RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 TMEM223A0PJW6 202 aa14.89□□□□□ -0.03
NME3-202ENST00000561637 PRLHP81277 87 aa14.89□□□□□ -0.03
NME3-202ENST00000561637 TSPAN13O95857 204 aa14.88□□□□□ -0.03
NME3-202ENST00000561637 LCE2AQ5TA79 106 aaPredicted RBP14.88□□□□□ -0.03
NME3-202ENST00000561637 A0A0U1RQV1 116 aa14.87□□□□□ -0.03
NME3-202ENST00000561637 TRAV12-1A0A0B4J245 112 aa14.86□□□□□ -0.03
NME3-202ENST00000561637 COX17Q14061 63 aa14.86□□□□□ -0.03
NME3-202ENST00000561637 PRR4Q16378 134 aa14.86□□□□□ -0.03
NME3-202ENST00000561637 KRTAP13-2Q52LG2 175 aa14.86□□□□□ -0.03
NME3-202ENST00000561637 TMEM126AQ9H061 195 aa14.86□□□□□ -0.03
NME3-202ENST00000561637 LINC00310P59036 64 aa14.85□□□□□ -0.03
NME3-202ENST00000561637 M0R378 163 aa14.84□□□□□ -0.03
NME3-202ENST00000561637 CRYGAP11844 174 aa14.84□□□□□ -0.03
NME3-202ENST00000561637 LINC00158P58513 81 aa14.84□□□□□ -0.03
NME3-202ENST00000561637 TRGC2P03986 189 aa14.83□□□□□ -0.04
NME3-202ENST00000561637 FAM19A1Q7Z5A9 133 aa14.83□□□□□ -0.04
NME3-202ENST00000561637 RPL24P83731 157 aaKnown RBP14.82□□□□□ -0.04
NME3-202ENST00000561637 TYMSOSQ8TAI1 123 aa14.82□□□□□ -0.04
NME3-202ENST00000561637 H0Y8G0 127 aa14.81□□□□□ -0.04
NME3-202ENST00000561637 HSBP1O75506 76 aa14.81□□□□□ -0.04
NME3-202ENST00000561637 SMIM13P0DJ93 91 aa14.81□□□□□ -0.04
NME3-202ENST00000561637 SFTA2Q6UW10 78 aa14.79□□□□□ -0.04
NME3-202ENST00000561637 SLC7A5P1Q8MH63 180 aa14.79□□□□□ -0.04
NME3-202ENST00000561637 SERF1AO75920 110 aa14.78□□□□□ -0.04
NME3-202ENST00000561637 TSPEAR-AS2P59090 65 aa14.76□□□□□ -0.05
NME3-202ENST00000561637 MIR7-3HGQ8N6C7 128 aa14.74□□□□□ -0.05
NME3-202ENST00000561637 MEIG1Q5JSS6 88 aa14.73□□□□□ -0.05
NME3-202ENST00000561637 NDUFA12Q9UI09 145 aa14.73□□□□□ -0.05
NME3-202ENST00000561637 NCR3O14931 201 aa14.72□□□□□ -0.05
NME3-202ENST00000561637 FAM229BQ4G0N7 80 aa14.72□□□□□ -0.05
NME3-202ENST00000561637 BOD1L2Q8IYS8 172 aa14.72□□□□□ -0.05
NME3-202ENST00000561637 PLEKHB2Q96CS7 222 aa14.71□□□□□ -0.05
NME3-202ENST00000561637 LEPROTL1O95214 131 aa14.7□□□□□ -0.06
NME3-202ENST00000561637 PMCHL2Q9BQD1 86 aa14.7□□□□□ -0.06
NME3-202ENST00000561637 HIGD2AQ9BW72 106 aa14.7□□□□□ -0.06
NME3-202ENST00000561637 RETNLBQ9BQ08 111 aa14.69□□□□□ -0.06
NME3-202ENST00000561637 FABP4P15090 132 aa14.68□□□□□ -0.06
NME3-202ENST00000561637 C3orf22Q8N5N4 141 aa14.68□□□□□ -0.06
NME3-202ENST00000561637 COLCA2A8K830 154 aa14.67□□□□□ -0.06
NME3-202ENST00000561637 ATP6V1G1O75348 118 aa14.67□□□□□ -0.06
NME3-202ENST00000561637 DAND5Q8N907 189 aa14.67□□□□□ -0.06
NME3-202ENST00000561637 HERV-K104P63124 156 aa14.66□□□□□ -0.06
NME3-202ENST00000561637 LINC00304Q8N9R0 145 aa14.66□□□□□ -0.06
NME3-202ENST00000561637 IGKV2D-26A0A0A0MRZ7 120 aa14.65□□□□□ -0.06
NME3-202ENST00000561637 MYMXA0A1B0GTQ4 84 aa14.64□□□□□ -0.07
NME3-202ENST00000561637 LEPROTO15243 131 aa14.63□□□□□ -0.07
NME3-202ENST00000561637 SPRR4Q96PI1 79 aa14.62□□□□□ -0.07
NME3-202ENST00000561637 TRBV10-3A0A0K0K1G6 114 aa14.61□□□□□ -0.07
NME3-202ENST00000561637 PRYO14603 147 aa14.61□□□□□ -0.07
NME3-202ENST00000561637 KRTAP4-16G5E9R7 235 aaPredicted RBP14.59□□□□□ -0.07
NME3-202ENST00000561637 J3QQQ9 107 aa14.59□□□□□ -0.07
NME3-202ENST00000561637 DPM2O94777 84 aa14.59□□□□□ -0.07
NME3-202ENST00000561637 PLNP26678 52 aa14.59□□□□□ -0.07
NME3-202ENST00000561637 SPRR1AP35321 89 aa14.59□□□□□ -0.07
NME3-202ENST00000561637 KCNQ1DNQ9H478 68 aa14.59□□□□□ -0.07
NME3-202ENST00000561637 HSPB8Q9UJY1 196 aa14.59□□□□□ -0.07
NME3-202ENST00000561637 IGKCP01834 107 aa14.56□□□□□ -0.08
NME3-202ENST00000561637 LINC00337Q8N6G1 96 aa14.55□□□□□ -0.08
NME3-202ENST00000561637 SMCR5Q8TEV8 140 aa14.55□□□□□ -0.08
NME3-202ENST00000561637 MAP1LC3CQ9BXW4 147 aa14.55□□□□□ -0.08
NME3-202ENST00000561637 MUC17Q685J3 4493 aa14.55□□□□□ -0.08
NME3-202ENST00000561637 LINC00587B1AMM8 73 aa14.54□□□□□ -0.08
NME3-202ENST00000561637 PPDPFQ9H3Y8 114 aa14.54□□□□□ -0.08
NME3-202ENST00000561637 EIF4EBP3O60516 100 aaPredicted RBP14.53□□□□□ -0.08
NME3-202ENST00000561637 ETDCA0A1B0GVM5 59 aa14.52□□□□□ -0.09
NME3-202ENST00000561637 LGALS3P17931 250 aaKnown RBP14.52□□□□□ -0.09
NME3-202ENST00000561637 HERVK_113P61574 105 aa14.52□□□□□ -0.09
NME3-202ENST00000561637 LOC107984156A0A0G2JMH3 177 aa14.51□□□□□ -0.09
NME3-202ENST00000561637 SOSTDC1Q6X4U4 206 aa14.51□□□□□ -0.09
NME3-202ENST00000561637 ARL17AQ8IVW1 177 aa14.51□□□□□ -0.09
NME3-202ENST00000561637 ERC2-IT1O76042 136 aa14.5□□□□□ -0.09
NME3-202ENST00000561637 NPC2P61916 151 aa14.49□□□□□ -0.09
NME3-202ENST00000561637 B5MCH6 92 aa14.48□□□□□ -0.09
NME3-202ENST00000561637 DDTP30046 118 aa14.48□□□□□ -0.09
NME3-202ENST00000561637 ADAMTSL4-AS1Q5T5F5 129 aa14.48□□□□□ -0.09
NME3-202ENST00000561637 HIST1H2BKO60814 126 aa14.47□□□□□ -0.09
NME3-202ENST00000561637 HIST1H2BJP06899 126 aa14.47□□□□□ -0.09
NME3-202ENST00000561637 HIST1H2BOP23527 126 aa14.47□□□□□ -0.09
NME3-202ENST00000561637 HIST1H2BBP33778 126 aa14.47□□□□□ -0.09
NME3-202ENST00000561637 NMUP48645 174 aa14.47□□□□□ -0.09
NME3-202ENST00000561637 HIST1H2BDP58876 126 aa14.47□□□□□ -0.09
NME3-202ENST00000561637 HIST1H2BCP62807 126 aa14.47□□□□□ -0.09
NME3-202ENST00000561637 HIST2H2BEQ16778 126 aa14.47□□□□□ -0.09
NME3-202ENST00000561637 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.47□□□□□ -0.09
NME3-202ENST00000561637 HIST1H2BHQ93079 126 aa14.47□□□□□ -0.09
NME3-202ENST00000561637 HIST1H2BNQ99877 126 aa14.47□□□□□ -0.09
NME3-202ENST00000561637 HIST1H2BMQ99879 126 aa14.47□□□□□ -0.09
NME3-202ENST00000561637 ZNF706Q9Y5V0 76 aaPredicted RBP14.47□□□□□ -0.09
NME3-202ENST00000561637 A0A0J9YXY3 114 aa14.45□□□□□ -0.1
NME3-202ENST00000561637 IGLV7-46A0A075B6I9 117 aa14.44□□□□□ -0.1
NME3-202ENST00000561637 TRBV10-2A0A0K0K1G8 114 aa14.44□□□□□ -0.1
NME3-202ENST00000561637 Q8NBF4 154 aa14.44□□□□□ -0.1
NME3-202ENST00000561637 Q9BRP9 147 aa14.44□□□□□ -0.1
NME3-202ENST00000561637 SPANXB1Q9NS25 103 aaPredicted RBP14.44□□□□□ -0.1
NME3-202ENST00000561637 E9PLD3 99 aa14.43□□□□□ -0.1
NME3-202ENST00000561637 SYS1-DBNDD2H3BUS1 97 aa14.43□□□□□ -0.1
NME3-202ENST00000561637 GAGE2AQ6NT46 116 aa14.42□□□□□ -0.1
NME3-202ENST00000561637 IGLV6-57P01721 117 aa14.41□□□□□ -0.1
NME3-202ENST00000561637 LINC00483Q53H64 154 aa14.41□□□□□ -0.1
NME3-202ENST00000561637 MIEN1Q9BRT3 115 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms