RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 TMEM238C9JI98 176 aa7.94□□□□□ -1.14
USB1-205ENST00000561743 PRLHP81277 87 aa7.94□□□□□ -1.14
USB1-205ENST00000561743 PRR4Q16378 134 aa7.94□□□□□ -1.14
USB1-205ENST00000561743 TYMSOSQ8TAI1 123 aa7.94□□□□□ -1.14
USB1-205ENST00000561743 TMEM126AQ9H061 195 aa7.94□□□□□ -1.14
USB1-205ENST00000561743 TSPAN13O95857 204 aa7.93□□□□□ -1.14
USB1-205ENST00000561743 KRTAP13-2Q52LG2 175 aa7.93□□□□□ -1.14
USB1-205ENST00000561743 CBLN2Q8IUK8 224 aa7.93□□□□□ -1.14
USB1-205ENST00000561743 M0R378 163 aa7.92□□□□□ -1.14
USB1-205ENST00000561743 LINC00158P58513 81 aa7.92□□□□□ -1.14
USB1-205ENST00000561743 FAM19A1Q7Z5A9 133 aa7.92□□□□□ -1.14
USB1-205ENST00000561743 FAM229BQ4G0N7 80 aa7.91□□□□□ -1.14
USB1-205ENST00000561743 FAM19A2Q8N3H0 131 aa7.91□□□□□ -1.14
USB1-205ENST00000561743 A0A0U1RRA0 63 aa7.9□□□□□ -1.14
USB1-205ENST00000561743 HSBP1O75506 76 aa7.9□□□□□ -1.14
USB1-205ENST00000561743 TRGC2P03986 189 aa7.88□□□□□ -1.15
USB1-205ENST00000561743 SMIM13P0DJ93 91 aa7.88□□□□□ -1.15
USB1-205ENST00000561743 LINC00310P59036 64 aa7.88□□□□□ -1.15
USB1-205ENST00000561743 H0Y8G0 127 aa7.86□□□□□ -1.15
USB1-205ENST00000561743 MEIG1Q5JSS6 88 aa7.86□□□□□ -1.15
USB1-205ENST00000561743 PLEKHB2Q96CS7 222 aa7.86□□□□□ -1.15
USB1-205ENST00000561743 IGKV2D-26A0A0A0MRZ7 120 aa7.85□□□□□ -1.15
USB1-205ENST00000561743 SERF1AO75920 110 aa7.85□□□□□ -1.15
USB1-205ENST00000561743 HERV-K104P63124 156 aa7.85□□□□□ -1.15
USB1-205ENST00000561743 BOD1L2Q8IYS8 172 aa7.85□□□□□ -1.15
USB1-205ENST00000561743 MIR7-3HGQ8N6C7 128 aa7.85□□□□□ -1.15
USB1-205ENST00000561743 LINC00304Q8N9R0 145 aa7.85□□□□□ -1.15
USB1-205ENST00000561743 HIGD2AQ9BW72 106 aa7.85□□□□□ -1.15
USB1-205ENST00000561743 NDUFA12Q9UI09 145 aa7.85□□□□□ -1.15
USB1-205ENST00000561743 NCR3O14931 201 aa7.84□□□□□ -1.15
USB1-205ENST00000561743 LEPROTL1O95214 131 aa7.84□□□□□ -1.15
USB1-205ENST00000561743 TSPEAR-AS2P59090 65 aa7.84□□□□□ -1.15
USB1-205ENST00000561743 MYMXA0A1B0GTQ4 84 aa7.83□□□□□ -1.16
USB1-205ENST00000561743 PRYO14603 147 aa7.83□□□□□ -1.16
USB1-205ENST00000561743 MUC2Q02817 5179 aa7.82□□□□□ -1.16
USB1-205ENST00000561743 LINC00587B1AMM8 73 aa7.82□□□□□ -1.16
USB1-205ENST00000561743 PLNP26678 52 aa7.82□□□□□ -1.16
USB1-205ENST00000561743 C3orf22Q8N5N4 141 aa7.82□□□□□ -1.16
USB1-205ENST00000561743 RETNLBQ9BQ08 111 aa7.82□□□□□ -1.16
USB1-205ENST00000561743 LEPROTO15243 131 aa7.81□□□□□ -1.16
USB1-205ENST00000561743 SPRR1AP35321 89 aa7.81□□□□□ -1.16
USB1-205ENST00000561743 SPRR4Q96PI1 79 aa7.81□□□□□ -1.16
USB1-205ENST00000561743 KCNQ1DNQ9H478 68 aa7.81□□□□□ -1.16
USB1-205ENST00000561743 KRTAP4-16G5E9R7 235 aaPredicted RBP7.8□□□□□ -1.16
USB1-205ENST00000561743 LINC00337Q8N6G1 96 aa7.8□□□□□ -1.16
USB1-205ENST00000561743 DAND5Q8N907 189 aa7.8□□□□□ -1.16
USB1-205ENST00000561743 MAP1LC3CQ9BXW4 147 aa7.8□□□□□ -1.16
USB1-205ENST00000561743 HSPB8Q9UJY1 196 aa7.8□□□□□ -1.16
USB1-205ENST00000561743 TRBV10-3A0A0K0K1G6 114 aa7.79□□□□□ -1.16
USB1-205ENST00000561743 COLCA2A8K830 154 aa7.79□□□□□ -1.16
USB1-205ENST00000561743 J3QQQ9 107 aa7.79□□□□□ -1.16
USB1-205ENST00000561743 DPM2O94777 84 aa7.79□□□□□ -1.16
USB1-205ENST00000561743 FABP4P15090 132 aa7.79□□□□□ -1.16
USB1-205ENST00000561743 PMCHL2Q9BQD1 86 aa7.79□□□□□ -1.16
USB1-205ENST00000561743 LOC107984156A0A0G2JMH3 177 aa7.78□□□□□ -1.16
USB1-205ENST00000561743 CTAG1AP78358 180 aa7.78□□□□□ -1.16
USB1-205ENST00000561743 ARL17AQ8IVW1 177 aa7.78□□□□□ -1.16
USB1-205ENST00000561743 ZNF706Q9Y5V0 76 aaPredicted RBP7.78□□□□□ -1.16
USB1-205ENST00000561743 ETDCA0A1B0GVM5 59 aa7.77□□□□□ -1.17
USB1-205ENST00000561743 IGKCP01834 107 aa7.77□□□□□ -1.17
USB1-205ENST00000561743 NMUP48645 174 aa7.76□□□□□ -1.17
USB1-205ENST00000561743 HERVK_113P61574 105 aa7.76□□□□□ -1.17
USB1-205ENST00000561743 SMCR5Q8TEV8 140 aa7.76□□□□□ -1.17
USB1-205ENST00000561743 TRBV10-2A0A0K0K1G8 114 aa7.75□□□□□ -1.17
USB1-205ENST00000561743 LGALS3P17931 250 aaKnown RBP7.75□□□□□ -1.17
USB1-205ENST00000561743 LCE2DQ5TA82 110 aaPredicted RBP7.75□□□□□ -1.17
USB1-205ENST00000561743 B5MCH6 92 aa7.74□□□□□ -1.17
USB1-205ENST00000561743 DDTP30046 118 aa7.74□□□□□ -1.17
USB1-205ENST00000561743 TPRXLQ17RH7 258 aa7.74□□□□□ -1.17
USB1-205ENST00000561743 SPAG11AQ6PDA7 123 aa7.74□□□□□ -1.17
USB1-205ENST00000561743 IGLV7-46A0A075B6I9 117 aa7.73□□□□□ -1.17
USB1-205ENST00000561743 S100A12P80511 92 aa7.73□□□□□ -1.17
USB1-205ENST00000561743 PPDPFQ9H3Y8 114 aa7.73□□□□□ -1.17
USB1-205ENST00000561743 SPANXB1Q9NS25 103 aaPredicted RBP7.73□□□□□ -1.17
USB1-205ENST00000561743 LINC00483Q53H64 154 aa7.72□□□□□ -1.17
USB1-205ENST00000561743 Q8NBF4 154 aa7.72□□□□□ -1.17
USB1-205ENST00000561743 MIEN1Q9BRT3 115 aa7.72□□□□□ -1.17
USB1-205ENST00000561743 A0A0J9YXY3 114 aa7.71□□□□□ -1.18
USB1-205ENST00000561743 EIF4EBP3O60516 100 aaPredicted RBP7.71□□□□□ -1.18
USB1-205ENST00000561743 ERC2-IT1O76042 136 aa7.71□□□□□ -1.18
USB1-205ENST00000561743 NDUFC2O95298 119 aa7.71□□□□□ -1.18
USB1-205ENST00000561743 ADAMTSL4-AS1Q5T5F5 129 aa7.71□□□□□ -1.18
USB1-205ENST00000561743 SOSTDC1Q6X4U4 206 aa7.71□□□□□ -1.18
USB1-205ENST00000561743 Q9BRP9 147 aa7.71□□□□□ -1.18
USB1-205ENST00000561743 E9PLD3 99 aa7.7□□□□□ -1.18
USB1-205ENST00000561743 HIST1H2BKO60814 126 aa7.7□□□□□ -1.18
USB1-205ENST00000561743 IGLV6-57P01721 117 aa7.7□□□□□ -1.18
USB1-205ENST00000561743 HIST1H2BJP06899 126 aa7.7□□□□□ -1.18
USB1-205ENST00000561743 HIST1H2BOP23527 126 aa7.7□□□□□ -1.18
USB1-205ENST00000561743 HIST1H2BBP33778 126 aa7.7□□□□□ -1.18
USB1-205ENST00000561743 HIST1H2BDP58876 126 aa7.7□□□□□ -1.18
USB1-205ENST00000561743 HIST1H2BCP62807 126 aa7.7□□□□□ -1.18
USB1-205ENST00000561743 HIST2H2BEQ16778 126 aa7.7□□□□□ -1.18
USB1-205ENST00000561743 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.7□□□□□ -1.18
USB1-205ENST00000561743 Q6ZRX8 168 aa7.7□□□□□ -1.18
USB1-205ENST00000561743 HIST1H2BHQ93079 126 aa7.7□□□□□ -1.18
USB1-205ENST00000561743 HIST1H2BNQ99877 126 aa7.7□□□□□ -1.18
USB1-205ENST00000561743 HIST1H2BMQ99879 126 aa7.7□□□□□ -1.18
USB1-205ENST00000561743 CDIP1Q9H305 208 aa7.7□□□□□ -1.18
USB1-205ENST00000561743 SYS1-DBNDD2H3BUS1 97 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms