RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 LECT2O14960 151 aa14.25□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 MT-ATP8P03928 68 aa14.24□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 INAFM2P0DMQ5 153 aa14.24□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 HIGD2BQ4VC39 106 aa14.24□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 MRAPQ8TCY5 172 aa14.24□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 SNCGO76070 127 aa14.23□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 ACYP1P07311 99 aa14.23□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 C15orf56Q8N910 161 aa14.23□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 IGKV2D-24A0A075B6R9 120 aa14.22□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 Q8NDZ9 215 aa14.22□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 C22orf24Q9Y442 160 aa14.22□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 PKD1L1Q8TDX9 2849 aa14.22□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 ORMDL1Q9P0S3 153 aa14.2□□□□□ -0.14
VPS9D1-AS1-202ENST00000562866 LINC00167Q96N53 147 aa14.19□□□□□ -0.14
VPS9D1-AS1-202ENST00000562866 IGLV6-57P01721 117 aa14.18□□□□□ -0.14
VPS9D1-AS1-202ENST00000562866 LINC00588Q9Y4M8 146 aa14.18□□□□□ -0.14
VPS9D1-AS1-202ENST00000562866 Q6ZRU5 148 aa14.17□□□□□ -0.14
VPS9D1-AS1-202ENST00000562866 Q8N814 137 aa14.17□□□□□ -0.14
VPS9D1-AS1-202ENST00000562866 RPL18AQ02543 176 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-AS1-202ENST00000562866 C6orf99Q4VX62 202 aa14.17□□□□□ -0.14
VPS9D1-AS1-202ENST00000562866 XAGE1AQ9HD64 81 aa14.15□□□□□ -0.14
VPS9D1-AS1-202ENST00000562866 TENM3Q9P273 2699 aa14.15□□□□□ -0.14
VPS9D1-AS1-202ENST00000562866 NDUFC2-KCTD14E9PQ53 114 aa14.14□□□□□ -0.15
VPS9D1-AS1-202ENST00000562866 RMI2Q96E14 147 aa14.14□□□□□ -0.15
VPS9D1-AS1-202ENST00000562866 ANK2Q01484 3957 aa14.13□□□□□ -0.15
VPS9D1-AS1-202ENST00000562866 SLPIP03973 132 aa14.12□□□□□ -0.15
VPS9D1-AS1-202ENST00000562866 SYCNQ0VAF6 134 aa14.12□□□□□ -0.15
VPS9D1-AS1-202ENST00000562866 OBSCN-AS1Q96MR7 158 aa14.12□□□□□ -0.15
VPS9D1-AS1-202ENST00000562866 COL6A5A8TX70 2615 aa14.11□□□□□ -0.15
VPS9D1-AS1-202ENST00000562866 LINC00575Q6W349 94 aa14.11□□□□□ -0.15
VPS9D1-AS1-202ENST00000562866 UPK3BQ9BT76 320 aa14.11□□□□□ -0.15
VPS9D1-AS1-202ENST00000562866 TMEM256-PLSCR3K7ERE1 68 aa14.09□□□□□ -0.15
VPS9D1-AS1-202ENST00000562866 TRAV23DV6A0A075B6W5 121 aa14.09□□□□□ -0.15
VPS9D1-AS1-202ENST00000562866 TRBV10-3A0A0K0K1G6 114 aa14.09□□□□□ -0.15
VPS9D1-AS1-202ENST00000562866 VPREB1P12018 145 aa14.09□□□□□ -0.15
VPS9D1-AS1-202ENST00000562866 GAGE2BQ13066 116 aa14.08□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 GAGE2EQ4V326 116 aa14.08□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 GAGE2DQ9UEU5 116 aa14.08□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 M0R378 163 aa14.07□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 Q6Q795 121 aa14.07□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 DIRC1Q969H9 104 aa14.07□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 GAGE2AQ6NT46 116 aa14.06□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 hADV29S1A0JD25 119 aa14.06□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 JMJD7-PLA2G4BH0Y9G9 81 aa14.05□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 TTC32Q5I0X7 151 aa14.05□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 NOTCH1P46531 2555 aa14.05□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 TRBV7-6A0A0J9YX20 115 aa14.04□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 C14orf132Q9NPU4 83 aa14.04□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 H3BQ85 93 aa14.04□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 C9orf129Q5T035 196 aaKnown RBP14.03□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 Q6ZRP5 223 aa14.03□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 ZNF73O43830 326 aaPredicted RBP14.02□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 LINC00643Q86TS7 51 aa14.02□□□□□ -0.16
VPS9D1-AS1-202ENST00000562866 TLX1NBP0CAT3 122 aa14.01□□□□□ -0.17
VPS9D1-AS1-202ENST00000562866 MDFIQ99750 246 aa14.01□□□□□ -0.17
VPS9D1-AS1-202ENST00000562866 USP17L23D6RBM5 183 aa14.01□□□□□ -0.17
VPS9D1-AS1-202ENST00000562866 SDIM1Q6ZPB5 146 aa14.01□□□□□ -0.17
VPS9D1-AS1-202ENST00000562866 A0A1B0GV72 72 aa14□□□□□ -0.17
VPS9D1-AS1-202ENST00000562866 COX7BP24311 80 aa14□□□□□ -0.17
VPS9D1-AS1-202ENST00000562866 HUWE1Q7Z6Z7 4374 aaKnown RBP13.99□□□□□ -0.17
VPS9D1-AS1-202ENST00000562866 B9D2Q9BPU9 175 aa13.99□□□□□ -0.17
VPS9D1-AS1-202ENST00000562866 TRBV7-7A0A0K0K1E9 115 aa13.98□□□□□ -0.17
VPS9D1-AS1-202ENST00000562866 GHRHP01286 108 aa13.97□□□□□ -0.17
VPS9D1-AS1-202ENST00000562866 ELOF1P60002 83 aaKnown RBP13.96□□□□□ -0.17
VPS9D1-AS1-202ENST00000562866 SMCR5Q8TEV8 140 aa13.96□□□□□ -0.18
VPS9D1-AS1-202ENST00000562866 NKAPP1Q8N9T2 125 aa13.95□□□□□ -0.18
VPS9D1-AS1-202ENST00000562866 IMUPQ9GZP8 106 aa13.95□□□□□ -0.18
VPS9D1-AS1-202ENST00000562866 PLA2G2DQ9UNK4 145 aa13.95□□□□□ -0.18
VPS9D1-AS1-202ENST00000562866 NBEAL1Q6ZS30 2694 aa13.94□□□□□ -0.18
VPS9D1-AS1-202ENST00000562866 CCKP06307 115 aa13.94□□□□□ -0.18
VPS9D1-AS1-202ENST00000562866 CASC10Q5T4H9 136 aa13.94□□□□□ -0.18
VPS9D1-AS1-202ENST00000562866 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.94□□□□□ -0.18
VPS9D1-AS1-202ENST00000562866 Q6ZQY7 126 aa13.92□□□□□ -0.18
VPS9D1-AS1-202ENST00000562866 UBE2DNLQ8IWF7 75 aa13.9□□□□□ -0.18
VPS9D1-AS1-202ENST00000562866 APLNQ9ULZ1 77 aa13.89□□□□□ -0.19
VPS9D1-AS1-202ENST00000562866 NDUFV3P56181 108 aaKnown RBP13.88□□□□□ -0.19
VPS9D1-AS1-202ENST00000562866 ANAPC13Q9BS18 74 aa13.88□□□□□ -0.19
VPS9D1-AS1-202ENST00000562866 LAMTOR3Q9UHA4 124 aa13.88□□□□□ -0.19
VPS9D1-AS1-202ENST00000562866 IGLV5-37A0A075B6J1 123 aa13.88□□□□□ -0.19
VPS9D1-AS1-202ENST00000562866 RBM3P98179 157 aaKnown RBP13.88□□□□□ -0.19
VPS9D1-AS1-202ENST00000562866 KCNQ1DNQ9H478 68 aa13.88□□□□□ -0.19
VPS9D1-AS1-202ENST00000562866 SERTAD4-AS1Q5TG53 156 aa13.87□□□□□ -0.19
VPS9D1-AS1-202ENST00000562866 LOC107984640A0A0U1RRK4 108 aa13.86□□□□□ -0.19
VPS9D1-AS1-202ENST00000562866 LINC00528Q8N1L1 170 aa13.86□□□□□ -0.19
VPS9D1-AS1-202ENST00000562866 C7orf33Q8WU49 177 aa13.86□□□□□ -0.19
VPS9D1-AS1-202ENST00000562866 NHLRC4P0CG21 123 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-AS1-202ENST00000562866 LINC00846Q9NV44 126 aa13.86□□□□□ -0.19
VPS9D1-AS1-202ENST00000562866 LOC110117498A0A087WWA1 95 aa13.85□□□□□ -0.19
VPS9D1-AS1-202ENST00000562866 MGAM2Q2M2H8 2515 aa13.85□□□□□ -0.19
VPS9D1-AS1-202ENST00000562866 PDE6GP18545 87 aa13.83□□□□□ -0.19
VPS9D1-AS1-202ENST00000562866 Q6JHZ5 121 aa13.83□□□□□ -0.2
VPS9D1-AS1-202ENST00000562866 DSCR8Q96T75 97 aa13.81□□□□□ -0.2
VPS9D1-AS1-202ENST00000562866 KRTAP1-5Q9BYS1 174 aa13.81□□□□□ -0.2
VPS9D1-AS1-202ENST00000562866 NUPR2A6NF83 97 aa13.8□□□□□ -0.2
VPS9D1-AS1-202ENST00000562866 PRYO14603 147 aa13.8□□□□□ -0.2
VPS9D1-AS1-202ENST00000562866 PSCAO43653 123 aa13.8□□□□□ -0.2
VPS9D1-AS1-202ENST00000562866 Q6ZQT0 140 aa13.8□□□□□ -0.2
VPS9D1-AS1-202ENST00000562866 DNAH1Q9P2D7 4330 aa13.79□□□□□ -0.2
VPS9D1-AS1-202ENST00000562866 C14orf177Q52M58 125 aa13.77□□□□□ -0.21
VPS9D1-AS1-202ENST00000562866 IGLV1-50A0A075B6I6 118 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms