1.27
SF3B3-205ENST00000564899 M0R143 59 aa7.13□□□□□ -1.27
SF3B3-205ENST00000564899 FUSP35637 526 aaKnown RBP eCLIP7.13□□□□□ -1.27
SF3B3-205ENST00000564899 HINT1P49773 126 aaPredicted RBP7.13□□□□□ -1.27
SF3B3-205ENST00000564899 PTTG1IPP53801 180 aa7.13□□□□□ -1.27
SF3B3-205ENST00000564899 GAGE2BQ13066 116 aa7.13□□□□□ -1.27
SF3B3-205ENST00000564899 XAGE1AQ9HD64 81 aa7.13□□□□□ -1.27
SF3B3-205ENST00000564899 EIF4EBP3O60516 100 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-205ENST00000564899 FXYD2P54710 66 aa7.12□□□□□ -1.27
SF3B3-205ENST00000564899 RPL24P83731 157 aaKnown RBP7.12□□□□□ -1.27
SF3B3-205ENST00000564899 LINC01620Q4KN68 170 aa7.12□□□□□ -1.27
SF3B3-205ENST00000564899 BVES-AS1Q5T3Y7 98 aa7.12□□□□□ -1.27
SF3B3-205ENST00000564899 KRTAP10-2P60368 255 aa7.11□□□□□ -1.27
SF3B3-205ENST00000564899 BATFQ16520 125 aa7.11□□□□□ -1.27
SF3B3-205ENST00000564899 PPDPFQ9H3Y8 114 aa7.11□□□□□ -1.27
SF3B3-205ENST00000564899 A0A096LNI7 61 aa7.1□□□□□ -1.27
SF3B3-205ENST00000564899 LOC107984156A0A0G2JMH3 177 aa7.1□□□□□ -1.27
SF3B3-205ENST00000564899 TMEM238LA0A1B0GVL6 79 aa7.1□□□□□ -1.27
SF3B3-205ENST00000564899 A4D1N5 150 aa7.1□□□□□ -1.27
SF3B3-205ENST00000564899 A6NJY4 79 aa7.1□□□□□ -1.27
SF3B3-205ENST00000564899 C9orf129Q5T035 196 aaKnown RBP7.1□□□□□ -1.27
SF3B3-205ENST00000564899 ARL17AQ8IVW1 177 aa7.1□□□□□ -1.27
SF3B3-205ENST00000564899 PGPEP1Q9NXJ5 209 aa7.1□□□□□ -1.27
SF3B3-205ENST00000564899 IGKV2-24A0A0C4DH68 120 aa7.09□□□□□ -1.27
SF3B3-205ENST00000564899 SDIM1Q6ZPB5 146 aa7.09□□□□□ -1.27
SF3B3-205ENST00000564899 NHP2Q9NX24 153 aaKnown RBP7.08□□□□□ -1.28
SF3B3-205ENST00000564899 DNAH8Q96JB1 4490 aa7.07□□□□□ -1.28
SF3B3-205ENST00000564899 NDUFC2O95298 119 aa7.07□□□□□ -1.28
SF3B3-205ENST00000564899 CHTF8P0CG12 524 aa7.07□□□□□ -1.28
SF3B3-205ENST00000564899 Q8NDZ9 215 aa7.07□□□□□ -1.28
SF3B3-205ENST00000564899 SNHG12Q9BXW3 62 aa7.07□□□□□ -1.28
SF3B3-205ENST00000564899 LINC00474Q9P2X8 69 aa7.07□□□□□ -1.28
SF3B3-205ENST00000564899 A6NDN8 102 aa7.06□□□□□ -1.28
SF3B3-205ENST00000564899 NCR3O14931 201 aa7.06□□□□□ -1.28
SF3B3-205ENST00000564899 VPREB1P12018 145 aa7.06□□□□□ -1.28
SF3B3-205ENST00000564899 PLA2G2DQ9UNK4 145 aa7.06□□□□□ -1.28
SF3B3-205ENST00000564899 A0A0B4J2C4 111 aa7.05□□□□□ -1.28
SF3B3-205ENST00000564899 FAM168BA1KXE4 195 aa7.05□□□□□ -1.28
SF3B3-205ENST00000564899 K7ERJ3 54 aa7.05□□□□□ -1.28
SF3B3-205ENST00000564899 CFC1BP0CG36 223 aa7.05□□□□□ -1.28
SF3B3-205ENST00000564899 CFC1P0CG37 223 aa7.05□□□□□ -1.28
SF3B3-205ENST00000564899 INAFM2P0DMQ5 153 aa7.05□□□□□ -1.28
SF3B3-205ENST00000564899 SERTAD4-AS1Q5TG53 156 aa7.05□□□□□ -1.28
SF3B3-205ENST00000564899 RAB37Q96AX2 223 aa7.05□□□□□ -1.28
SF3B3-205ENST00000564899 IGKV2-28A0A075B6P5 120 aa7.04□□□□□ -1.28
SF3B3-205ENST00000564899 A0A1B0GWB2 263 aa7.04□□□□□ -1.28
SF3B3-205ENST00000564899 EPM2AB3EWF7 344 aa7.04□□□□□ -1.28
SF3B3-205ENST00000564899 PANO1I0J062 215 aa7.04□□□□□ -1.28
SF3B3-205ENST00000564899 IGKV2D-28P01615 120 aa7.04□□□□□ -1.28
SF3B3-205ENST00000564899 PRR3P79522 188 aaKnown RBP7.04□□□□□ -1.28
SF3B3-205ENST00000564899 FAM19A5Q7Z5A7 132 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-205ENST00000564899 NKAPP1Q8N9T2 125 aa7.04□□□□□ -1.28
SF3B3-205ENST00000564899 SPACA4Q8TDM5 124 aa7.04□□□□□ -1.28
SF3B3-205ENST00000564899 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-205ENST00000564899 TRAV13-2A0A0B4J235 113 aa7.03□□□□□ -1.28
SF3B3-205ENST00000564899 TRBV10-2A0A0K0K1G8 114 aa7.03□□□□□ -1.28
SF3B3-205ENST00000564899 DPH3Q96FX2 82 aa7.03□□□□□ -1.28
SF3B3-205ENST00000564899 LRP1Q07954 4544 aaKnown RBP7.02□□□□□ -1.29
SF3B3-205ENST00000564899 IGLV5-37A0A075B6J1 123 aa7.02□□□□□ -1.29
SF3B3-205ENST00000564899 A0A1W2PNN7 141 aa7.02□□□□□ -1.29
SF3B3-205ENST00000564899 RPL13AP40429 203 aaKnown RBP7.02□□□□□ -1.29
SF3B3-205ENST00000564899 XGP55808 180 aa7.02□□□□□ -1.29
SF3B3-205ENST00000564899 KRTAP10-1P60331 282 aa7.02□□□□□ -1.29
SF3B3-205ENST00000564899 KRTAP7-1Q8IUC3 87 aa7.02□□□□□ -1.29
SF3B3-205ENST00000564899 LINC00337Q8N6G1 96 aa7.02□□□□□ -1.29
SF3B3-205ENST00000564899 OR13C6PQ8NH95 151 aa7.02□□□□□ -1.29
SF3B3-205ENST00000564899 PRO1854Q9UHT4 67 aa7.02□□□□□ -1.29
SF3B3-205ENST00000564899 M0QXV9 152 aa7.01□□□□□ -1.29
SF3B3-205ENST00000564899 M0R378 163 aa7.01□□□□□ -1.29
SF3B3-205ENST00000564899 COL5A1-AS1Q5SY13 56 aa7.01□□□□□ -1.29
SF3B3-205ENST00000564899 S100A7L2Q5SY68 101 aa7.01□□□□□ -1.29
SF3B3-205ENST00000564899 Q5VSD8 79 aa7.01□□□□□ -1.29
SF3B3-205ENST00000564899 C22orf24Q9Y442 160 aa7.01□□□□□ -1.29
SF3B3-205ENST00000564899 H7C2G1 150 aa7□□□□□ -1.29
SF3B3-205ENST00000564899 C7orf33Q8WU49 177 aa7□□□□□ -1.29
SF3B3-205ENST00000564899 A0A087WYN8 130 aa6.99□□□□□ -1.29
SF3B3-205ENST00000564899 GAGE10A6NGK3 116 aa6.99□□□□□ -1.29
SF3B3-205ENST00000564899 Q1RN00 199 aa6.99□□□□□ -1.29
SF3B3-205ENST00000564899 MRPL55Q7Z7F7 128 aaKnown RBP6.99□□□□□ -1.29
SF3B3-205ENST00000564899 TMEM126AQ9H061 195 aa6.99□□□□□ -1.29
SF3B3-205ENST00000564899 RNF213Q63HN8 5207 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms